/usr/share/pyshared/sympy/polys/groebnertools.py is in python-sympy 0.7.1.rc1-2.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
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from sympy.core.compatibility import cmp
from sympy.polys.monomialtools import (
monomial_mul,
monomial_div,
monomial_lcm,
monomial_lex_key as O_lex,
monomial_grlex_key as O_grlex,
monomial_grevlex_key as O_grevlex,
)
from sympy.polys.polyerrors import (
ExactQuotientFailed, DomainError,
)
from operator import itemgetter
def sdp_LC(f, K):
"""Returns the leading coeffcient of `f`. """
if not f:
return K.zero
else:
return f[0][1]
def sdp_LM(f, u):
"""Returns the leading monomial of `f`. """
if not f:
return (0,)*(u+1)
else:
return f[0][0]
def sdp_LT(f, u, K):
"""Returns the leading term of `f`. """
if f:
return f[0]
else:
return (0,)*(u+1), K.zero
def sdp_del_LT(f):
"""Removes the leading from `f`. """
return f[1:]
def sdp_coeffs(f):
"""Returns a list of monomials in `f`. """
return [ coeff for _, coeff in f ]
def sdp_monoms(f):
"""Returns a list of monomials in `f`. """
return [ monom for monom, _ in f ]
def sdp_sort(f, O):
"""Sort terms in `f` using the given monomial order `O`. """
return sorted(f, key=lambda term: O(term[0]), reverse=True)
def sdp_strip(f):
"""Remove terms with zero coefficients from `f` in `K[X]`. """
return [ (monom, coeff) for monom, coeff in f if coeff ]
def sdp_normal(f, K):
"""Normalize distributed polynomial in the given domain. """
return [ (monom, K.convert(coeff)) for monom, coeff in f if coeff ]
def sdp_from_dict(f, O):
"""Make a distributed polynomial from a dictionary. """
return sdp_sort(f.items(), O)
def sdp_to_dict(f):
"""Make a dictionary from a distributed polynomial. """
return dict(f)
def sdp_indep_p(f, j, u):
"""Returns `True` if a polynomial is independent of `x_j`. """
if j < 0 or j > u:
raise IndexError("-%s <= j < %s expected, got %s" % (u, u, j))
else:
return all(not monom[j] for monom in sdp_monoms(h))
def sdp_one_p(f, u, K):
"""Returns True if `f` is a multivariate one in `K[X]`. """
return f == sdp_one(u, K)
def sdp_one(u, K):
"""Returns a multivariate one in `K[X]`. """
return (((0,)*(u+1), K.one),)
def sdp_term_p(f):
"""Returns True if `f` has a single term or is zero. """
return len(f) <= 1
def sdp_abs(f, u, O, K):
"""Make all coefficients positive in `K[X]`. """
return [ (monom, K.abs(coeff)) for monom, coeff in f ]
def sdp_neg(f, u, O, K):
"""Negate a polynomial in `K[X]`. """
return [ (monom, -coeff) for monom, coeff in f ]
def sdp_add_term(f, term, u, O, K):
"""Add a single term using bisection method. """
M, c = term
if not c:
return f
if not f:
return [(M, c)]
monoms = sdp_monoms(f)
if cmp(O(M), O(monoms[ 0])) > 0:
return [(M, c)] + f
if cmp(O(M), O(monoms[-1])) < 0:
return f + [(M, c)]
lo, hi = 0, len(monoms)-1
while lo <= hi:
i = (lo + hi) // 2
j = cmp(O(M), O(monoms[i]))
if not j:
coeff = f[i][1] + c
if not coeff:
return f[:i] + f[i+1:]
else:
return f[:i] + [(M, coeff)] + f[i+1:]
else:
if j > 0:
hi = i - 1
else:
lo = i + 1
else:
return f[:i] + [(M, c)] + f[i+1:]
def sdp_sub_term(f, term, u, O, K):
"""Sub a single term using bisection method. """
M, c = term
if not c:
return f
if not f:
return [(M, -c)]
monoms = sdp_monoms(f)
if cmp(O(M), O(monoms[ 0])) > 0:
return [(M, -c)] + f
if cmp(O(M), O(monoms[-1])) < 0:
return f + [(M, -c)]
lo, hi = 0, len(monoms)-1
while lo <= hi:
i = (lo + hi) // 2
j = cmp(O(M), O(monoms[i]))
if not j:
coeff = f[i][1] - c
if not coeff:
return f[:i] + f[i+1:]
else:
return f[:i] + [(M, coeff)] + f[i+1:]
else:
if j > 0:
hi = i - 1
else:
lo = i + 1
else:
return f[:i] + [(M, -c)] + f[i+1:]
def sdp_mul_term(f, term, u, O, K):
"""Multiply a distributed polynomial by a term. """
M, c = term
if not f or not c:
return []
else:
if K.is_one(c):
return [ (monomial_mul(f_M, M), f_c) for f_M, f_c in f ]
else:
return [ (monomial_mul(f_M, M), f_c*c) for f_M, f_c in f ]
def sdp_add(f, g, u, O, K):
"""Add distributed polynomials in `K[X]`. """
h = dict(f)
for monom, c in g:
if monom in h:
coeff = h[monom] + c
if not coeff:
del h[monom]
else:
h[monom] = coeff
else:
h[monom] = c
return sdp_from_dict(h, O)
def sdp_sub(f, g, u, O, K):
"""Subtract distributed polynomials in `K[X]`. """
h = dict(f)
for monom, c in g:
if monom in h:
coeff = h[monom] - c
if not coeff:
del h[monom]
else:
h[monom] = coeff
else:
h[monom] = -c
return sdp_from_dict(h, O)
def sdp_mul(f, g, u, O, K):
"""Multiply distributed polynomials in `K[X]`. """
if sdp_term_p(f):
if not f:
return f
else:
return sdp_mul_term(g, f[0], u, O, K)
if sdp_term_p(g):
if not g:
return g
else:
return sdp_mul_term(f, g[0], u, O, K)
h = {}
for fm, fc in f:
for gm, gc in g:
monom = monomial_mul(fm, gm)
coeff = fc*gc
if monom in h:
coeff += h[monom]
if not coeff:
del h[monom]
continue
h[monom] = coeff
return sdp_from_dict(h, O)
def sdp_sqr(f, u, O, K):
"""Square a distributed polynomial in `K[X]`. """
h = {}
for fm, fc in f:
for Fm, Fc in f:
monom = monomial_mul(fm, Fm)
coeff = fc*Fc
if monom in h:
coeff += h[monom]
if not coeff:
del h[monom]
continue
h[monom] = coeff
return sdp_from_dict(h, O)
def sdp_pow(f, n, u, O, K):
"""Raise `f` to the n-th power in `K[X]`. """
if not n:
return sdp_one(u, K)
if n < 0:
raise ValueError("can't raise a polynomial to negative power")
if n == 1 or not f or sdp_one_p(f, u, K):
return f
g = sdp_one(u, K)
while True:
n, m = n//2, n
if m & 1:
g = sdp_mul(g, f, u, O, K)
if not n:
break
f = sdp_sqr(f, u, O, K)
return g
def sdp_monic(f, K):
"""Divides all coefficients by `LC(f)` in `K[X]`. """
if not f:
return f
lc_f = sdp_LC(f, K)
if K.is_one(lc_f):
return f
else:
return [ (m, K.quo(c, lc_f)) for m, c in f ]
def sdp_content(f, K):
"""Returns GCD of coefficients in `K[X]`. """
if K.has_Field:
return K.one
else:
cont = K.zero
for _, c in f:
cont = K.gcd(cont, c)
if K.is_one(cont):
break
return cont
def sdp_primitive(f, K):
"""Returns content and a primitive polynomial in `K[X]`. """
if K.has_Field:
return K.one, f
else:
cont = sdp_content(f, K)
if K.is_one(cont):
return cont, f
else:
return cont, [ (m, K.quo(c, cont)) for m, c in f ]
def _term_rr_div(a, b, K):
"""Division of two terms in over a ring. """
a_lm, a_lc = a
b_lm, b_lc = b
monom = monomial_div(a_lm, b_lm)
if not (monom is None or a_lc % b_lc):
return monom, K.quo(a_lc, b_lc)
else:
return None
def _term_ff_div(a, b, K):
"""Division of two terms in over a field. """
a_lm, a_lc = a
b_lm, b_lc = b
monom = monomial_div(a_lm, b_lm)
if monom is not None:
return monom, K.quo(a_lc, b_lc)
else:
return None
def sdp_div(f, G, u, O, K):
"""
Generalized polynomial division with remainder in `K[X]`.
Given polynomial `f` and a set of polynomials `g = (g_1, ..., g_n)`
compute a set of quotients `q = (q_1, ..., q_n)` and remainder `r`
such that `f = q_1*f_1 + ... + q_n*f_n + r`, where `r = 0` or `r`
is a completely reduced polynomial with respect to `g`.
**References**
1. [Cox97]_
2. [Ajwa95]_
"""
Q, r = [ [] for _ in xrange(len(G)) ], []
if K.has_Field:
term_div = _term_ff_div
else:
term_div = _term_rr_div
while f:
for i, g in enumerate(G):
tq = term_div(sdp_LT(f, u, K), sdp_LT(g, u, K), K)
if tq is not None:
Q[i] = sdp_add_term(Q[i], tq, u, O, K)
f = sdp_sub(f, sdp_mul_term(g, tq, u, O, K), u, O, K)
break
else:
r = sdp_add_term(r, sdp_LT(f, u, K), u, O, K)
f = sdp_del_LT(f)
return Q, r
def sdp_rem(f, g, u, O, K):
"""Returns polynomial remainder in `K[X]`. """
return sdp_div(f, g, u, O, K)[1]
def sdp_quo(f, g, u, O, K):
"""Returns polynomial quotient in `K[x]`. """
return sdp_div(f, g, u, O, K)[0]
def sdp_exquo(f, g, u, O, K):
"""Returns exact polynomial quotient in `K[X]`. """
q, r = sdp_div(f, g, u, O, K)
if not r:
return q
else:
raise ExactQuotientFailed(f, g)
def sdp_lcm(f, g, u, O, K):
"""
Computes LCM of two polynomials in `K[X]`.
The LCM is computed as the unique generater of the intersection
of the two ideals generated by `f` and `g`. The approach is to
compute a Groebner basis with respect to lexicographic ordering
of `t*f` and `(1 - t)*g`, where `t` is an unrelated variable and
then filtering out the solution that doesn't contain `t`.
**References**
1. [Cox97]_
"""
if not f or not g:
return []
if sdp_term_p(f) and sdp_term_p(g):
monom = monomial_lcm(sdp_LM(f, u), sdp_LM(g, u))
fc, gc = sdp_LC(f, K), sdp_LC(g, K)
if K.has_Field:
coeff = K.one
else:
coeff = K.lcm(fc, gc)
return [(monom, coeff)]
if not K.has_Field:
lcm = K.one
else:
fc, f = sdp_primitive(f, K)
gc, g = sdp_primitive(g, K)
lcm = K.lcm(fc, gc)
f_terms = tuple( ((1,) + m, c) for m, c in f )
g_terms = tuple( ((0,) + m, c) for m, c in g ) \
+ tuple( ((1,) + m, -c) for m, c in g )
F = sdp_sort(f_terms, O_lex)
G = sdp_sort(g_terms, O_lex)
basis = sdp_groebner([F, G], u, O_lex, K)
H = [ h for h in basis if sdp_indep_p(h, 0, u) ]
if K.is_one(lcm):
h = [ (m[1:], c) for m, c in H[0] ]
else:
h = [ (m[1:], c*lcm) for m, c in H[0] ]
return sdp_sort(h, O)
def sdp_gcd(f, g, u, O, K):
"""Compute GCD of two polynomials in `K[X]` via LCM. """
if not K.has_Field:
fc, f = sdp_primitive(f, K)
gc, g = sdp_primitive(g, K)
gcd = K.gcd(fc, gc)
h = sdp_quo(sdp_mul(f, g, u, O, K),
sdp_lcm(f, g, u, O, K), u, O, K)
if not K.has_Field:
if K.is_one(gcd):
return h
else:
return [ (m, c*gcd) for m, c in h ]
else:
return sdp_monic(h, K)
def sdp_groebner(f, u, O, K, gens='', verbose=False):
"""
Computes Groebner basis for a set of polynomials in `K[X]`.
Given a set of multivariate polynomials `F`, finds another
set `G`, such that Ideal `F = Ideal G` and `G` is a reduced
Groebner basis.
The resulting basis is unique and has monic generators if the
ground domains is a field. Otherwise the result is non-unique
but Groebner bases over e.g. integers can be computed (if the
input polynomials are monic).
Groebner bases can be used to choose specific generators for a
polynomial ideal. Because these bases are unique you can check
for ideal equality by comparing the Groebner bases. To see if
one polynomial lies in an ideal, divide by the elements in the
base and see if the remainder vanishes.
They can also be used to solve systems of polynomial equations
as, by choosing lexicographic ordering, you can eliminate one
variable at a time, provided that the ideal is zero-dimensional
(finite number of solutions).
**References**
1. [Bose03]_
2. [Giovini91]_
3. [Ajwa95]_
4. [Cox97]_
Algorithm used: an improved version of Buchberger's algorithm
as presented in T. Becker, V. Weispfenning, Groebner Bases: A
Computational Approach to Commutative Algebra, Springer, 1993,
page 232.
Added optional ``gens`` argument to apply :func:`sdp_str` for
the purpose of debugging the algorithm.
"""
if not K.has_Field:
raise DomainError("can't compute a Groebner basis over %s" % K)
def select(P):
# normal selection strategy
# select the pair with minimum LCM(LM(f), LM(g))
pr = min(P, key=lambda pair: O(monomial_lcm(sdp_LM(f[pair[0]], u), sdp_LM(f[pair[1]], u))))
return pr
def normal(g, J):
h = sdp_rem(g, [ f[j] for j in J ], u, O, K)
if not h:
return None
else:
h = sdp_monic(h, K)
h = tuple(h)
if not h in I:
I[h] = len(f)
f.append(h)
return sdp_LM(h, u), I[h]
def update(G, B, ih):
# update G using the set of critical pairs B and h
# [BW] page 230
h = f[ih]
mh = sdp_LM(h, u)
# filter new pairs (h, g), g in G
C = G.copy()
D = set()
while C:
# select a pair (h, g) by popping an element from C
ig = C.pop()
g = f[ig]
mg = sdp_LM(g, u)
LCMhg = monomial_lcm(mh, mg)
def lcm_divides(ip):
# LCM(LM(h), LM(p)) divides LCM(LM(h), LM(g))
m = monomial_lcm(mh, sdp_LM(f[ip], u))
return monomial_div(LCMhg, m)
# HT(h) and HT(g) disjoint: mh*mg == LCMhg
if monomial_mul(mh, mg) == LCMhg or (
not any(lcm_divides(ipx) for ipx in C) and
not any(lcm_divides(pr[1]) for pr in D)):
D.add((ih, ig))
E = set()
while D:
# select h, g from D (h the same as above)
ih, ig = D.pop()
mg = sdp_LM(f[ig], u)
LCMhg = monomial_lcm(mh, mg)
if not monomial_mul(mh, mg) == LCMhg:
E.add((ih, ig))
# filter old pairs
B_new = set()
while B:
# select g1, g2 from B (-> CP)
ig1, ig2 = B.pop()
mg1 = sdp_LM(f[ig1], u)
mg2 = sdp_LM(f[ig2], u)
LCM12 = monomial_lcm(mg1, mg2)
# if HT(h) does not divide lcm(HT(g1), HT(g2))
if not monomial_div(LCM12, mh) or \
monomial_lcm(mg1, mh) == LCM12 or \
monomial_lcm(mg2, mh) == LCM12:
B_new.add((ig1, ig2))
B_new |= E
# filter polynomials
G_new = set()
while G:
ig = G.pop()
mg = sdp_LM(f[ig], u)
if not monomial_div(mg, mh):
G_new.add(ig)
G_new.add(ih)
return G_new, B_new
# end of update ################################
if not f:
return []
# replace f with a reduced list of initial polynomials; see [BW] page 203
f1 = f[:]
while True:
f = f1[:]
f1 = []
for i in range(len(f)):
p = f[i]
r = sdp_rem(p, f[:i], u, O, K)
if r:
f1.append(sdp_monic(r, K))
if f == f1:
break
f = [tuple(p) for p in f]
I = {} # ip = I[p]; p = f[ip]
F = set() # set of indices of polynomials
G = set() # set of indices of intermediate would-be Groebner basis
CP = set() # set of pairs of indices of critical pairs
for i, h in enumerate(f):
I[h] = i
F.add(i)
#####################################
# algorithm GROEBNERNEWS2 in [BW] page 232
while F:
# select p with minimum monomial according to the monomial ordering O
h = min([f[x] for x in F], key=lambda f: O(sdp_LM(f, u)))
ih = I[h]
F.remove(ih)
G, CP = update(G, CP, ih)
# count the number of critical pairs which reduce to zero
reductions_to_zero = 0
while CP:
ig1, ig2 = select(CP)
CP.remove((ig1, ig2))
h = sdp_spoly(f[ig1], f[ig2], u, O, K)
# ordering divisors is on average more efficient [Cox] page 111
G1 = sorted(G, key=lambda g: O(sdp_LM(f[g], u)))
ht = normal(h, G1)
if ht:
G, CP = update(G, CP, ht[1])
else:
reductions_to_zero += 1
######################################
# now G is a Groebner basis; reduce it
Gr = set()
for ig in G:
ht = normal(f[ig], G - set([ig]))
if ht:
Gr.add(ht[1])
Gr = [list(f[ig]) for ig in Gr]
# order according to the monomial ordering
Gr = sorted(Gr, key=lambda f: O(sdp_LM(f, u)), reverse=True)
if verbose:
print 'reductions_to_zero = %d' % reductions_to_zero
return Gr
def sdp_str(f, gens):
if isinstance(gens, basestring):
gens = gens.split(',')
ngens = len(gens)
z = (0,)*ngens
s = ''
for expv, c in f:
if c > 0:
s += ' +'
else:
s += ' -'
if c < 0:
c = -c
if c != 1: # and expv != z:
cnt1 = str(c)
else:
cnt1 = ''
sa = []
for i in range(ngens):
exp = expv[i]
if exp > 1:
sa.append('%s^%d' % (gens[i], exp))
if exp == 1:
sa.append('%s' % gens[i])
if cnt1:
sa = [cnt1] + sa
s += '*'.join(sa)
return s
def sdp_spoly(p1, p2, u, O, K):
"""
Compute LCM(LM(p1), LM(p2))/LM(p1)*p1 - LCM(LM(p1), LM(p2))/LM(p2)*p2
This is the S-poly provided p1 and p2 are monic
"""
LM1 = sdp_LM(p1, u)
LM2 = sdp_LM(p2, u)
LCM12 = monomial_lcm(LM1, LM2)
m1 = monomial_div(LCM12, LM1)
m2 = monomial_div(LCM12, LM2)
s1 = sdp_mul_term(p1, (m1, K.one), u, O, K)
s2 = sdp_mul_term(p2, (m2, K.one), u, O, K)
s = sdp_sub(s1, s2, u, O, K)
return s
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