/usr/share/massxpert/pol-seqs/centrin-2-human.mxp is in massxpert-data 3.2.0-2.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 | <?xml version="1.0"?>
<!-- DTD for polymer sequences, used by the
'massXpert' mass spectrometry application.
Copyright 2006,2007 Filippo Rusconi - Licensed under the GNU GPL -->
<!DOCTYPE polseqdata [
<!ELEMENT polseqdata (polchemdef_name,name,code,author,datetime,polseq,le_modif?,re_modif?,prop*)>
<!ATTLIST polseqdata version NMTOKEN #REQUIRED>
<!ELEMENT polchemdef_name (#PCDATA)>
<!ELEMENT name (#PCDATA)>
<!ELEMENT code (#PCDATA)>
<!ELEMENT author (#PCDATA)>
<!ELEMENT datetime (#PCDATA)>
<!ELEMENT polseq (codes|monomer)*>
<!ELEMENT le_modif (#PCDATA)>
<!ELEMENT re_modif (#PCDATA)>
<!ELEMENT codes (#PCDATA)>
<!ELEMENT monomer (code, prop*)>
<!ELEMENT prop (name, data+)>
<!ATTLIST data type (str | int | dbl) "str">
<!ELEMENT data (#PCDATA)>
]>
<polseqdata version="2">
<polchemdef_name>protein-1-letter</polchemdef_name>
<name>Centrin 2 HUMAN</name>
<code>NOT_SET</code>
<author>rusconi</author>
<datetime>2008-02-15:04:55</datetime>
<polseq>
<codes>MASNFKKANMASSSQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVA</codes>
<monomer>
<code>M</code>
<prop>
<name>MODIF</name>
<data>Oxidation</data>
<data>+O2</data>
<data>;M;</data>
</prop>
</monomer>
<codes>RALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTSLY</codes>
</polseq>
</polseqdata>
|