/usr/share/app-install/desktop/gcrystal:gcrystal-0.12.desktop is in app-install-data 0.12.04.4.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
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X-AppInstall-Package=gcrystal
X-AppInstall-Popcon=62
X-AppInstall-Section=universe
Version=1.0
Name=Gnome Crystal Crystalline Structures Viewer
Comment=Edit and display crystalline structures
Exec=gcrystal-0.12 %U
Icon=gcrystal
Terminal=false
Type=Application
DocPath=gcrystal/gcrystal.xml
Categories=GTK;GNOME;Education;Science;Chemistry;
MimeType=application/x-gcrystal;chemical/x-cif;chemical/x-cml;
X-Ubuntu-Gettext-Domain=app-install-data
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