/usr/share/app-install/desktop/clustalx:clustalx.desktop is in app-install-data 0.12.04.4.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
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X-AppInstall-Package=clustalx
X-AppInstall-Popcon=144
X-AppInstall-Section=multiverse
Version=1.0
Terminal=false
Icon=clustalx
Exec=clustalx
Name=Clustal X
GenericName=Alignment and phylogeny
Comment=Global multiple nucleotide or peptide sequence alignment and phylogenetic analysis
Type=Application
Categories=Biology;Science;Education;
MimeType=text/x-clustalw-alignment;
X-Ubuntu-Gettext-Domain=app-install-data
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