This file is indexed.

/usr/lib/R/site-library/glmnet/INDEX is in r-cran-glmnet 2.0-16-1.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

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beta_CVX                Simulated data for the glmnet vignette
cv.glmnet               Cross-validation for glmnet
deviance.glmnet         Extract the deviance from a glmnet object
glmnet                  fit a GLM with lasso or elasticnet
                        regularization
glmnet-package          Elastic net model paths for some generalized
                        linear models
glmnet.control          internal glmnet parameters
plot.cv.glmnet          plot the cross-validation curve produced by
                        cv.glmnet
plot.glmnet             plot coefficients from a "glmnet" object
predict.cv.glmnet       make predictions from a "cv.glmnet" object.
predict.glmnet          make predictions from a "glmnet" object.
print.glmnet            print a glmnet object