About

This package is 1.6 MB. It is available at http://archive.ubuntu.com/ubuntu/pool/universe/p/python-pysam/python3-pysam_0.14+ds-2_amd64.deb .

View its full control file here: debian/control.

Description

interface for the SAM/BAM sequence alignment and mapping format (Python 3)

Relations

This package depends on: libc6 (>= 2.14), libhts2 (>= 1.7), zlib1g (>= 1:1.1.4), python3 (<< 3.7), python3 (>= 3.6~), python3:any (>= 3.3.2-2~).

This package does not recommend any other package.

This package does not suggest any other package.

This package does not conflict with any other package.

Package Contents

This package is indexed.

python3-pysam 0.14+ds-2 is in ubuntu - bionic / universe. This package's architecture is: amd64.

File Mime Type Owner Mode Size
postinst text/x-shellscript N/A N/A 172 bytes
prerm text/x-shellscript N/A N/A 401 bytes
/usr/ root:root 0o755
/usr/lib/ root:root 0o755
/usr/lib/python3/ root:root 0o755
/usr/lib/python3/dist-packages/ root:root 0o755
/usr/lib/python3/dist-packages/log.txt application/x-empty root:root 0o644 0 bytes
/usr/lib/python3/dist-packages/pysam/ root:root 0o755
/usr/lib/python3/dist-packages/pysam-0.14.egg-info/ root:root 0o755
/usr/lib/python3/dist-packages/pysam-0.14.egg-info/dependency_links.txt application/octet-stream root:root 0o644 1 byte
/usr/lib/python3/dist-packages/pysam-0.14.egg-info/not-zip-safe application/octet-stream root:root 0o644 1 byte
/usr/lib/python3/dist-packages/pysam-0.14.egg-info/PKG-INFO text/plain root:root 0o644 1.6 KB
/usr/lib/python3/dist-packages/pysam-0.14.egg-info/top_level.txt text/plain root:root 0o644 6 bytes
/usr/lib/python3/dist-packages/pysam/bcftools.py text/x-python root:root 0o644 429 bytes
/usr/lib/python3/dist-packages/pysam/cbcftools_util.h text/x-c root:root 0o644 102 bytes
/usr/lib/python3/dist-packages/pysam/config.py text/plain root:root 0o644 16 bytes
/usr/lib/python3/dist-packages/pysam/csamtools_util.h text/x-c root:root 0o644 102 bytes
/usr/lib/python3/dist-packages/pysam/htslib_util.h text/x-c root:root 0o644 3.0 KB
/usr/lib/python3/dist-packages/pysam/include/ root:root 0o755
/usr/lib/python3/dist-packages/pysam/include/bcftools/ root:root 0o755
/usr/lib/python3/dist-packages/pysam/include/bcftools/bam2bcf.h text/x-c root:root 0o644 5.0 KB
/usr/lib/python3/dist-packages/pysam/include/bcftools/bam_sample.h text/x-c root:root 0o644 2.0 KB
/usr/lib/python3/dist-packages/pysam/include/bcftools/bcftools.h text/x-c root:root 0o644 2.5 KB
/usr/lib/python3/dist-packages/pysam/include/bcftools/bcftools.pysam.h text/x-c root:root 0o644 1004 bytes
/usr/lib/python3/dist-packages/pysam/include/bcftools/bin.h text/x-c root:root 0o644 2.1 KB
/usr/lib/python3/dist-packages/pysam/include/bcftools/call.h text/x-c root:root 0o644 4.6 KB
/usr/lib/python3/dist-packages/pysam/include/bcftools/config.h text/plain root:root 0o644 77 bytes
/usr/lib/python3/dist-packages/pysam/include/bcftools/convert.h text/x-c root:root 0o644 1.7 KB
/usr/lib/python3/dist-packages/pysam/include/bcftools/filter.h text/x-c root:root 0o644 1.9 KB
/usr/lib/python3/dist-packages/pysam/include/bcftools/gvcf.h text/x-c root:root 0o644 1.5 KB
/usr/lib/python3/dist-packages/pysam/include/bcftools/hclust.h text/x-c root:root 0o644 2.7 KB
/usr/lib/python3/dist-packages/pysam/include/bcftools/HMM.h text/x-c root:root 0o644 4.9 KB
/usr/lib/python3/dist-packages/pysam/include/bcftools/khash_str2str.h text/x-c root:root 0o644 3.1 KB
/usr/lib/python3/dist-packages/pysam/include/bcftools/kheap.h text/x-c root:root 0o644 7.5 KB
/usr/lib/python3/dist-packages/pysam/include/bcftools/kmin.h text/x-c root:root 0o644 1.6 KB
/usr/lib/python3/dist-packages/pysam/include/bcftools/mw.h text/x-c root:root 0o644 60.8 KB
/usr/lib/python3/dist-packages/pysam/include/bcftools/ploidy.h text/x-c root:root 0o644 4.3 KB
/usr/lib/python3/dist-packages/pysam/include/bcftools/prob1.h text/x-c root:root 0o644 3.5 KB
/usr/lib/python3/dist-packages/pysam/include/bcftools/rbuf.h text/x-c root:root 0o644 7.4 KB
/usr/lib/python3/dist-packages/pysam/include/bcftools/regidx.h text/x-c root:root 0o644 7.0 KB
/usr/lib/python3/dist-packages/pysam/include/bcftools/smpl_ilist.h text/x-c root:root 0o644 1.7 KB
/usr/lib/python3/dist-packages/pysam/include/bcftools/tsv2vcf.h text/x-c root:root 0o644 2.6 KB
/usr/lib/python3/dist-packages/pysam/include/bcftools/vcfbuf.h text/x-c root:root 0o644 2.7 KB
/usr/lib/python3/dist-packages/pysam/include/bcftools/vcmp.h text/plain root:root 0o644 2.3 KB
/usr/lib/python3/dist-packages/pysam/include/bcftools/version.h text/plain root:root 0o644 31 bytes
/usr/lib/python3/dist-packages/pysam/include/__init__.py application/x-empty root:root 0o644 0 bytes
/usr/lib/python3/dist-packages/pysam/include/samtools/ root:root 0o755
/usr/lib/python3/dist-packages/pysam/include/samtools/bam2bcf.h text/x-c root:root 0o644 5.0 KB
/usr/lib/python3/dist-packages/pysam/include/samtools/bam_endian.h text/x-c root:root 0o644 2.2 KB
/usr/lib/python3/dist-packages/pysam/include/samtools/bam.h text/x-c root:root 0o644 20.5 KB
/usr/lib/python3/dist-packages/pysam/include/samtools/bam_lpileup.h text/x-c root:root 0o644 2.0 KB
/usr/lib/python3/dist-packages/pysam/include/samtools/bam_plbuf.h text/x-c root:root 0o644 1.8 KB
/usr/lib/python3/dist-packages/pysam/include/samtools/bedidx.h text/x-c root:root 0o644 563 bytes
/usr/lib/python3/dist-packages/pysam/include/samtools/config.h text/plain root:root 0o644 77 bytes
/usr/lib/python3/dist-packages/pysam/include/samtools/sam.h text/x-c root:root 0o644 5.2 KB
/usr/lib/python3/dist-packages/pysam/include/samtools/sam_header.h text/x-c root:root 0o644 2.7 KB
/usr/lib/python3/dist-packages/pysam/include/samtools/sam_opts.h text/x-c root:root 0o644 3.9 KB
/usr/lib/python3/dist-packages/pysam/include/samtools/sample.h text/x-c root:root 0o644 1.5 KB
/usr/lib/python3/dist-packages/pysam/include/samtools/samtools.h text/plain root:root 0o644 1.6 KB
/usr/lib/python3/dist-packages/pysam/include/samtools/samtools.pysam.h text/x-c root:root 0o644 986 bytes
/usr/lib/python3/dist-packages/pysam/include/samtools/stats_isize.h text/x-c root:root 0o644 2.4 KB
/usr/lib/python3/dist-packages/pysam/include/samtools/tmp_file.h text/x-c root:root 0o644 4.4 KB
/usr/lib/python3/dist-packages/pysam/include/samtools/version.h text/plain root:root 0o644 31 bytes
/usr/lib/python3/dist-packages/pysam/include/samtools/win32/ root:root 0o755
/usr/lib/python3/dist-packages/pysam/include/samtools/win32/xcurses.h text/x-c root:root 0o644 48.7 KB
/usr/lib/python3/dist-packages/pysam/include/samtools/win32/zconf.h text/plain root:root 0o644 9.3 KB
/usr/lib/python3/dist-packages/pysam/include/samtools/win32/zlib.h text/x-c root:root 0o644 64.6 KB
/usr/lib/python3/dist-packages/pysam/__init__.py text/x-python root:root 0o644 3.2 KB
/usr/lib/python3/dist-packages/pysam/libcalignedsegment.cpython-36m-x86_64-linux-gnu.so application/x-sharedlib root:root 0o644 652.0 KB
/usr/lib/python3/dist-packages/pysam/libcalignedsegment.pxd text/plain root:root 0o644 2.9 KB
/usr/lib/python3/dist-packages/pysam/libcalignmentfile.cpython-36m-x86_64-linux-gnu.so application/x-sharedlib root:root 0o644 509.7 KB
/usr/lib/python3/dist-packages/pysam/libcalignmentfile.pxd text/plain root:root 0o644 3.6 KB
/usr/lib/python3/dist-packages/pysam/libcbcf.cpython-36m-x86_64-linux-gnu.so application/x-sharedlib root:root 0o644 898.7 KB
/usr/lib/python3/dist-packages/pysam/libcbcf.pxd text/plain root:root 0o644 3.9 KB
/usr/lib/python3/dist-packages/pysam/libcbcftools.cpython-36m-x86_64-linux-gnu.so application/x-sharedlib root:root 0o644 838.1 KB
/usr/lib/python3/dist-packages/pysam/libcbcftools.pxd text/x-c root:root 0o644 304 bytes
/usr/lib/python3/dist-packages/pysam/libcbgzf.cpython-36m-x86_64-linux-gnu.so application/x-sharedlib root:root 0o644 74.7 KB
/usr/lib/python3/dist-packages/pysam/libcfaidx.cpython-36m-x86_64-linux-gnu.so application/x-sharedlib root:root 0o644 166.0 KB
/usr/lib/python3/dist-packages/pysam/libcfaidx.pxd text/plain root:root 0o644 2.1 KB
/usr/lib/python3/dist-packages/pysam/libchtslib.cpython-36m-x86_64-linux-gnu.so application/x-sharedlib root:root 0o644 185.2 KB
/usr/lib/python3/dist-packages/pysam/libchtslib.pxd text/plain root:root 0o644 102.1 KB
/usr/lib/python3/dist-packages/pysam/libcsamfile.cpython-36m-x86_64-linux-gnu.so application/x-sharedlib root:root 0o644 36.4 KB
/usr/lib/python3/dist-packages/pysam/libcsamfile.pxd text/plain root:root 0o644 1.5 KB
/usr/lib/python3/dist-packages/pysam/libcsamtools.cpython-36m-x86_64-linux-gnu.so application/x-sharedlib root:root 0o644 511.0 KB
/usr/lib/python3/dist-packages/pysam/libcsamtools.pxd text/x-c root:root 0o644 304 bytes
/usr/lib/python3/dist-packages/pysam/libctabix.cpython-36m-x86_64-linux-gnu.so application/x-sharedlib root:root 0o644 298.8 KB
/usr/lib/python3/dist-packages/pysam/libctabixproxies.cpython-36m-x86_64-linux-gnu.so application/x-sharedlib root:root 0o644 242.1 KB
/usr/lib/python3/dist-packages/pysam/libctabixproxies.pxd text/plain root:root 0o644 1.3 KB
/usr/lib/python3/dist-packages/pysam/libctabix.pxd text/plain root:root 0o644 2.6 KB
/usr/lib/python3/dist-packages/pysam/libcutils.cpython-36m-x86_64-linux-gnu.so application/x-sharedlib root:root 0o644 125.7 KB
/usr/lib/python3/dist-packages/pysam/libcutils.pxd text/plain root:root 0o644 1.3 KB
/usr/lib/python3/dist-packages/pysam/libcvcf.cpython-36m-x86_64-linux-gnu.so application/x-sharedlib root:root 0o644 691.3 KB
/usr/lib/python3/dist-packages/pysam/libcvcf.pxd text/plain root:root 0o644 2 bytes
/usr/lib/python3/dist-packages/pysam/Pileup.py text/x-python root:root 0o644 8.8 KB
/usr/lib/python3/dist-packages/pysam/pysam_stream.h text/x-c root:root 0o644 255 bytes
/usr/lib/python3/dist-packages/pysam/pysam_util.h text/plain root:root 0o644 51 bytes
/usr/lib/python3/dist-packages/pysam/samtools.py text/x-python root:root 0o644 1.4 KB
/usr/lib/python3/dist-packages/pysam/utils.py text/x-c++ root:root 0o644 3.1 KB
/usr/lib/python3/dist-packages/pysam/version.py text/plain root:root 0o644 195 bytes
/usr/share/ root:root 0o755
/usr/share/doc/ root:root 0o755
/usr/share/doc/python3-pysam/ root:root 0o755
/usr/share/doc/python3-pysam/changelog.Debian.gz application/gzip root:root 0o644 1.6 KB
/usr/share/doc/python3-pysam/copyright text/plain root:root 0o644 6.2 KB
/usr/share/lintian/ root:root 0o755
/usr/share/lintian/overrides/ root:root 0o755
/usr/share/lintian/overrides/python3-pysam text/plain root:root 0o644 209 bytes