/usr/lib/python3/dist-packages/fiona/collection.py is in python3-fiona 1.7.10-1build1.
This file is owned by root:root, with mode 0o644.
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# Collections provide file-like access to feature data
import logging
import os
import warnings
from fiona import compat
from fiona.ogrext import Iterator, ItemsIterator, KeysIterator
from fiona.ogrext import Session, WritingSession
from fiona.ogrext import (
calc_gdal_version_num, get_gdal_version_num, get_gdal_release_name)
from fiona.ogrext import buffer_to_virtual_file, remove_virtual_file
from fiona.errors import DriverError, SchemaError, CRSError
from fiona._drivers import driver_count, GDALEnv
from fiona.drvsupport import supported_drivers
from six import string_types, binary_type
log = logging.getLogger(__name__)
class Collection(object):
"""A file-like interface to features of a vector dataset
Python text file objects are iterators over lines of a file. Fiona
Collections are similar iterators (not lists!) over features
represented as GeoJSON-like mappings.
"""
def __init__(self, path, mode='r', driver=None, schema=None, crs=None,
encoding=None, layer=None, vsi=None, archive=None,
enabled_drivers=None, crs_wkt=None, **kwargs):
"""The required ``path`` is the absolute or relative path to
a file, such as '/data/test_uk.shp'. In ``mode`` 'r', data can
be read only. In ``mode`` 'a', data can be appended to a file.
In ``mode`` 'w', data overwrites the existing contents of
a file.
In ``mode`` 'w', an OGR ``driver`` name and a ``schema`` are
required. A Proj4 ``crs`` string is recommended. If both ``crs``
and ``crs_wkt`` keyword arguments are passed, the latter will
trump the former.
In 'w' mode, kwargs will be mapped to OGR layer creation
options.
"""
if not isinstance(path, string_types):
raise TypeError("invalid path: %r" % path)
if not isinstance(mode, string_types) or mode not in ('r', 'w', 'a'):
raise TypeError("invalid mode: %r" % mode)
if driver and not isinstance(driver, string_types):
raise TypeError("invalid driver: %r" % driver)
if schema and not hasattr(schema, 'get'):
raise TypeError("invalid schema: %r" % schema)
if crs and not isinstance(crs, compat.DICT_TYPES + string_types):
raise TypeError("invalid crs: %r" % crs)
if crs_wkt and not isinstance(crs_wkt, string_types):
raise TypeError("invalid crs_wkt: %r" % crs_wkt)
if encoding and not isinstance(encoding, string_types):
raise TypeError("invalid encoding: %r" % encoding)
if layer and not isinstance(layer, tuple(list(string_types) + [int])):
raise TypeError("invalid name: %r" % layer)
if vsi:
if not isinstance(vsi, string_types) or vsi not in ('zip', 'tar', 'gzip'):
raise TypeError("invalid vsi: %r" % vsi)
if archive and not isinstance(archive, string_types):
raise TypeError("invalid archive: %r" % archive)
# Check GDAL version against drivers
if (driver == "GPKG" and
get_gdal_version_num() < calc_gdal_version_num(1, 11, 0)):
raise DriverError(
"GPKG driver requires GDAL 1.11.0, fiona was compiled "
"against: {}".format(get_gdal_release_name()))
self.session = None
self.iterator = None
self._len = 0
self._bounds = None
self._driver = None
self._schema = None
self._crs = None
self._crs_wkt = None
self.env = None
self.enabled_drivers = enabled_drivers
self.path = vsi_path(path, vsi, archive)
if mode == 'w':
if layer and not isinstance(layer, string_types):
raise ValueError("in 'r' mode, layer names must be strings")
if driver == 'GeoJSON':
if layer is not None:
raise ValueError("the GeoJSON format does not have layers")
self.name = 'OgrGeoJSON'
# TODO: raise ValueError as above for other single-layer formats.
else:
self.name = layer or os.path.basename(os.path.splitext(path)[0])
else:
if layer in (0, None):
self.name = 0
else:
self.name = layer or os.path.basename(os.path.splitext(path)[0])
self.mode = mode
if self.mode == 'w':
if driver == 'Shapefile':
driver = 'ESRI Shapefile'
if not driver:
raise DriverError("no driver")
elif driver not in supported_drivers:
raise DriverError(
"unsupported driver: %r" % driver)
elif self.mode not in supported_drivers[driver]:
raise DriverError(
"unsupported mode: %r" % self.mode)
self._driver = driver
if not schema:
raise SchemaError("no schema")
elif 'properties' not in schema:
raise SchemaError("schema lacks: properties")
elif 'geometry' not in schema:
raise SchemaError("schema lacks: geometry")
self._schema = schema
if crs_wkt:
self._crs_wkt = crs_wkt
elif crs:
if 'init' in crs or 'proj' in crs or 'epsg' in crs.lower():
self._crs = crs
else:
raise CRSError("crs lacks init or proj parameter")
if driver_count == 0:
# create a local manager and enter
self.env = GDALEnv()
else:
self.env = GDALEnv()
self.env.__enter__()
self._driver = driver
self.encoding = encoding
try:
if self.mode == 'r':
self.session = Session()
self.session.start(self)
elif self.mode in ('a', 'w'):
self.session = WritingSession()
self.session.start(self, **kwargs)
except IOError:
self.session = None
raise
if self.session is not None:
self.guard_driver_mode()
if not self.encoding:
self.encoding = self.session.get_fileencoding().lower()
def __repr__(self):
return "<%s Collection '%s', mode '%s' at %s>" % (
self.closed and "closed" or "open",
self.path + ":" + str(self.name),
self.mode,
hex(id(self)))
def guard_driver_mode(self):
driver = self.session.get_driver()
if driver not in supported_drivers:
raise DriverError("unsupported driver: %r" % driver)
if self.mode not in supported_drivers[driver]:
raise DriverError("unsupported mode: %r" % self.mode)
@property
def driver(self):
"""Returns the name of the proper OGR driver."""
if not self._driver and self.mode in ("a", "r") and self.session:
self._driver = self.session.get_driver()
return self._driver
@property
def schema(self):
"""Returns a mapping describing the data schema.
The mapping has 'geometry' and 'properties' items. The former is a
string such as 'Point' and the latter is an ordered mapping that
follows the order of fields in the data file.
"""
if not self._schema and self.mode in ("a", "r") and self.session:
self._schema = self.session.get_schema()
return self._schema
@property
def crs(self):
"""Returns a Proj4 string."""
if self._crs is None and self.session:
self._crs = self.session.get_crs()
return self._crs
@property
def crs_wkt(self):
"""Returns a WKT string."""
if self._crs_wkt is None and self.session:
self._crs_wkt = self.session.get_crs_wkt()
return self._crs_wkt
@property
def meta(self):
"""Returns a mapping with the driver, schema, crs, and additional
properties."""
return {
'driver': self.driver, 'schema': self.schema, 'crs': self.crs,
'crs_wkt': self.crs_wkt}
profile = meta
def filter(self, *args, **kwds):
"""Returns an iterator over records, but filtered by a test for
spatial intersection with the provided ``bbox``, a (minx, miny,
maxx, maxy) tuple or a geometry ``mask``.
Positional arguments ``stop`` or ``start, stop[, step]`` allows
iteration to skip over items or stop at a specific item.
"""
if self.closed:
raise ValueError("I/O operation on closed collection")
elif self.mode != 'r':
raise IOError("collection not open for reading")
if args:
s = slice(*args)
start = s.start
stop = s.stop
step = s.step
else:
start = stop = step = None
bbox = kwds.get('bbox')
mask = kwds.get('mask')
if bbox and mask:
raise ValueError("mask and bbox can not be set together")
self.iterator = Iterator(
self, start, stop, step, bbox, mask)
return self.iterator
def items(self, *args, **kwds):
"""Returns an iterator over FID, record pairs, optionally
filtered by a test for spatial intersection with the provided
``bbox``, a (minx, miny, maxx, maxy) tuple or a geometry
``mask``.
Positional arguments ``stop`` or ``start, stop[, step]`` allows
iteration to skip over items or stop at a specific item.
"""
if self.closed:
raise ValueError("I/O operation on closed collection")
elif self.mode != 'r':
raise IOError("collection not open for reading")
if args:
s = slice(*args)
start = s.start
stop = s.stop
step = s.step
else:
start = stop = step = None
bbox = kwds.get('bbox')
mask = kwds.get('mask')
if bbox and mask:
raise ValueError("mask and bbox can not be set together")
self.iterator = ItemsIterator(
self, start, stop, step, bbox, mask)
return self.iterator
def keys(self, *args, **kwds):
"""Returns an iterator over FIDs, optionally
filtered by a test for spatial intersection with the provided
``bbox``, a (minx, miny, maxx, maxy) tuple or a geometry
``mask``.
Positional arguments ``stop`` or ``start, stop[, step]`` allows
iteration to skip over items or stop at a specific item.
"""
if self.closed:
raise ValueError("I/O operation on closed collection")
elif self.mode != 'r':
raise IOError("collection not open for reading")
if args:
s = slice(*args)
start = s.start
stop = s.stop
step = s.step
else:
start = stop = step = None
bbox = kwds.get('bbox')
mask = kwds.get('mask')
if bbox and mask:
raise ValueError("mask and bbox can not be set together")
self.iterator = KeysIterator(
self, start, stop, step, bbox, mask)
return self.iterator
def __contains__(self, fid):
return self.session.has_feature(fid)
values = filter
def __iter__(self):
"""Returns an iterator over records."""
return self.filter()
def __next__(self):
"""Returns next record from iterator."""
warnings.warn("Collection.__next__() is buggy and will be removed in "
"Fiona 2.0. Switch to `next(iter(collection))`.",
DeprecationWarning, stacklevel=2)
if not self.iterator:
iter(self)
return next(self.iterator)
next = __next__
def __getitem__(self, item):
return self.session.__getitem__(item)
def writerecords(self, records):
"""Stages multiple records for writing to disk."""
if self.closed:
raise ValueError("I/O operation on closed collection")
if self.mode not in ('a', 'w'):
raise IOError("collection not open for writing")
self.session.writerecs(records, self)
self._len = self.session.get_length()
self._bounds = self.session.get_extent()
def write(self, record):
"""Stages a record for writing to disk."""
self.writerecords([record])
def validate_record(self, record):
"""Compares the record to the collection's schema.
Returns ``True`` if the record matches, else ``False``.
"""
# Currently we only compare keys of properties, not the types of
# values.
return (
set(record['properties'].keys()) ==
set(self.schema['properties'].keys()) and
self.validate_record_geometry(record))
def validate_record_geometry(self, record):
"""Compares the record's geometry to the collection's schema.
Returns ``True`` if the record matches, else ``False``.
"""
# Shapefiles welcome mixes of line/multis and polygon/multis.
# OGR reports these mixed files as type "Polygon" or "LineString"
# but will return either these or their multi counterparts when
# reading features.
if (self.driver == "ESRI Shapefile" and
"Point" not in record['geometry']['type']):
return record['geometry']['type'].lstrip(
"Multi") == self.schema['geometry'].lstrip("3D ").lstrip(
"Multi")
else:
return (
record['geometry']['type'] ==
self.schema['geometry'].lstrip("3D "))
def __len__(self):
if self._len <= 0 and self.session is not None:
self._len = self.session.get_length()
if self._len < 0:
# Raise TypeError when we don't know the length so that Python
# will treat Collection as a generator
raise TypeError("Layer does not support counting")
return self._len
@property
def bounds(self):
"""Returns (minx, miny, maxx, maxy)."""
if self._bounds is None and self.session is not None:
self._bounds = self.session.get_extent()
return self._bounds
def flush(self):
"""Flush the buffer."""
if self.session is not None:
self.session.sync(self)
new_len = self.session.get_length()
self._len = new_len > self._len and new_len or self._len
self._bounds = self.session.get_extent()
def close(self):
"""In append or write mode, flushes data to disk, then ends
access."""
if self.session is not None:
if self.mode in ('a', 'w'):
self.flush()
log.debug("Flushed buffer")
self.session.stop()
log.debug("Stopped session")
self.session = None
self.iterator = None
if self.env:
self.env.__exit__()
@property
def closed(self):
"""``False`` if data can be accessed, otherwise ``True``."""
return self.session is None
def __enter__(self):
return self
def __exit__(self, type, value, traceback):
self.close()
def __del__(self):
# Note: you can't count on this being called. Call close() explicitly
# or use the context manager protocol ("with").
self.close()
def get_filetype(bytesbuf):
"""Detect compression type of bytesbuf.
ZIP only. TODO: add others relevant to GDAL/OGR."""
if bytesbuf[:4].startswith(b'PK\x03\x04'):
return 'zip'
else:
return ''
class BytesCollection(Collection):
"""BytesCollection takes a buffer of bytes and maps that to
a virtual file that can then be opened by fiona.
"""
def __init__(self, bytesbuf, **kwds):
"""Takes buffer of bytes whose contents is something we'd like
to open with Fiona and maps it to a virtual file.
"""
if not isinstance(bytesbuf, binary_type):
raise ValueError("input buffer must be bytes")
# Hold a reference to the buffer, as bad things will happen if
# it is garbage collected while in use.
self.bytesbuf = bytesbuf
# Map the buffer to a file. If the buffer contains a zipfile
# we take extra steps in naming the buffer and in opening
# it. If the requested driver is for GeoJSON, we append an an
# appropriate extension to ensure the driver reads it.
filetype = get_filetype(self.bytesbuf)
ext = ''
if filetype == 'zip':
ext = '.zip'
elif kwds.get('driver') == "GeoJSON":
ext = '.json'
self.virtual_file = buffer_to_virtual_file(self.bytesbuf, ext=ext)
# Instantiate the parent class.
super(BytesCollection, self).__init__(self.virtual_file, vsi=filetype,
encoding='utf-8', **kwds)
def close(self):
"""Removes the virtual file associated with the class."""
super(BytesCollection, self).close()
if self.virtual_file:
remove_virtual_file(self.virtual_file)
self.virtual_file = None
self.bytesbuf = None
def __repr__(self):
return "<%s BytesCollection '%s', mode '%s' at %s>" % (
self.closed and "closed" or "open",
self.path + ":" + str(self.name),
self.mode,
hex(id(self)))
def vsi_path(path, vsi=None, archive=None):
# If a VSF and archive file are specified, we convert the path to
# an OGR VSI path (see cpl_vsi.h).
if vsi:
if archive:
result = '/vsi{0}/{1}{2}'.format(vsi, archive, path)
else:
result = '/vsi{0}/{1}'.format(vsi, path)
else:
result = path
return result
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