/etc/primer3_config/tetraloop.ds is in primer3 2.4.0-1ubuntu2.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 | AAAAAT -650
AAAACT 1610
AAACAT 1610
ACTTGT 4190
AGAAAT 1610
AGAGAT 1610
AGATAT 1610
AGCAAT 1610
AGCGAT 1610
AGCTTT 1610
AGGAAT 1610
AGGGAT 1610
AGGGGT 640
AGTAAT 1610
AGTGAT 1610
AGTTCT 1610
ATTCGT 1610
ATTTGT 1610
ATTTTT 1610
CAAAAG -1290
CAAACG 0
CAACAG 0
CAACCG 0
CCTTGG 2570
CGAAAG 0
CGAGAG 0
CGATAG 0
CGCAAG 0
CGCGAG 0
CGCTTG 0
CGGAAG 0
CGGGAG 0
CGGGGG -970
CGTAAG 0
CGTGAG 0
CGTTCG 0
CTTCGG 0
CTTTGG 0
CTTTTG 0
GAAAAC -3230
GAAACC 0
GAACAC 0
GCTTGC 2570
GGAAAC 0
GGAGAC 0
GGATAC 0
GGCAAC 0
GGCGAC 0
GGCTTC 0
GGGAAC 0
GGGGAC 0
GGGGGC -970
GGTAAC 0
GGTGAC 0
GGTTCC 0
GTTCGC 0
GTTTGC 0
GTTTTC 0
TAAAAA 320
TAAACA 1610
TAACAA 1610
TCTTGA 4190
TGAAAA 1610
TGAGAA 1610
TGATAA 1610
TGCAAA 1610
TGCGAA 1610
TGCTTA 1610
TGGAAA 1610
TGGGAA 1610
TGGGGA 640
TGTAAA 1610
TGTGAA 1610
TGTTCA 1610
TTTCGA 1610
TTTTGA 1610
TTTTTA 1610
|