/usr/share/pegasus/examples/shell-blackdiamond/submit is in pegasus-wms 4.4.0+dfsg-7.
This file is owned by root:root, with mode 0o755.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 | #!/bin/bash
set -e
TOPDIR=`pwd`
# figure out where Pegasus is installed
export PEGASUS_HOME=`which pegasus-plan | sed 's:/bin/pegasus-plan::'`
if [ "x$PEGASUS_HOME" = "x" ]; then
echo "Unable to determine location of your Pegasus install"
echo "Please make sure pegasus-plan is in your path"
exit 1
fi
# geneate the input file
echo "This is sample input file" >f.a
# generate the dax
export PYTHONPATH=`pegasus-config --python`
./blackdiamond.py $PEGASUS_HOME >blackdiamond.dax
# create the site catalog
cat >sites.xml <<EOF
<?xml version="1.0" encoding="UTF-8"?>
<sitecatalog xmlns="http://pegasus.isi.edu/schema/sitecatalog" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://pegasus.isi.edu/schema/sitecatalog http://pegasus.isi.edu/schema/sc-4.0.xsd" version="4.0">
<site handle="local" arch="x86_64" os="LINUX">
<directory type="shared-scratch" path="$TOPDIR/work">
<file-server operation="all" url="file://$TOPDIR/work"/>
</directory>
<directory type="local-storage" path="$TOPDIR/outputs">
<file-server operation="all" url="file://$TOPDIR/outputs"/>
</directory>
</site>
</sitecatalog>
EOF
# plan and submit the workflow
pegasus-plan \
--conf pegasusrc \
--sites local \
--output-site local \
--dir work \
--dax blackdiamond.dax \
--submit
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