/usr/bin/pegasus-status is in pegasus-wms 4.4.0+dfsg-7.
This file is owned by root:root, with mode 0o755.
The actual contents of the file can be viewed below.
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#
# collect information about workflows and display their states.
#
##
# Copyright 2007-2010 University Of Southern California
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing,
# software distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
##
#
# Author: Jens-S. Vöckler voeckler at isi dot edu
# Revision: $Revision$
#
use v5.8.8; # unbroken unicode requires perl >= 5.8.8
use strict;
BEGIN {
# use very early - before loading most modules!
$main::isutf8 = ( exists $ENV{LANG} && $ENV{LANG} =~ m{utf-?8}i );
delete $ENV{LANG};
$ENV{LANG} = 'C';
}
use utf8; # tell Perl "this script contains UTF-8"
use Carp;
use Cwd qw(getcwd abs_path);
use File::Spec;
use File::Basename qw(basename dirname);
use Getopt::Long qw(:config bundling no_ignore_case);
use Data::Dumper;
# Path to load Pegasus Perl modules
BEGIN {
my $pegasus_config = File::Spec->catfile( dirname($0), 'pegasus-config' );
eval `$pegasus_config --perl-dump`;
die("Unable to eval pegasus-config output. $@") if $@;
}
use Pegasus::Common;
use Pegasus::Properties qw(%initial); # parses -Dprop=val from @ARGV
# set function TIOCGWINSZ to return ioctl() argument
if ( $^O eq 'darwin' ) {
# h2ph is broken on Darwin
*TIOCGWINSZ = sub { 0x40087468; };
}
elsif ( $^O eq 'linux' ) {
# not broken, but may not be installed
*TIOCGWINSZ = sub { 0x5413; };
}
elsif ( lc $^O eq 'sunos' ) {
# may be easier than getting the headers right
*TIOCGWINSZ = sub { 0x5468; };
}
else {
# Neither linux nor macosx
eval { require "sys/ioctl.ph" };
}
#
# --- globals ----------------------------------------------
#
$main::debug = 0; # debug output
$main::color = 0; # default: no color (black bg terminal)
$main::user = $ENV{USER} || $ENV{LOGNAME} || scalar getpwuid($>);
$_ = '$Revision$'; # don't edit, automatically updated by CVS
$main::revision = $1 if /Revision:\s+([0-9.]+)/o;
$main::onatty = -t STDOUT; # are we connected to a terminal?
$main::dirsep = File::Spec->catdir( '', '' );
$main::space = ' '; # 2 spaces in basic mode
@main::clong = # Condor job states (basic mode)
(
'Unsub' # U
, 'Idle' # I
, 'Run' # R
, 'Del' # X
, 'Done' # C
, 'Held' # H
);
@main::cstat = qw(U I R X C H); # Condor job states (expert mode)
@main::ccolor = (
"\033[0;37m" # unsubmitted (gray)
, "\033[0;34m" # idle (blue)
, "\033[0;32m" # running (green)
, "\033[0;35m" # removing (magenta)
, "\033[0;36m" # completed (cyan)
, "\033[0;31m" # held (red)
);
$main::bold = "\033[1m"; # start real xterm as "xterm -bdc"
$main::reset = "\033[0m"; # reset all color/bold/etc.
%main::ccolor =
map { $main::cstat[$_] => $main::ccolor[$_] } 0 .. $#main::cstat;
@main::dstat = qw(? I R S F); # Workflow states
@main::dlong = (
'Unknown', 'Unknown' # actually indeterminable
, 'Running'
, 'Success'
, 'Failure'
);
@main::dcolor = (
"\033[0;37m" # unknown (gray)
, "\033[0;36m" # indeterminable (cyan)
, "\033[0;34m" # running (blue)
, "\033[0;30m" # success (black)
, "\033[0;31m" # failure (red)
);
%main::gstat = # Globus job states (expert mode)
(
0 => '?' # unknown
, 1 => 'P' # pending
, 2 => 'A' # active
, 4 => 'F' # failed
, 8 => 'D' # done
, 16 => 'S' # suspend
, 32 => 'U' # unsuspend
, 64 => 'I' # stage-in
, 128 => 'O' # stage-out
);
@main::jobclass = (
'unknown' # 0
, 'compute' # 1
, 'stage-in' # 2
, 'stage-out' # 3
, 'register' # 4
, 'xsite-xfer' # 5
, 'createdir' # 6
, 's-compute' # 7 -- deprecated
, 'clean-up' # 8
, 'chmod' # 9
, 'subdax' # 10
, 'subdag' # 11
);
@main::jobclass_desc = (
'unknown (do not use)',
'regular computation job',
'auxilliary stage-in transfer job',
'auxilliary stage-out transfer job',
'auxilliary replica registration job',
'auxilliary inter-site transfer job',
'auxilliary createdir job',
'remote compute job (do not use)',
'auxilliary clean-up job',
'auxilliary chmod job',
'unplanned DAX sub-workflow job',
'planned DAG sub-workflow job'
);
@main::jobshort = # short job class (job type)
(
'-', 'job', 'si', 'so', 'rr', 'isx',
'cd', 'stc', 'clu', 'chm', 'dax', 'dag'
);
$main::time = $^T; # initialization only
%main::dagman_p = # predicate to determine variations on DAGMan
map { $_ => 1 } qw(pegasus-dagman condor_dagman);
%main::width = # width selection (0=unlimited)
(
dagnodename => 30 # width of concrete dag node identifiers
, pegasus_wf_name => 24 # width of abstract workflow identifiers
, cmd => 20 # width of executable that is actually run
);
$main::cache = undef; # debug
my ( $rows, $cols ) = &initialize_winch;
# %qtitle describes any head we would want to show,
# indexed by a short internal key:
# {header} is what to put into the title of the output
# {function} is an fptr, being called with current row (q) job classads
# {minwidth} is an minimal width, with negative width meaning left adjustment
# {legend} is what to display for this column in the legend
#
my %qtitle = (
'STAT' => {
header => 'STAT',
function => \&x_jobstatus,
minwidth => -4,
legend => 'Condor job status'
},
'S' => {
header => 'S',
function => \&x_cstat,
minwidth => 1,
legend => 'Condor job status'
},
'IN_STATE' => {
header => 'IN_STATE',
function => \&x_in_state,
minwidth => 8,
legend => 'Time job spent in current Condor status'
},
'JPRIO' => {
header => 'PRI',
minwidth => 3,
function => \&x_jobpriority,
legend => 'Condor job priority'
},
'PJC' => {
header => 'CLASS',
minwidth => -5,
function => \&x_pegasus_jobtype,
legend => 'Pegasus job type'
},
'PJCN' => {
header => 'C',
minwidth => 1,
function => \&x_pegasus_jobtypenum,
legend => 'Pegasus job type'
},
'PJCS' => {
header => 'PJC',
minwidth => -3,
function => \&x_pegasus_jobtypeshort,
legend => 'Pegasus job type'
},
'JOB1' => {
header => 'JOB',
minwidth => -50,
function => \&x_job1,
legend => 'Workflow- or DAG-Node ID'
},
'JOB2' => {
header => 'JOB',
minwidth => -32,
function => \&x_job2,
legend => 'DAG-Node ID, command, and workflow-ID'
},
'CONDORID' => {
header => 'ID',
minwidth => 2,
function => \&x_condorid,
legend => 'Condor cluster ID'
},
'SITE' => {
header => 'SITE',
minwidth => -5,
function => \&x_site,
legend => 'Job site'
},
'C/G' => {
header => 'C/G',
function => \&x_cgstatus,
minwidth => 3,
legend => 'Condor- and Globus job status'
}
);
# @main::qtitle is an array of default outputs, indexed by 'expert
# level'. Each entry is a key into %qtitle. (Eventually, this can
# be overwritten by a CLI option for your own mix-n-match (TBD).)
@main::qtitle = (
# first level is the novice state, leave out distractive information
[qw(STAT IN_STATE JOB1)],
# some more complex information in first expert level
[qw(CONDORID S IN_STATE JPRIO JOB2)],
# even more complex information in next expert level
[qw(CONDORID C/G IN_STATE JPRIO PJCS SITE JOB2)]
);
# %dtitle describes any head we would want to show,
# indexed by a short internal key:
# {header} is what to put into the title of the output
# {function} is an fptr, being called with current row (dag) workflow entry
# {minwidth} is an minimal width, with negative width meaning left adjustment
# {legend} is what to display for this column in the legend
#
my %dtitle = (
'DONE' => {
header => 'DONE',
function => \&y_dag_done,
minwidth => 5,
legend => 'Job completed with success'
},
'PRE' => {
header => 'PRE',
,
function => \&y_dag_pre,
minwidth => 5,
legend => 'PRE-Scripts running'
},
'QUEUED' => {
header => 'IN_Q',
,
function => \&y_dag_queued,
minwidth => 5,
legend => 'Submitted jobs'
},
'POST' => {
header => 'POST',
,
function => \&y_dag_post,
minwidth => 5,
legend => 'POST-Scripts running'
},
'READY' => {
header => 'READY',
,
function => \&y_dag_ready,
minwidth => 5,
legend => 'Jobs ready for submission'
},
'UNREADY' => {
header => 'UNRDY',
,
function => \&y_dag_unready,
minwidth => 5,
legend => 'Jobs blocked by dependencies'
},
'FAILED' => {
header => 'FAIL',
,
function => \&y_dag_failed,
minwidth => 5,
legend => 'Jobs completed with failure'
},
'TOTAL' => {
header => 'TOTAL',
function => \&y_dag_total,
minwidth => 5,
legend => 'Jobs in workflow'
},
'S_DONE' => {
header => 'SUCCESS',
function => \&y_dag_done,
minwidth => 7,
legend => 'Job completed with success'
},
'S_PRE' => {
header => 'PRE',
,
function => \&y_dag_pre,
minwidth => 7,
legend => 'PRE-Scripts running'
},
'S_QUEUED' => {
header => 'QUEUED',
,
function => \&y_dag_queued,
minwidth => 7,
legend => 'Submitted jobs'
},
'S_POST' => {
header => 'POST',
,
function => \&y_dag_post,
minwidth => 7,
legend => 'POST-Scripts running'
},
'S_READY' => {
header => 'READY',
,
function => \&y_dag_ready,
minwidth => 7,
legend => 'Jobs ready for submission'
},
'S_UNREADY' => {
header => 'UNREADY',
,
function => \&y_dag_unready,
minwidth => 7,
legend => 'Jobs blocked by dependencies'
},
'S_FAILED' => {
header => 'FAILURE',
,
function => \&y_dag_failed,
minwidth => 7,
legend => 'Jobs completed with failure'
},
'S_TOTAL' => {
header => 'TOTAL',
function => \&y_dag_total,
minwidth => 7,
legend => 'Total of jobs'
},
'S' => {
header => 'S',
function => \&y_dstat,
minwidth => 1,
legend => 'Workflow state'
},
'DOFT' => {
header => 'D/T',
function => \&y_done_total,
minwidth => 3,
legend => 'Jobs done of total'
},
'PERCENT' => {
header => '%DONE',
function => \&y_percent,
minwidth => 5,
legend => 'Success percentage'
},
'STATE' => {
header => 'STATE',
function => \&y_dlong,
minwidth => -7,
legend => 'Workflow state'
},
'EC' => {
header => 'EC',
function => \&y_status,
minwidth => 1,
legend => 'Workflow exit status'
},
'WORKFLOW' => {
header => 'DAGNAME',
function => \&y_name,
minwidth => -40,
legend => 'Name of workflow'
}
);
# @main::dtitle is an array of default outputs, currently fixed. Each
# entry is a key into %qtitle. (Eventually, this can be overwritten by a
# CLI option for your own mix-n-match (TBD).)
@main::dtitle = ( # summary mode
[qw(S_UNREADY S_READY S_PRE S_QUEUED S_POST S_DONE S_FAILED PERCENT)]
# show subdag mode
, [qw(UNREADY READY PRE QUEUED POST DONE FAILED PERCENT STATE WORKFLOW)],
);
# Added for PM-664
my %disptitle = (
'u' => 'UNREADY',
'r' => 'READY',
'pre' => 'PRE',
'post' => 'POST',
'q' => 'QUEUED',
'd' => 'DONE',
'c' => 'PERCENT',
'f' => 'FAILED',
's' => 'STATE',
'w' => 'WORKFLOW'
);
#
# --- functions --------------------------------------------
#
sub usage(;$) {
my $msg = shift;
my $flag = defined $msg && lc($msg) ne 'help';
if ($flag) {
print $main::bold if $main::color;
print "ERROR: $msg\n";
print $main::reset if $main::color;
}
my $app = basename($0);
print << "EOF";
Usage: $app [options ] [dagdir]
$app helps monitor a workflow by querying Condor and directories.
Optional arguments:
-h|--help print this help and exit.
-V|--version print version information and exit.
-w|--watch [s] repeatedly print output every 's' seconds, default 60.
-L|--[no]legend Enable or disable showing of the legends, default off.
-c|--[no]color Enable or disable ANSI colors, default off.
-U|--[no]utf8 Enable or disable UTF-8 graphics, default from \$LANG.
Optional arguments affecting Condor Q output:
-Q|--[no]queue Disable or enable Condor Q output, default is on.
-v|--verbose increase expert level.
-d|--debug increase debug level (Pegasus debugging only).
-u|--user name monitor jobs for user 'name', default is $main::user.
-i|--[no]idle Omit jobs in state 'idle' from output.
--[no]held Disable or enable showing HoldReason, default on.
--[no]heavy Disable or enable heavy Unicode lines, default on.
-j|--jobtype jt *Only show jobs of type 'jt', default is all jobs.
(run with 'jt' of 'help' to see available job types.)
-s|--site sid *Only show jobs running on site 'sid', default is all sites.
Optional arguments affecting DAG output:
rundir directory to monitor, default is CWD.
-l|--long Show all DAG states, including sub-DAGs, default only totals.
-D|--display List of columns to display in output. Works only when -l option is enabled.
Valid values are
r => READY,
u => UNREADY,
pre,
post,
q => QUEUED,
d => DONE,
c => PERCENT,
f => FAILED,
s => STATE,
w => DAGNAME
-r|--rows Show summary in rows, not columns. Mutually-exclusive wrt -l.
-S|--[no]success Omit 'Success' workflows from --long output, default show.
(*) denotes a multi-option, which may be given multiple times or comma lists.
EOF
exit( $flag ? 1 : 0 );
}
sub myversion() {
my $version = version();
print "Pegasus $version, @{[basename($0)]} $main::revision\n";
exit 0;
}
sub profile_start($) {
my $fn = shift;
if ( CORE::open( $main::profile, ">$fn" ) ) {
profile_log('start');
}
}
sub profile_log {
if ( defined $main::profile ) {
printf {$main::profile} "%s\n", join( ' ', isomsdate(), @_ );
}
}
sub profile_done {
profile_log('final');
close $main::profile;
undef $main::profile;
}
END { profile_done if defined $main::profile }
sub trim($) {
# purpose: remove leading and trailing whitespace, quotes around
# paramtr: $s (IN): a string
# returns: possibly shortened string
#
my $s = shift;
$s =~ s/^\s+//;
$s =~ s/\s+$//;
$s = substr( $s, 1, -1 ) if substr( $s, 0, 1 ) =~ /[""'']/;
$s;
}
sub commas($) {
# purpose: put commas to separate engineering dimensions
# paramtr: $x (IN): numerical string
# returns: string with commas inserted as necessary
# warning: assumes english locale
#
my $text = reverse shift();
$text =~ s/(\d{3})(?=\d)(?!\d*\.)/$1,/g;
return scalar reverse $text;
}
sub plural($$) {
# purpose: print number space item. Add plural-s if number != 1
# paramtr: $n (IN): count
# $s (IN): item string
# returns: constructed string with proper plural
#
my $n = shift;
my $s = shift;
return "$n $s" if $n == 1;
my $last = substr( $s, -1 );
if ( $last eq 'y' ) {
commas($n) . ' ' . substr( $s, 0, -1 ) . 'ies';
}
elsif ( $last eq 's' ) {
commas($n) . " ${s}es";
}
else {
commas($n) . " ${s}s";
}
}
sub initialize_winch {
# purpose: determine rows and columns of current window
# returns: ($rows,$cols)
# warning: Make sure that this function stays POSIX signal safe!
#
my $r = $ENV{LINES} || 25;
my $c = $ENV{COLUMNS} || 80;
if ($main::onatty) {
my $ws = pack( 'S!4', () );
if ( defined &TIOCGWINSZ && ioctl( STDOUT, &TIOCGWINSZ, $ws ) ) {
( $r, $c ) = unpack( "S!4", $ws );
}
}
else {
$r = $c = 1E10; # virtually unlimited
}
( $r, $c );
}
sub sigwinch {
# purpose: adjust global $rows and $cols when window size changes
# globals: $rows (OUT): new row count
# $cols (OUT): new column count
# warning: Make sure that this function stays POSIX signal safe!
# warning: Make sure the handler is only installed for ttys!
#
my $ws = pack( 'S!4', () );
if ( defined &TIOCGWINSZ && ioctl( STDOUT, &TIOCGWINSZ, $ws ) ) {
( $rows, $cols ) = unpack( "S!4", $ws );
}
}
sub interval($) {
# purpose: convert a number of seconds into days, hours, mins, secs
# paramtr: $s (IN): total number of seconds
# returns: formatted string with or without days
#
use integer;
my $total = int( shift() );
my $s = $total % 60;
my $m = ( $total % 3600 ) / 60;
if ( $total < 3600 ) {
# no days or hours
sprintf "%02d:%02d", $m, $s;
}
elsif ( $total < 86400 ) {
# no days, don't show days
sprintf "%02d:%02d:%02d", ( $total / 3600 ), $m, $s;
}
else {
my $h = ( $total % 86400 ) / 3600;
my $d = $total / 86400;
sprintf "%d+%02d:%02d:%02d", $d, $h, $m, $s;
}
}
sub fit($$) {
# purpose: fit a string into a given width, truncate start or end
# paramtr: $width (IN): maximum space
# $s (IN): input string to format
# returns: formatted string
#
my $width = shift;
my $s = shift;
my $len = length($s);
if ( $width != 0 && $len > abs($width) ) {
if ( $width < 0 ) {
# fit from back
'..' . substr( $s, ( $len + $width ) + 2 );
}
else {
# forward fit
substr( $s, 0, $width - 2 ) . '..';
}
}
else {
$s;
}
}
sub cfit($$) {
# purpose: fit a string into a given width, truncate center
# paramtr: $width (IN): maximum space
# $s (IN): string to fit
# returns: fitted string
#
my $width = abs( shift() );
my $s = shift;
my $len = length($s);
if ( $width == 0 || $len <= $width ) {
# string fits
$s;
}
else {
use integer;
my $diff = $len - $width + 2;
substr( $s, 0, ( $len - $diff ) / 2 ) . '..'
. substr( $s, ( $len + $diff ) / 2 );
}
}
sub headline($$$;$) {
# purpose: format header from 3 strings
# paramtr: $left (IN): what to put on left side
# $center (IN): what to put into center
# $right (IN): what to put on right side
# $width (opt. IN): total width (typically terminal)
# globals: $cols (IN): terminal width default
# returns: formatted string
#
my $l = shift || '';
my $c = shift || '';
my $r = shift || '';
my $width = shift || $cols;
my $llen = length($l);
my $clen = length($c);
my $rlen = length($r);
if ( $llen + $clen + $rlen > $width ) {
# FIXME: fit strings
$l . $c . $r;
}
else {
# adjust strings
use integer;
my $room = $width - $llen - $clen - $rlen;
my $x = ' ' x ( $room / 2 );
if ( ( $room & 1 ) == 1 ) {
# odd
$l . $x . ' ' . $c . $x . $r;
}
else {
# even
$l . $x . $c . $x . $r;
}
}
}
sub whittle_down(\%\@\@) {
# purpose: taken a full input set (Q or DAG), and reduce to only
# columns that we'll show
# paramtr: %title (IN): hash of all available title definitions
# @title (IN): current set of columns to show
# @input (IN): array of job classads or workflows
# returns: array of columns to show for the given input
#
my $avail = shift; # %[qd]title
my $title = shift; # @[qd]title
my $input = shift; # @q or @dags
my @result = ();
foreach my $row ( @{$input} ) {
my @y = (); # all columns go into @y
foreach my $k ( @{$title} ) {
confess "FATAL: title \"$k\" does not exist"
unless exists $avail->{$k};
push( @y, &{ $avail->{$k}->{function} }($row) );
}
push( @result, [@y] ); # a row goes into @result
}
@result;
}
sub signum($) {
# purpose: sign (lat.: signum) function
# paramtr: $x (IN) number
# returns: -1 for negative $x, +1 for positive $x and 0 for $x==0
# warning: comparison with 0 should use |x| < epsilon for floats.
#
my $x = shift;
( $x < 0 ? -1 : ( $x > 0 ? 1 : 0 ) );
}
sub column_widths(\%\@\@) {
# purpose: compute width of output column from data requirements
# paramtr: %title (IN): minimum column width comes from this
# @title (IN): currently selected set of columns
# @input (IN): whittled down input rows (array of arrays)
# globals: $main::space (IN): current column spacing
# $cols (IN): terminal width
# returns: array of column widths.
# warning: The last column is (attempted to) adjust to the screen width
#
my $avail = shift;
my $title = shift;
my $input = shift;
my @max = ();
my @sgn = ();
# start with title minimum width, separating sign and magnitude
foreach my $k ( @{$title} ) {
my $x = $avail->{$k}{minwidth};
push( @max, abs($x) );
push( @sgn, signum($x) );
}
# determine the width of each column, but no smaller than the title width
foreach my $row ( @{$input} ) {
for ( my $i = 0 ; $i < @{$row} ; ++$i ) {
my $len = length( $row->[$i] );
$max[$i] = $len if $len > $max[$i];
}
}
# fix last column to match maximum terminal width
my $s = 0;
my $l = length($main::space);
for ( my $i = 0 ; $i < @max ; ++$i ) {
$s += $max[$i] + $l;
}
if ( $s > $cols ) {
$s -= $max[$#max];
$max[$#max] = $cols - $s;
$max[$#max] = 0 if $max[$#max] < 0;
}
# return results
map { $max[$_] * $sgn[$_] } 0 .. $#max;
}
sub create_legend(\%\@) {
# purpose: show the legend based on a title (both: Q and DAG)
# paramtr: %title (IN): hash of all available title defs
# @title (IN): select titles
# globals: $cols (IN): current terminal width
# $main::color (IN): whether to use ANSI colors
# $main::bold (IN): turn on bold
# $main::reset (IN): turn off bold
# returns: scalar: string containing the legend
# array: [0] string containing legend
# [1] rows required to show legend
#
my $avail = shift; # %[qd]title ref
my $title = shift; # @[qd]title ref
my $result = '';
my $cursor = 0;
my $p = 0;
for ( my $i = 0 ; $i < @{$title} ; ++$i ) {
my $k = $avail->{ $title->[$i] }{header};
my $v = $avail->{ $title->[$i] }{legend};
my $l = length($k) + length($v);
my $s = '';
$s .= $main::bold if $main::color;
$s .= $k;
$s .= $main::reset if $main::color;
$s .= ': ' . $v;
if ( $p + $l + 2 > $cols ) {
$result .= "\n$s";
++$cursor;
$p = $l + 2;
}
else {
$result .= ' ' if $i;
$result .= $s;
$p += $l + 3;
}
}
$result .= "\n\n";
$cursor += 2;
wantarray ? ( $result, $cursor ) : $result;
}
sub kickstart($) {
# purpose: remove kickstart arguments from commandline
# paramtr: job classad 'Arguments' value
# returns: remaining commandline, with kickstart removed
# warning: also applies 'basename' to all absolute filenames
#
my @arg = split /\s+/, shift(); # FIXME: deal with quoting properly!
my @result = ();
my $state = 0;
for ( my $i = 0 ; $i < @arg ; ++$i ) {
if ( $state == 0 ) {
if ( substr( $arg[$i], 0, 1 ) eq '-' ) {
my $opt = substr( $arg[$i], 1, 1 );
if ( index( 'ioelnNRBLTIwWSs', $opt ) >= 0 ) {
# skip argument
++$i;
}
elsif ( index( 'HVX', $opt ) >= 0 ) {
# do nothing
}
else {
warn "Warning: Unknown kickstart argument $arg[$i]\n";
}
}
else {
# this better be the application that we are starting
$state = 1;
push( @result, basename( $arg[$i] ) );
}
}
else {
# we can only apply basename to absolute filenames, because
# those are the only element we can recognize as such.
if ( substr( $arg[$i], 0, 1 ) eq $main::dirsep ) {
push( @result, basename( $arg[$i] ) );
}
else {
push( @result, $arg[$i] );
}
}
}
wantarray ? @result : join( ' ', @result );
}
sub seqexec(\%) {
# purpose: count number of jobs in seqexec input file
# paramtr: %r (IN): job class ad representation
# returns: number of seqexec sub-jobs
#
my $r = shift;
my $result = 0;
local (*S);
my $fn = File::Spec->rel2abs( $r->{in}, $r->{iwd} );
profile_log("open $fn") if defined $main::profile;
if ( open( S, "<$fn" ) ) {
my @ok = ();
while (<S>) {
s/[ \r\n]+$//;
s/\#.*//;
next if length($_) < 3;
push( @ok, $_ );
}
close S;
$result = @ok + 0;
}
else {
warn "Warning: open $fn: $!, skipping\n"
if $main::debug > 3;
}
$result;
}
sub cstat($) {
# purpose: parse condor job state into string.
# paramtr: $s (IN): job classad 'JobStatus'
# returns: string representing Condor job state
#
my $s = shift;
$s < @main::cstat ? $main::cstat[$s] : "$s";
}
sub gstat($) {
# purpose: parse condor job globus state into string.
# paramtr: $s (IN): job classad 'GlobusStatus' (may be undef)
# returns: string representing Globus job state
#
my $s = shift;
if ( defined $s ) {
exists $main::gstat{$s} ? $main::gstat{$s} : "$s";
}
else {
'-';
}
}
sub parsersl($) {
# purpose: Parse a Globus RSL string into hash
# paramtr: $rsl (IN): RSL string
# returns: hash representing RSL values
# warning: all keys will be canonicalized
#
my %result = ();
local $_ = shift;
while (/\(([^)]+)\)/g) {
my ( $k, $v ) = split /=/, $1, 2;
$k =~ s/[-_]//g;
$result{ lc $k } = $v;
}
%result;
}
sub condor_q(\%\%\@;%) {
# purpose: Parse entire Condor-Q into hash of job classad hashes
# paramtr: %jobs (OUT): parsed job classads indexed by 'clusterid'
# %dags (OUT): maps dagmanjobid to array of clusterids
# @t (IN): ask condor_q only for these keys
# %flag (IN): key value pairs controlling behavior
# globals: $main::user (IN): which user to limit output to
# %qtitle (IN): determines which keys to ask for
#
my $jobref = shift;
my $dagref = shift;
my $t = shift;
my %flags = (@_);
my $constraint = '';
# determine root wf uuid from workdir
if ( exists $flags{rootuuid} ) {
my $s = '';
foreach my $n ( @{ $flags{rootuuid} } ) {
$s .= ' || ' if $s;
$s .= "(pegasus_root_wf_uuid=?=\\\"$n\\\")";
}
if ($s) {
if ($constraint) {
$constraint .= " && ( $s )";
}
else {
$constraint = "( $s )";
}
}
}
# determine extra jobclass constraints
if ( exists $flags{jobtypes} ) {
my $s = '';
foreach my $n ( @{ $flags{jobtypes} } ) {
$s .= ' || ' if $s;
$s .= "(pegasus_job_class=?=$n)";
}
if ($s) {
if ($constraint) {
$constraint .= " && ( $s )";
}
else {
$constraint = "( $s )";
}
}
}
# determine extra jobsites constraints
if ( exists $flags{jobsites} ) {
my $s = '';
foreach my $site ( @{ $flags{jobsites} } ) {
$s .= ' || ' if $s;
$s .= "(pegasus_site=?=\\\"$site\\\")";
}
if ($s) {
if ($constraint) {
$constraint .= " && ( $s )";
}
else {
$constraint = "( $s )";
}
}
}
# finalize constraints
if ($constraint) {
$constraint = "-constraint \"$constraint\"";
}
local (*Q);
my $condor_q = find_exec('condor_q')
|| die "FATAL: Unable to find 'condor_q' in your PATH.\n";
if ( defined $main::cache && $main::cache ) {
# see --cache flag -- THIS IS ONLY FOR DEBUGGING
open( Q, $main::cache ) || die "open $main::cache: $!\n";
}
else {
# FIXME: 'condor_q' is expensive. Find better restrictions!
warn "# $condor_q -l $main::user $constraint\n" if $main::debug;
open( Q, "$condor_q -l $main::user $constraint|" )
|| die
"FATAL: Unable to execute $condor_q -l $main::user $constraint: $!\n";
}
my ( %db, @x );
while (<Q>) {
s/[\r\n]+$//; # safe chomp
if ( length($_) > 2 and substr($_, 0, 2) ne "--") {
# regular job classad
@x = split /\s+=\s+/, $_, 2;
die "this must not happen!" if exists $db{ lc( $x[0] ) };
$db{ lc( $x[0] ) } = trim( $x[1] );
}
else {
my $id = $db{clusterid};
# skip empty ads
next unless defined $id;
# noidle for Mats
unless ( $flags{noidle} && $db{jobstatus} == 1 ) {
# add parsed job classads to %job
$jobref->{$id} = {%db};
# Add job belonging to a dagman to %dag
if ( exists $db{dagmanjobid} ) {
# In HTConodor 8 and above, we might see a child before
# the dag parent in the condor_q -l output
$dagref->{ $db{dagmanjobid} } = []
unless exists $dagref->{ $db{dagmanjobid} };
push( @{ $dagref->{ $db{dagmanjobid} } }, $id );
}
else {
# we need this branch for Condor jobs not managed by
# DAGMan, or for Condor jobs whose parent DAGMan died.
$dagref->{$id} = [] unless exists $dagref->{$id};
}
}
# bookeeping
if ( exists $flags{count} ) {
$flags{count}{condor}{ $db{jobstatus} }++;
$flags{count}{all}{condor}++;
if ( exists $db{globusstatus} ) {
$flags{count}{globus}{ $db{globusstatus} }++;
$flags{count}{all}{globus}++;
}
}
# prepare for next round
%db = ();
}
}
# extra sanity?
warn "Warning: Maybe condor_q output formatting changed?"
if scalar keys %db;
close Q;
if ($main::debug) {
warn "Warning: condor_q returned ", parse_exit($?), "\n" if $?;
}
}
sub find_leaves(\%) {
# purpose: determine which are the top-level jobs to show
# paramtr: %dag (IN): dag dependencies
# returns: hash of leave jobs in queue
#
my $dagref = shift;
# find children and parents that are dags
my ( %parent, %leaves );
foreach my $d ( keys %{$dagref} ) {
foreach my $v ( @{ $dagref->{$d} } ) {
$parent{$v}{$d} = 1 if exists $dagref->{$v};
}
}
# find leaves
my @fifo = keys %{$dagref};
while (@fifo) {
my $d = pop(@fifo);
if ( exists $parent{$d} ) {
push( @fifo, keys %{ $parent{$d} } );
}
else {
$leaves{$d} = 1;
}
}
%leaves;
}
sub assemble_job($;$) {
# purpose: create the data columns for a given job
# paramtr: $r (IN): job classad hashref
# $indent (IN): what to use for indentation
# returns: updated job classad hashref
#
my $r = shift; # job classad
my $indent = shift || '';
# extra sanity?
confess "no job?" unless scalar keys %{$r};
$r->{_indent} = $indent;
$r;
}
sub assemble_dag($$$;$$); # { }
sub assemble_dag($$$;$$) {
# purpose: create the data rows for a given dag job
# paramtr: %job (IN): see condor_q
# %dag (IN): see condor_q
# $dagid (IN): which workflow to assemble
# $lastp (opt. IN): last job in parent workflow
# $indent (opt. IN): what to use for indentation
# returns: ordered list (rows) of job classad refs (cols)
#
my $jobref = shift;
my $dagref = shift;
my $dagid = shift;
my $lastp = shift;
my $indent = shift || '';
my @result = ();
# show dagman itself
push( @result, assemble_job( $jobref->{$dagid}, $indent ) )
if scalar keys %{$jobref->{$dagid}};
delete $main::seen{$dagid};
# show dependent jobs for dagman
# $indent = $main::graph[2] x ( length($indent) / length($main::graph[0]) );
substr( $indent, -3 ) = $main::graph[ 2 + $lastp ] if $indent;
my @x = sort { $a <=> $b } @{ $dagref->{$dagid} };
for ( my $j = 0 ; $j < @x ; ++$j ) {
# extra sanity?
die "unknown job" unless scalar keys %{ $jobref->{ $x[$j] } };
my $conn = $main::graph[ $j == $#x ];
if ( exists $dagref->{ $x[$j] } ) {
push(
@result,
assemble_dag(
$jobref, $dagref, $x[$j], ( $j == $#x ),
"$indent$conn"
)
);
}
else {
push( @result,
assemble_job( $jobref->{ $x[$j] }, "$indent$conn" ) );
}
delete $main::seen{ $x[$j] };
}
@result;
}
sub x_site {
my $row = shift;
$row->{'pegasus_site'} || '-';
}
sub x_pegasus_jobtype {
my $row = shift;
my $c = $row->{'pegasus_job_class'} + 0;
$c < @main::jobclass ? $main::jobclass[$c] : "$c";
}
sub x_pegasus_jobtypeshort {
my $row = shift;
my $c = $row->{'pegasus_job_class'} + 0;
$c < @main::jobshort ? $main::jobshort[$c] : "$c";
}
sub x_pegasus_jobtypenum {
my $row = shift;
$row->{'pegasus_job_class'} || '-';
}
sub x_in_state {
my $row = shift;
interval( $main::time - $row->{enteredcurrentstatus} );
}
sub x_jobpriority {
my $row = shift;
$row->{jobprio};
}
sub x_jobstatus {
my $row = shift;
my $s = $row->{jobstatus};
$s < @main::clong ? $main::clong[$s] : "$s";
}
sub x_cstat {
my $row = shift;
cstat( $row->{jobstatus} );
}
sub x_cgstatus {
my $row = shift;
cstat( $row->{jobstatus} ) . '/' . gstat( $row->{globusstatus} );
}
sub x_condorid {
my $row = shift;
$row->{clusterid};
}
sub x_job1 {
my $row = shift;
my $result = '';
if ( exists $row->{dagnodename} ) {
$result = $row->{dagnodename};
}
elsif ( exists $row->{'pegasus_wf_name'} ) {
$result = $row->{'pegasus_wf_name'};
}
else {
my $cmd = basename( $row->{cmd} || '' );
if ( $cmd eq 'kickstart' ) {
my @x = kickstart( $row->{arguments} );
$result = '*' . $x[0];
}
else {
$result = $cmd;
}
}
if ($main::color) {
if ( $row->{'pegasus_job_class'} > 9 ) {
"\033[0;37m"
. $row->{_indent}
. $main::reset
. $result
. $main::ccolor[ $row->{jobstatus} ];
}
else {
"\033[0;37m"
. $row->{_indent}
. $main::ccolor[ $row->{jobstatus} ]
. $result;
}
}
else {
$row->{_indent} . $result;
}
}
sub x_job2 {
my $row = shift;
my $result = '';
# show dagnodename first
if ( exists $row->{dagnodename} ) {
$result .= cfit( $main::width{dagnodename}, $row->{dagnodename} );
}
elsif ( exists $row->{'pegasus_wf_name'} ) {
$result .=
cfit( $main::width{'pegasus_wf_name'}, $row->{'pegasus_wf_name'} );
}
# replace commandline ('cmd' and 'arguments')
my $cmd = basename( $row->{cmd} || '' );
if ( $cmd eq 'kickstart' ) {
$cmd = ( kickstart( $row->{arguments} ) )[0];
$result .= ' [*' . cfit( $main::width{cmd}, $cmd ) . ']';
}
else {
$result .= ' [' . cfit( $main::width{cmd}, $cmd );
if ( exists $row->{'pegasus_cluster_size'} ) {
my $n = $row->{'pegasus_cluster_size'} + 0;
if ( $cmd eq 'seqexec' || $n > 1 ) {
$result .= ": $n";
}
}
$result .= ']';
}
if ($main::color) {
if ( $row->{'pegasus_job_class'} > 9 ) {
"\033[0;37m"
. $row->{_indent}
. $main::reset
. $result
. $main::ccolor[ $row->{jobstatus} ];
}
else {
"\033[0;37m"
. $row->{_indent}
. $main::ccolor[ $row->{jobstatus} ]
. $result;
}
}
else {
$row->{_indent} . $result;
}
}
sub q_print_debug($$$$\%) {
# purpose: show job classads of certain matches for current job
# paramtr: $cursor (IN): current row
# $reserve (IN): how much space to reserve
# $watch (IN): are we in watch mode?
# $match (IN): regular expression of classads to match
# %q[i] (IN): current job class ads
# globals: $main::color (IN): whether to use ANSI colors
# $cols (IN): current terminal width
# $rows (IN): current terminal height
# returns: new cursor position
#
my $cursor = shift; # current row
my $reserve = shift; # current $reserve
my $watch = shift; # current $watch
my $match = shift; # what classads to match
my $qi = shift; # $q[$i] ref
my $p = $cols + $cols;
my ($s);
foreach my $k ( sort keys %{$qi} ) {
if ( $watch && $cursor > $rows - $reserve - 1 ) {
print " ..";
last;
}
if ( $k =~ /$match/o ) {
my $v = $qi->{$k};
my $l = length($k) + length($v);
$s = '';
$s .= "\033[1;30m" if $main::color;
$s .= $k;
$s .= $main::reset if $main::color;
$s .= '=' . $v;
if ( $p + $l + 2 > $cols ) {
print "\n\t$s";
++$cursor;
$p = $l + 9;
}
else {
print " $s";
$p += $l + 2;
}
}
}
$cursor;
}
sub q_print_summary($\%) {
# purpose: print summary line adding stats of Condor and Condor-G
# paramtr: $cursor (IN): current row
# %count (IN): queue statistics
# globals: $main::color (IN): whether to use ANSI colors
# @main::ccolor (IN): color settings
# $main::reset (IN): undo colorings
# returns: new cursor position
#
my $cursor = shift; # current row
my $cref = shift; # %count ref
# create Condor job summary
print "Summary: ", plural( $cref->{all}{condor}, 'Condor job' ), " total";
my $f = 0;
foreach my $c ( sort { $a <=> $b } keys %{ $cref->{condor} } ) {
print( $f++ ? ' ' : ' (' );
print $main::ccolor[$c] if $main::color;
print $main::cstat[$c], ':', commas( $cref->{condor}{$c} );
print $main::reset if $main::color;
}
print ')' if $f;
# Globus job summary
if ( exists $cref->{all}{globus} && $cref->{all}{globus} > 0 ) {
print ", ", plural( $cref->{all}{globus}, 'Condor-G job' );
$f = 0;
foreach my $g ( sort { $a <=> $b } keys %{ $cref->{globus} } ) {
print( $f++ ? ' ' : ' (' );
print $main::gstat{$g}, ':', commas( $cref->{globus}{$g} );
}
print ')' if $f;
}
print "\n";
++$cursor;
}
sub dag_recurse(\@$$); # { }
sub dag_recurse(\@$$) {
local (*DIR);
my $dirsref = shift;
my $dir = shift;
my $level = shift;
profile_log("opendir $dir") if defined $main::profile;
if ( opendir( DIR, $dir ) ) {
my ( $file, $full );
while ( defined( $file = readdir(DIR) ) ) {
next if ( $file eq '.' || $file eq '..' );
next if ( $file =~ /\.\d{3}$/ ); # NEW
$full = File::Spec->catfile( $dir, $file );
if ( -d $full ) {
dag_recurse( @{$dirsref}, $full, $level + 1 );
}
elsif ( $file =~ /\.dag\.dagman\.out$/ ) {
push( @{ $dirsref->[$level] }, $full );
}
}
closedir DIR;
}
else {
warn "Warning: Unable to open $dir: $!, ignoring\n";
}
}
sub dag_get_subdag(\@$$) {
my $dirsref = shift;
my $dag = shift;
my $level = shift;
local (*F);
profile_log("open $dag") if defined $main::profile;
if ( open( F, "<$dag" ) ) {
my @subdags = ();
while (<F>) {
push( @subdags, $1 )
if /^SUBDAG EXTERNAL \S+ (\S+\.dag)($| DIR)/;
}
close F;
foreach my $s (@subdags) {
my $dagman = $s . '.dagman.out';
push( @{ $dirsref->[$level] }, $dagman )
if ( -e $dagman && -f _ && -r _ && !-z _ );
}
}
else {
warn "Warning: open $dag: $!, ignoring\n";
}
}
sub dag_process_tab(@) {
my @keys = split /\s+/, shift();
shift; # unused
my @vals = split /\s+/, shift();
my @result = ();
my $state = 0;
my $total = 0;
for ( my $i = 0 ; $i < @keys ; ++$i ) {
# find where keys start
++$state if lc( $keys[$i] ) eq 'done';
next unless $state;
# keep ordering by using an array (that is convertible into a
# hash). However, remove any punctuation stuff from keys
$keys[$i] =~ s/[^[:alnum:]]//g;
push( @result, lc( $keys[$i] ) => $vals[$i] );
$total += $vals[$i];
}
( @result, 'total', $total );
}
my $re1 =
qr{\*\scondor_scheduniv_exec\.([0-9.]+)\s\(CONDOR_DAGMAN\)\sSTARTING\sUP};
my $re2 =
qr{\*\scondor_scheduniv_exec\.([0-9.]+)\s\(condor_DAGMAN\)\spid\s\d+\sEXITING\sWITH\sSTATUS\s(\S+)};
sub dag_status($$;%) {
my $run = shift;
my $dagfn = shift;
my %flags = (@_); # optional
my @dirs = ();
dag_recurse( @dirs, $run, 0 );
dag_get_subdag( @dirs, File::Spec->catfile( $run, $dagfn ), 1 );
my $dolen = length('.dagman.out');
my @result = ();
my $lastfn = $dirs[0][0]; # master workflow
foreach my $d ( reverse @dirs ) {
next unless defined $d;
foreach my $fn ( @{$d} ) {
my @tab = ();
my ( $start, $final, $pid, $status );
local (*F);
profile_log("open $fn") if defined $main::profile;
if ( open( F, "<$fn" ) ) {
while (<F>) {
# none of these will be in the same line. order by frequency
if ( index( $_, 'Done' ) > 0 ) {
$tab[0] = $_;
$tab[1] = <F>;
$tab[2] = <F>;
}
elsif (/$re1/o) {
( $start, $final ) = ( $1, '' );
}
elsif (/\*\*\s+PID\s+=\s+(\d+)/) {
$pid = $1;
}
elsif (/$re2/o) {
( $final, $status ) = ( $1, $2 );
}
}
close F;
}
else {
warn "Warning: open $fn: $!\n";
}
my $short = (
$fn =~ /^$run/o
? substr( $fn, length($run) + 1, -$dolen )
: substr( $fn, 0, -$dolen )
);
my $state = 0; # unknown
if ( $start ne $final ) {
if ( kill( 0, $pid ) ) {
$state = 2; # running
}
else {
$state = 1; # undeterminable
}
}
else {
# finished: success (3) or failure (4)
$state = ( $status == 0 ? 3 : 4 );
}
# I need this separately for bookeeping
my %detail = dag_process_tab(@tab);
# tinker with the job count. The "master" workflow dagman is
# not counted in any of job counts, yet it does appear in
# the Condor Q.
if ( $fn eq $lastfn ) {
if ( $state == 0 ) {
# map unknown to unready
$detail{unready}++;
}
elsif ( $state == 1 || $state == 2 ) {
# map interdeterminate and running to queued
$detail{queued}++;
}
elsif ( $state == 3 ) {
# map success to done
$detail{done}++;
}
elsif ( $state == 4 ) {
# map failure to failed
$detail{failed}++;
}
$detail{total}++;
# tag root workflow that we included itself by asterisk
$short = '*' . $short;
}
# nosuccess for my own sanity -- and maybe Mats?
unless ( $state == 3 && $flags{nosuccess} ) {
push(
@result,
{
name => $short,
state => $state,
status => $status # may be undef
,
detail => {%detail}
}
);
}
# bookeeping
if ( exists $flags{count} ) {
$flags{count}{'_state'}[$state]++;
$flags{count}{'_total'}++;
while ( my ( $k, $v ) = each %detail ) {
$flags{count}{$k} += $v;
}
}
}
}
@result;
}
sub y_dag_done {
my $dag = shift;
commas( $dag->{detail}->{done} || 0 );
}
sub y_dag_pre {
my $dag = shift;
commas( $dag->{detail}->{pre} || 0 );
}
sub y_dag_queued {
my $dag = shift;
commas( $dag->{detail}->{queued} || 0 );
}
sub y_dag_post {
my $dag = shift;
commas( $dag->{detail}->{post} || 0 );
}
sub y_dag_ready {
my $dag = shift;
commas( $dag->{detail}->{ready} || 0 );
}
sub y_dag_unready {
my $dag = shift;
commas( $dag->{detail}->{unready} || 0 );
}
sub y_dag_failed {
my $dag = shift;
commas( $dag->{detail}->{failed} || 0 );
}
sub y_dag_total {
my $dag = shift;
commas( $dag->{detail}->{total} || 0 );
}
sub y_percent {
my $dag = shift;
my $done = $dag->{detail}->{done} + 0;
my $total = $dag->{detail}->{total} + 0;
my $percent = ( $total == 0 ) ? 0 : ( 100.0 * $done / $total );
sprintf "%.1f", $percent;
}
sub y_done_total {
my $dag = shift;
commas( $dag->{detail}->{done} || 0 ) . '/'
. commas( $dag->{detail}->{total} || 0 );
}
sub y_dstat {
my $dag = shift;
my $s = $dag->{state} + 0;
$s < @main::dstat ? $main::dstat[$s] : '';
}
sub y_dlong {
my $dag = shift;
my $s = $dag->{state} + 0;
$s < @main::dlong ? $main::dlong[$s] : '';
}
sub y_status {
my $dag = shift;
my $x = $dag->{status};
defined $x ? parse_exit($x) : 'n.a';
}
sub y_name {
my $dag = shift;
my $result = $dag->{name} || '';
$result;
}
sub dag_print_summary($\%) {
# purpose: print summary line adding stats of workflows
# paramtr: $cursor (IN): current row
# %count (IN): queue statistics
# globals: $main::color (IN): whether to use ANSI colors
# @main::dcolor (IN): color settings
# $main::reset (IN): undo colorings
# returns: new cursor position
#
my $cursor = shift; # current row
my $totals = shift; # %totals ref
# create workflow summary
print( "Summary: ", plural( $totals->{'_total'}, 'DAG' ), " total" );
if ( $totals->{'_total'} > 0 ) {
my $f = 0;
for ( my $i = 0 ; $i < @main::dcolor ; ++$i ) {
my $x = $totals->{_state};
if ( $x->[$i] > 0 ) {
print( $f++ ? ' ' : ' (' );
print $main::dcolor[$i] if $main::color;
print $main::dlong[$i], ':', commas( $x->[$i] );
print $main::reset if $main::color;
}
}
print ")" if $f;
}
print "\n";
++$cursor;
}
#
# --- main -------------------------------------------------
#
binmode( STDOUT, ':utf8' ) if $main::isutf8;
# parse CLI options
my $heldinfo = 1;
my $heavy = 1;
my $queue = 1;
my $showidle = 1;
my $success = 1;
$main::expert = 0;
my $legend = 0;
my $show_subdag = 0;
my $classads = 0;
my $vertical = 0;
my @display_col = ();
my ( $watch, @jobtypes, @jobsites );
GetOptions(
'help|h' => \&usage,
'user|u=s' => \$main::user,
'debug|d+' => \$main::debug,
'verbose|v+' => \$main::expert,
'color|c!' => \$main::color,
'utf8|U!' => \$main::isutf8,
'version|V' => \&version,
'classad|ca+' => \$classads,
'jobtype|jobclass|j=s' => \@jobtypes,
'site|s=s' => \@jobsites,
'idle|i!' => \$showidle,
'success|S!' => \$success,
'legend|L!' => \$legend,
'queue|Q!' => \$queue,
'hold|held!' => \$heldinfo,
'heavy!' => \$heavy,
'display|D:s' => \@display_col,
'profile=s' => sub { profile_start( $_[1] ) },
# the next two options are mutually exclusive
,
'long|l!' => \$show_subdag,
'rows|row|r!' => \$vertical,
'watch|w:i' => sub {
if ( !$main::onatty ) {
warn "FATAL: --watch requires a terminal for output\n";
exit 42;
}
else {
unless ( defined &TIOCGWINSZ ) {
warn(
"Info: Your Perl installation is incomplete. Your sysadmin could\n",
"run h2ph with proper args to create sys/ioctl.ph and friends.\n"
);
sleep(3);
}
}
$watch = $_[1] || 60; # once a minute is almost too often
}
# the next option is for internal debugging only
,
'cache=s' => \$main::cache
);
binmode( STDOUT, ':utf8' ) if $main::isutf8;
# if both are (mistakenly) specified, --long wins over --rows
$vertical = 0 if ( $show_subdag && $vertical );
#
# If the user specified any form of job type/class limitations...
#
if ( @jobtypes > 0 ) {
# make keys unique, merge comma lists
my %temp = map { lc($_) => 1 } split( /,/, join( ',', @jobtypes ) );
# determine valid inputs from @main::job{class,short} and numerical
my %valid = (
( map { $main::jobclass[$_] => $_ } 0 .. $#main::jobclass ),
( map { $main::jobshort[$_] => $_ } 0 .. $#main::jobshort ),
( map { $_ => $_ } 0 .. $#main::jobclass )
);
# determine, if there were any invalid job classes
my @invalid = ();
foreach my $k ( keys %temp ) {
push( @invalid, $k ) unless ( $k eq 'help' || exists $valid{$k} );
}
if ( exists $temp{help} || @invalid ) {
# this path if 'help' was specified or invalid class specs found
print "\n";
# deal with, if any, invalid job class specs
if (@invalid) {
print 'ERROR: ', plural( @invalid, 'unrecognized job class' );
print ': ', join( ', ', @invalid ), "\n\n";
}
# print list of supported job class specs (omit unknown)
print "List of recognized job classes:\n\n";
printf "%2s %-5s %-10s %s\n", 'NR', 'SHORT', 'LONG', 'DESCRITPION';
for ( my $i = 1 ; $i < @main::jobclass ; ++$i ) {
printf( "%2d %-5s %-10s %s\n",
$i, $main::jobshort[$i], $main::jobclass[$i],
$main::jobclass_desc[$i] );
}
print "\n";
# in case of invalid spec, exit with an error. 'help' is not an error.
exit( @invalid ? 1 : 0 );
}
else {
# all keys look kosher, translate into numbers
@jobtypes = sort { $a <=> $b } map { $valid{$_} } keys %temp;
}
}
#
# If the user specified site limitations, unique specs
#
if (@jobsites) {
@jobsites = sort keys %{
{
map { $_ => 1 }
split( /,/, join( ',', @jobsites ) )
}
};
}
# react to changes in terminal size
$SIG{WINCH} = \&sigwinch if ( defined &TIOCGWINSZ && $main::onatty );
# mess with verbosity (expert level) on SIGUSR
$SIG{USR1} = sub { ++$main::expert };
$SIG{USR2} = sub { $main::expert-- };
# experts don't need spaces :-P
$main::space = ' ' if $main::expert;
# determine UTF-8 capabilities
if ($main::isutf8) {
# Draw UTF-8 graphics
# Warning: These are the unicode strings that require 'use utf8;'
if ($heavy) {
@main::graph = ( " ┣━", " ┗━", " ┃ ", " " );
}
else {
@main::graph = ( " ├─", " └─", " │ ", " " );
}
}
else {
# Assume ASCII graphics
@main::graph = ( ' |-', ' \_', ' | ', ' ' );
}
# Default $rundir to cwd if nothing was specified
my $run = @ARGV ? abs_path( shift() ) : getcwd();
my %braindb = slurp_braindb($run);
my @rootuuid = ();
if ( scalar keys %braindb ) {
# we have a rundir
push( @rootuuid, $braindb{'root_wf_uuid'} )
if exists $braindb{'root_wf_uuid'};
}
else {
# no valid rundir
undef $run;
}
# POST-condition: $run is defined if it is a valid rundir
# FIXME: Extend to permit multiple rundirs a la @ARGV
for ( my $cursor = 1 ; ; $cursor = 1 ) {
my ( %ccount, %job, %dag, @result, @dags ) = ();
my %dcount = (
_state => [ map { 0 } @main::dstat ],
_total => 0
);
# what level of expertise (output, verbose mode). Eventually a CLI
# option will permit to use your own mix-n-match output (TBD).
my @qtitle = @{ $main::qtitle[$main::expert] };
my @dtitle = @{ $main::dtitle[$show_subdag] };
# User has specified which columns should be visible.
@display_col = split( /,/, join( ',', @display_col ) );
if ( $show_subdag && @display_col > 0 ) {
my $column;
my $ind = 0;
my %unique;
$#dtitle = -1;
foreach $column (@display_col) {
$column = lc($column);
if ( exists( $disptitle{$column} ) ) {
# Avoid showing same column more than once.
if ( !exists( $unique{$column} ) ) {
@dtitle[ $ind++ ] = $disptitle{$column};
}
}
else {
# Avoid showing warning for the same column more than once.
if ( !exists( $unique{$column} ) ) {
warn "Invalid display column '$column'. Ignoring...";
}
}
$unique{$column} = 1;
}
}
my @q = ();
if ($queue) {
# collect information from condor_q
profile_log('start condor_q') if defined $main::profile;
condor_q(
%job, %dag, @qtitle
,
noidle => !$showidle
,
count => \%ccount
,
( @jobtypes ? ( jobtypes => \@jobtypes ) : () )
, ( @jobsites ? ( jobsites => \@jobsites ) : () )
, ( @rootuuid ? ( rootuuid => \@rootuuid ) : () )
);
profile_log("final condor_q ($?)") if defined $main::profile;
# %main::seen is for sanity checks
%main::seen = map { $_ => 1 } keys %job;
# collect data to show into @q
profile_log("start Q sorting") if defined $main::profile;
my %leaves = find_leaves(%dag);
foreach my $id ( sort { $a <=> $b } keys %leaves ) {
push( @q, assemble_dag( \%job, \%dag, $id ) );
}
profile_log("final Q sorting") if defined $main::profile;
}
# collect data from $rundir (if applicable)
if ( defined $run ) {
profile_log("start dag dir traversal") if defined $main::profile;
@dags = dag_status(
$run, $braindb{dag},
nosuccess => !$success,
count => \%dcount
);
profile_log("final dag dir traversal") if defined $main::profile;
}
# construct legends and legend sizes according to terminal
my ( $qlegend, $ql_size, $dlegend, $dl_size ) = ( '', 0, '', 0 );
if ($legend) {
( $qlegend, $ql_size ) = create_legend( %qtitle, @qtitle );
( $dlegend, $dl_size ) = create_legend( %dtitle, @dtitle );
}
# empty screen and print "Ctrl+C" and date header
my $reserve = 5;
if ( defined $watch ) {
( $rows, $cols ) = initialize_winch();
print "\033[2J\033[H";
$main::time = CORE::time();
my $now = scalar localtime($main::time);
my $msg = "Press Ctrl+C to exit";
print headline( $msg, "(pid=$$)", $now, $cols ), "\n\n";
$cursor += 2;
if ($show_subdag) {
my $nd = @dags;
$reserve += $dl_size + $nd + 2;
}
elsif ($vertical) {
$reserve += $dl_size + 9;
}
else {
$reserve += $dl_size + 3;
}
}
# Are there are Condor jobs in the Q
if ( @q > 0 ) {
profile_log("start Q printing") if defined $main::profile;
# create data to actually show from potentially larger set
@result = whittle_down( %qtitle, @qtitle, @q );
# determine dynamic column widths
my @max = column_widths( %qtitle, @qtitle, @result );
# print legend (requested by Ewa)
if ($legend) {
print $qlegend;
$cursor += $ql_size;
}
# print headers
print $main::bold if $main::color;
for ( my $i = 0 ; $i < @max ; ++$i ) {
print $main::space if $i;
printf "%*s", $max[$i], $qtitle{ $qtitle[$i] }{header};
}
print $main::reset if $main::color;
print "\n";
++$cursor;
# print each row of results
for ( my $i = 0 ; $i < @result ; ++$i ) {
my $jobstatus = $q[$i]->{jobstatus};
# decide on color for row and print data columns
print $main::ccolor[$jobstatus] if $main::color;
for ( my $j = 0 ; $j < @{ $result[$i] } ; ++$j ) {
print $main::space if $j;
printf "%*s", $max[$j], $result[$i][$j];
}
# HELD jobs get a separate line with the hold reason
if ( $heldinfo && $jobstatus == 5 ) {
my $tile = $main::graph[1];
print "\n", $tile,
fit( $cols - length($tile), $q[$i]{holdreason} );
++$cursor;
}
# reset color after this
print $main::reset if $main::color;
# transient trickery for classads mode
if ($classads) {
my $m =
$classads == 1
? qr{^(?:pegasus|wf)_}
: qr{^(?:(?:pegasus|wf)_|job|globus)};
$cursor =
q_print_debug( $cursor, $reserve, $watch, $m, %{ $q[$i] } );
}
# terminate current line
print "\n";
++$cursor;
# skip rest of output if reaching bottom of current terminal
if ( $watch
&& @result > $rows - $reserve
&& $cursor > $rows - $reserve )
{
print "(", plural( @result - $i, 'additional job' );
print " omitted.)\n";
++$cursor;
last;
}
}
# create summaries from %ccount
$cursor = q_print_summary( $cursor, %ccount );
profile_log("final Q printing") if defined $main::profile;
}
else {
# nothing in Q
if ($queue) {
print "(no matching jobs found in Condor Q)\n";
++$cursor;
}
}
# are we sane?
warn "\n(Debug: I appear to be missing some jobs)\n"
if ( scalar %main::seen );
if ( @q > 0 && $dcount{'_total'} > 0 ) {
# separate the two sections
print "\n";
++$cursor;
}
# Is there state in the rundir (is there a rundir)?
$reserve = 5;
if ( $dcount{'_total'} ) {
local $main::space = ' '; # temporarily scoped overwrite
profile_log("start DAG printing") if defined $main::profile;
my $is_complete = 1;
my $dag;
foreach $dag (@dags) {
# If state is <= 2 i.e. Undefined , Undefined (Indeterminable), or Running
# mark completion flag as false.
if ( $dag->{state} <= 2 ) {
$is_complete = 0;
}
}
if ($is_complete) {
undef $watch;
}
# create pseudo-row (last row) with totals
push(
@dags,
{
name => "TOTALS (" . plural( $dcount{'total'}, 'job' ) . ')',
state => 42,
status => undef,
detail => \%dcount
}
);
# create data to actually show from larger set
@result = whittle_down( %dtitle, @dtitle, @dags );
# determine dynamic column widths
my @max = column_widths( %dtitle, @dtitle, @result );
# print legend (requested by Ewa)
if ($legend) {
print $dlegend;
$cursor += $dl_size;
}
# print headers
unless ($vertical) {
print $main::bold if $main::color;
for ( my $i = 0 ; $i < @max ; ++$i ) {
print ' ' if $i;
printf "%*s", $max[$i], $dtitle{ $dtitle[$i] }{header};
}
print $main::reset if $main::color;
print "\n";
++$cursor;
}
# print each row of results
if ($show_subdag) {
# exclude pseudo-row with total from this part
for ( my $i = 0 ; $i < $#result ; ++$i ) {
my $dagstate = $dags[$i]->{state};
# decide on a color for row and print data columns
print $main::dcolor[$dagstate] if $main::color;
for ( my $j = 0 ; $j < @{ $result[$i] } ; ++$j ) {
print ' ' if $j;
if ( $j == $#max
&& length( $result[$i][$j] ) > abs( $max[$j] ) )
{
$result[$i][$j] =
fit( -abs( $max[$j] ), $result[$i][$j] );
}
printf "%*s", $max[$j], $result[$i][$j];
}
# reset colors
print $main::reset if $main::color;
# terminate current line
print "\n";
++$cursor;
# skip rest of output if reaching bottom of current terminal
my $diff = $rows - $reserve;
if ( $watch && $#result > $diff && $cursor > $diff ) {
print '(', plural( $#result - $i, 'additional workflow' );
print " omitted.)\n";
++$cursor;
last;
}
}
}
# print totals here
if ( !$show_subdag || $dcount{'_total'} > 1 ) {
if ($vertical) {
my $i = $#result;
# my $mk = (sort { $b <=> $a } map { length($dtitle{$_}{header}) } @dtitle)[0];
for ( my $j = 0 ; $j < @max ; ++$j ) {
print $main::bold if $main::color;
# printf "%*s: ", $mk, $dtitle{ $dtitle[$j] }{header};
printf "%s: ", $dtitle{ $dtitle[$j] }{header};
print $main::reset if $main::color;
printf "%s\n", $result[$i][$j];
++$cursor;
}
}
else {
# decide on a color for row and print data columns
print $main::bold if ( $show_subdag && $main::color );
my $i = $#result;
for ( my $j = 0 ; $j < @{ $result[$i] } ; ++$j ) {
print ' ' if $j;
if ( $j == $#max
&& length( $result[$i][$j] ) > abs( $max[$j] ) )
{
$result[$i][$j] =
fit( -abs( $max[$j] ), $result[$i][$j] );
}
printf "%*s", $max[$j], $result[$i][$j];
}
# reset colors
print $main::reset if $main::color;
# terminate current line
print "\n";
++$cursor;
}
}
# print summary
$cursor = dag_print_summary( $cursor, %dcount );
profile_log("final DAG printing") if defined $main::profile;
}
else {
# no valid rundir -- do nothing
}
# are we in 'watch' mode, or is this it?
if ( defined $watch ) {
sleep($watch);
}
else {
last;
}
}
exit 0;
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