pdb2pqr 2.1.1+dfsg-2 in ubuntu - bionic / universe

About

This package is 366.1 KB. It is available at http://archive.ubuntu.com/ubuntu/pool/universe/p/pdb2pqr/pdb2pqr_2.1.1+dfsg-2_amd64.deb .

View its full control file here: debian/control.

Description

Preparation of protein structures for electrostatics calculations

Relations

This package depends on: libc6 (>= 2.14), libgcc1 (>= 1:3.0), libpython2.7 (>= 2.7), libstdc++6 (>= 5.2), python:any (>= 2.6.6-7~), python2.7:any, python-numpy, python-networkx.

This package does not recommend any other package.

This package suggests: apbs.

This package does not conflict with any other package.

Package Contents

This package is indexed.

pdb2pqr 2.1.1+dfsg-2 is in ubuntu - bionic / universe. This package's architecture is: amd64.

File Mime Type Owner Mode Size
postinst text/x-shellscript N/A N/A 182 bytes
prerm text/x-shellscript N/A N/A 251 bytes
/usr/ root:root 0o755
/usr/bin/ root:root 0o755
/usr/bin/pdb2pqr root:root 0o777
/usr/bin/propka root:root 0o777
/usr/bin/psize root:root 0o777
/usr/lib/ root:root 0o755
/usr/lib/pdb2pqr/ root:root 0o755
/usr/lib/pdb2pqr/pdb2pka/ root:root 0o755
/usr/lib/pdb2pqr/pdb2pka/_pMC_mult.so application/x-sharedlib root:root 0o644 537.3 KB
/usr/lib/pdb2pqr/pdb2pka/substruct/ root:root 0o755
/usr/lib/pdb2pqr/pdb2pka/substruct/Algorithms.so application/x-sharedlib root:root 0o644 14.7 KB
/usr/share/ root:root 0o755
/usr/share/doc/ root:root 0o755
/usr/share/doc/pdb2pqr/ root:root 0o755
/usr/share/doc/pdb2pqr/AUTHORS text/plain root:root 0o644 31 bytes
/usr/share/doc/pdb2pqr/changelog.Debian.gz application/gzip root:root 0o644 1.7 KB
/usr/share/doc/pdb2pqr/copyright text/plain root:root 0o644 5.1 KB
/usr/share/doc/pdb2pqr/NEWS.gz application/gzip root:root 0o644 175 bytes
/usr/share/doc/pdb2pqr/README.Debian text/plain root:root 0o644 489 bytes
/usr/share/doc/pdb2pqr/README.md text/plain root:root 0o644 688 bytes
/usr/share/man/ root:root 0o755
/usr/share/man/man1/ root:root 0o755
/usr/share/man/man1/pdb2pqr.1.gz application/gzip root:root 0o644 2.0 KB
/usr/share/man/man1/propka.1.gz application/gzip root:root 0o644 1.0 KB
/usr/share/man/man1/psize.1.gz application/gzip root:root 0o644 1.2 KB
/usr/share/pdb2pqr/ root:root 0o755
/usr/share/pdb2pqr/dat/ root:root 0o755
/usr/share/pdb2pqr/dat/AA.xml text/xml root:root 0o644 59.7 KB
/usr/share/pdb2pqr/dat/AMBER.DAT text/plain root:root 0o644 61.5 KB
/usr/share/pdb2pqr/dat/AMBER.names text/xml root:root 0o644 2.3 KB
/usr/share/pdb2pqr/dat/CHARMM.DAT text/plain root:root 0o644 65.3 KB
/usr/share/pdb2pqr/dat/CHARMM.names text/xml root:root 0o644 7.0 KB
/usr/share/pdb2pqr/dat/HYDROGENS.xml text/xml root:root 0o644 4.5 KB
/usr/share/pdb2pqr/dat/NA.xml text/xml root:root 0o644 34.6 KB
/usr/share/pdb2pqr/dat/PARSE.DAT text/plain root:root 0o644 24.9 KB
/usr/share/pdb2pqr/dat/PARSE.names text/xml root:root 0o644 5.8 KB
/usr/share/pdb2pqr/dat/PATCHES.xml text/xml root:root 0o644 15.1 KB
/usr/share/pdb2pqr/dat/PEOEPB.DAT text/plain root:root 0o644 30.1 KB
/usr/share/pdb2pqr/dat/PEOEPB.names text/xml root:root 0o644 1.7 KB
/usr/share/pdb2pqr/dat/SWANSON.DAT text/plain root:root 0o644 34.6 KB
/usr/share/pdb2pqr/dat/SWANSON.names text/xml root:root 0o644 1.2 KB
/usr/share/pdb2pqr/dat/TOPOLOGY.xml text/xml root:root 0o644 63.8 KB
/usr/share/pdb2pqr/dat/TYL06.DAT text/plain root:root 0o644 97.5 KB
/usr/share/pdb2pqr/dat/TYL06.names text/xml root:root 0o644 2.0 KB
/usr/share/pdb2pqr/extensions/ root:root 0o755
/usr/share/pdb2pqr/extensions/chi.py text/plain root:root 0o644 2.0 KB
/usr/share/pdb2pqr/extensions/contact.py text/plain root:root 0o644 2.9 KB
/usr/share/pdb2pqr/extensions/hbond.py text/plain root:root 0o644 7.0 KB
/usr/share/pdb2pqr/extensions/__init__.py text/plain root:root 0o644 4.6 KB
/usr/share/pdb2pqr/extensions/newresinter.py text/plain root:root 0o644 13.2 KB
/usr/share/pdb2pqr/extensions/rama.py text/plain root:root 0o644 3.4 KB
/usr/share/pdb2pqr/extensions/README text/plain root:root 0o644 209 bytes
/usr/share/pdb2pqr/extensions/resinter.py text/plain root:root 0o644 12.2 KB
/usr/share/pdb2pqr/extensions/salt.py text/plain root:root 0o644 3.1 KB
/usr/share/pdb2pqr/extensions/summary.py text/plain root:root 0o644 944 bytes
/usr/share/pdb2pqr/extensions/template text/plain root:root 0o644 3.2 KB
/usr/share/pdb2pqr/main_cgi.py text/x-objective-c root:root 0o644 27.8 KB
/usr/share/pdb2pqr/main.py text/plain root:root 0o644 33.8 KB
/usr/share/pdb2pqr/pdb2pka/ root:root 0o755
/usr/share/pdb2pqr/pdb2pka/apbs.py text/plain root:root 0o644 14.8 KB
/usr/share/pdb2pqr/pdb2pka/charge_mon.py text/x-c++ root:root 0o644 3.4 KB
/usr/share/pdb2pqr/pdb2pka/example.py text/plain root:root 0o644 8.0 KB
/usr/share/pdb2pqr/pdb2pka/graph_cut/ root:root 0o755
/usr/share/pdb2pqr/pdb2pka/graph_cut/create_titration_output.py text/plain root:root 0o644 369 bytes
/usr/share/pdb2pqr/pdb2pka/graph_cut/graph.py text/x-c++ root:root 0o644 4.2 KB
/usr/share/pdb2pqr/pdb2pka/graph_cut/__init__.py application/x-empty root:root 0o644 0 bytes
/usr/share/pdb2pqr/pdb2pka/graph_cut/protein_complex.py text/x-c++ root:root 0o644 35.9 KB
/usr/share/pdb2pqr/pdb2pka/graph_cut/titration_curve.py text/x-python root:root 0o644 8.2 KB
/usr/share/pdb2pqr/pdb2pka/graph_cut/uncertainty.py text/x-python root:root 0o644 4.0 KB
/usr/share/pdb2pqr/pdb2pka/graph_cut/utils.py text/x-python root:root 0o644 4.0 KB
/usr/share/pdb2pqr/pdb2pka/__init__.py application/x-empty root:root 0o644 0 bytes
/usr/share/pdb2pqr/pdb2pka/inputgen_pKa.py text/x-python root:root 0o644 11.4 KB
/usr/share/pdb2pqr/pdb2pka/ligandclean/ root:root 0o755
/usr/share/pdb2pqr/pdb2pka/ligandclean/__init__.py text/plain root:root 0o644 28 bytes
/usr/share/pdb2pqr/pdb2pka/ligandclean/ligff.py text/x-c++ root:root 0o644 13.7 KB
/usr/share/pdb2pqr/pdb2pka/ligandclean/lookuptable.py text/plain root:root 0o644 1013 bytes
/usr/share/pdb2pqr/pdb2pka/ligandclean/peoe_PDB2PQR.py text/plain root:root 0o644 5.4 KB
/usr/share/pdb2pqr/pdb2pka/ligandclean/templates.py text/plain root:root 0o644 4.0 KB
/usr/share/pdb2pqr/pdb2pka/ligandclean/trial_templates.py text/plain root:root 0o644 4.6 KB
/usr/share/pdb2pqr/pdb2pka/ligand_topology.py text/x-c++ root:root 0o644 28.4 KB
/usr/share/pdb2pqr/pdb2pka/NEWligand_topology.py text/x-c++ root:root 0o644 28.4 KB
/usr/share/pdb2pqr/pdb2pka/pKa_base.py text/x-c++ root:root 0o644 4.9 KB
/usr/share/pdb2pqr/pdb2pka/pka_help.py text/x-python root:root 0o644 3.8 KB
/usr/share/pdb2pqr/pdb2pka/pKaIO_compat.py text/x-c++ root:root 0o644 33.8 KB
/usr/share/pdb2pqr/pdb2pka/pka_old.py text/x-python root:root 0o644 23.2 KB
/usr/share/pdb2pqr/pdb2pka/pka_routines.py text/x-objective-c root:root 0o644 106.6 KB
/usr/share/pdb2pqr/pdb2pka/pKa_utility_functions_compat.py text/plain root:root 0o644 5.6 KB
/usr/share/pdb2pqr/pdb2pka/pMC_mult.py text/x-c++ root:root 0o644 14.6 KB
/usr/share/pdb2pqr/pdb2pka/_pMC_mult.so root:root 0o777
/usr/share/pdb2pqr/pdb2pka/prepare_pKa_ligand.py text/x-python root:root 0o644 8.1 KB
/usr/share/pdb2pqr/pdb2pka/substruct/ root:root 0o755
/usr/share/pdb2pqr/pdb2pka/substruct/Algorithms.so root:root 0o777
/usr/share/pdb2pqr/pdb2pka/substruct/__init__.py text/plain root:root 0o644 8 bytes
/usr/share/pdb2pqr/pdb2pqr.py text/plain root:root 0o755 2.9 KB
/usr/share/pdb2pqr/pka.py text/x-python root:root 0o644 14.8 KB
/usr/share/pdb2pqr/propka30/ root:root 0o755
/usr/share/pdb2pqr/propka30/compare.py text/x-objective-c root:root 0o644 7.2 KB
/usr/share/pdb2pqr/propka30/experiment.py text/x-python root:root 0o644 12.7 KB
/usr/share/pdb2pqr/propka30/__init__.py text/plain root:root 0o644 2.3 KB
/usr/share/pdb2pqr/propka30/propka_det.py text/x-python root:root 0o644 3.6 KB
/usr/share/pdb2pqr/propka30/propka_gui.py text/x-python root:root 0o644 4.0 KB
/usr/share/pdb2pqr/propka30/propka_mut.py text/x-python root:root 0o644 4.1 KB
/usr/share/pdb2pqr/propka30/propka_pdb.py text/x-python root:root 0o644 3.0 KB
/usr/share/pdb2pqr/propka30/propka.py text/x-python root:root 0o755 3.0 KB
/usr/share/pdb2pqr/propka30/Source/ root:root 0o755
/usr/share/pdb2pqr/propka30/Source/bonds.py text/x-c++ root:root 0o644 20.9 KB
/usr/share/pdb2pqr/propka30/Source/calculator.py text/x-python root:root 0o644 19.3 KB
/usr/share/pdb2pqr/propka30/Source/chain.py text/x-c++ root:root 0o644 15.0 KB
/usr/share/pdb2pqr/propka30/Source/compare.py text/x-python root:root 0o644 12.5 KB
/usr/share/pdb2pqr/propka30/Source/corresponding_atoms.py text/x-python root:root 0o644 6.4 KB
/usr/share/pdb2pqr/propka30/Source/coupled_residues.py text/x-python root:root 0o644 16.4 KB
/usr/share/pdb2pqr/propka30/Source/debug.py text/x-python root:root 0o644 6.9 KB
/usr/share/pdb2pqr/propka30/Source/determinant.py text/x-c++ root:root 0o644 2.8 KB
/usr/share/pdb2pqr/propka30/Source/determinants.py text/x-objective-c root:root 0o644 14.0 KB
/usr/share/pdb2pqr/propka30/Source/__init__.py text/plain root:root 0o644 2.6 KB
/usr/share/pdb2pqr/propka30/Source/ions.list text/plain root:root 0o644 466 bytes
/usr/share/pdb2pqr/propka30/Source/iterative.py text/x-objective-c root:root 0o644 15.4 KB
/usr/share/pdb2pqr/propka30/Source/lib.py text/x-python root:root 0o644 26.7 KB
/usr/share/pdb2pqr/propka30/Source/ligand.py text/x-python root:root 0o644 17.7 KB
/usr/share/pdb2pqr/propka30/Source/mutate.py text/x-objective-c root:root 0o644 53.4 KB
/usr/share/pdb2pqr/propka30/Source/output.py text/plain root:root 0o644 18.5 KB
/usr/share/pdb2pqr/propka30/Source/parameters_new.py text/x-python root:root 0o644 16.7 KB
/usr/share/pdb2pqr/propka30/Source/parameters.py text/x-python root:root 0o644 56.1 KB
/usr/share/pdb2pqr/propka30/Source/parameters_std.py text/x-python root:root 0o644 16.3 KB
/usr/share/pdb2pqr/propka30/Source/pdb.py text/plain root:root 0o644 19.4 KB
/usr/share/pdb2pqr/propka30/Source/protein_bonds.dat text/plain root:root 0o644 3.9 KB
/usr/share/pdb2pqr/propka30/Source/protein.py text/x-objective-c root:root 0o644 35.7 KB
/usr/share/pdb2pqr/propka30/Source/protonate.py text/x-python root:root 0o644 19.6 KB
/usr/share/pdb2pqr/propka30/Source/protonator.py text/x-python root:root 0o644 26.6 KB
/usr/share/pdb2pqr/propka30/Source/residue.py text/x-c++ root:root 0o644 31.3 KB
/usr/share/pdb2pqr/propka30/Source/rotate.py text/x-python root:root 0o644 13.3 KB
/usr/share/pdb2pqr/propka30/Source/vector_algebra.py text/x-c++ root:root 0o644 12.2 KB
/usr/share/pdb2pqr/propka30/Source/version.py text/plain root:root 0o644 59.6 KB
/usr/share/pdb2pqr/src/ root:root 0o755
/usr/share/pdb2pqr/src/aa.py text/plain root:root 0o644 25.4 KB
/usr/share/pdb2pqr/src/aconf.py text/plain root:root 0o644 3.2 KB
/usr/share/pdb2pqr/src/aconf.py.in text/plain root:root 0o644 3.2 KB
/usr/share/pdb2pqr/src/definitions.py text/plain root:root 0o644 13.7 KB
/usr/share/pdb2pqr/src/errors.py text/plain root:root 0o644 3.5 KB
/usr/share/pdb2pqr/src/forcefield.py text/plain root:root 0o644 35.1 KB
/usr/share/pdb2pqr/src/hydrogens.py text/plain root:root 0o644 104.7 KB
/usr/share/pdb2pqr/src/__init__.py application/x-empty root:root 0o644 0 bytes
/usr/share/pdb2pqr/src/inputgen.py text/plain root:root 0o644 18.0 KB
/usr/share/pdb2pqr/src/na.py text/plain root:root 0o644 9.5 KB
/usr/share/pdb2pqr/src/pdb.py text/plain root:root 0o644 98.5 KB
/usr/share/pdb2pqr/src/protein.py text/plain root:root 0o644 13.3 KB
/usr/share/pdb2pqr/src/psize.py text/x-python root:root 0o755 17.8 KB
/usr/share/pdb2pqr/src/quatfit.py text/plain root:root 0o644 15.6 KB
/usr/share/pdb2pqr/src/routines.py text/plain root:root 0o644 69.4 KB
/usr/share/pdb2pqr/src/server.py text/plain root:root 0o644 18.6 KB
/usr/share/pdb2pqr/src/server.py.in text/plain root:root 0o644 18.5 KB
/usr/share/pdb2pqr/src/structures.py text/plain root:root 0o644 28.8 KB
/usr/share/pdb2pqr/src/topology.py text/plain root:root 0o644 14.9 KB
/usr/share/pdb2pqr/src/utilities.py text/plain root:root 0o644 16.8 KB
/usr/share/python/ root:root 0o755
/usr/share/python/runtime.d/ root:root 0o755
/usr/share/python/runtime.d/pdb2pqr.rtupdate text/x-shellscript root:root 0o755 136 bytes

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