/usr/share/arc/PBS.pm is in nordugrid-arc-arex 5.4.2-1build1.
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use strict;
our @ISA = ('Exporter');
# Module implements these subroutines for the LRMS interface
our @EXPORT_OK = ('cluster_info',
'queue_info',
'jobs_info',
'users_info',
'nodes_info');
use LogUtils ( 'start_logging', 'error', 'warning', 'debug' );
##########################################
# Saved private variables
##########################################
our(%lrms_queue);
my (%user_jobs_running, %user_jobs_queued);
# the queue passed in the latest call to queue_info, jobs_info or users_info
my $currentqueue = undef;
# cache info about nodes
my $pbsnodes;
# PBS type and flavour
my $lrms_type = undef;
my $lrms_version = undef;
# Resets queue-specific global variables if
# the queue has changed since the last call
sub init_globals($) {
my $qname = shift;
if (not defined $currentqueue or $currentqueue ne $qname) {
$currentqueue = $qname;
%lrms_queue = ();
%user_jobs_running = ();
%user_jobs_queued = ();
}
}
# get PBS type and version
sub get_pbs_version ($) {
return unless not defined $lrms_type;
# path to LRMS commands
my ($config) = shift;
my ($path) = $$config{pbs_bin_path};
# determine the flavour and version of PBS
my $qmgr_string=`$path/qmgr -c "list server"`;
if ( $? != 0 ) {
warning("Can't run qmgr");
}
if ($qmgr_string =~ /pbs_version = \b(\D+)_(\d\S+)\b/) {
$lrms_type = $1;
$lrms_version = $2;
} else {
$qmgr_string =~ /pbs_version = \b(\d\S+)\b/;
$lrms_type = "torque";
$lrms_version = $1;
}
}
##########################################
# Private subs
##########################################
sub read_pbsnodes ($) {
return %$pbsnodes if $pbsnodes;
#processing the pbsnodes output by using a hash of hashes
# %hoh_pbsnodes (referrenced by $hashref)
my ( $path ) = shift;
my ( %hoh_pbsnodes);
my ($nodeid,$node_var,$node_value);
unless (open PBSNODESOUT, "$path/pbsnodes -a 2>/dev/null |") {
error("error in executing pbsnodes");
}
while (my $line= <PBSNODESOUT>) {
if ($line =~ /^$/) {next};
if ($line =~ /^([\w\-]+)/) {
$nodeid= $1 ;
next;
}
if ($line =~ / = /) {
($node_var,$node_value) = split (/ = /, $line);
$node_var =~ s/\s+//g;
chop $node_value;
}
$hoh_pbsnodes{$nodeid}{$node_var} = $node_value;
}
close PBSNODESOUT;
$pbsnodes = \%hoh_pbsnodes;
return %hoh_pbsnodes;
}
# Splits up the value of the exec_host string.
# Returns a list of node names, one for each used cpu.
# Should handle node specs of the form:
# (1) node1/0+node0/1+node0/2+node2/1 (torque)
# (2) hosta/J1+hostb/J2*P (according to the PBSPro manual)
# (3) node1+node1+node2+node2
# (4) altix:ssinodes=2:mem=7974912kb:ncpus=4 (found on the web)
# (5) grid-wn0749.desy.de/2 Resource_List.neednodes=1:ppn=8 (reported by Andreas Gellrich from Desy HH)
sub split_hostlist {
my ($exec_host_string) = @_;
my @nodes;
my $err;
for my $nodespec (split '\+', $exec_host_string) {
if ($nodespec =~ m{^([^/:]+)/\d+(?:\*(\d+))?$}) { # cases (1) and (2)
my ($nodename, $multiplier) = ($1, $2 || 1);
push @nodes, $nodename for 1..$multiplier;
} elsif ($nodespec =~ m{^([^/:]+)(?::(.+))?$}) { # cases (3) and (4)
my ($nodename, $resc) = ($1, $2 || '');
my $multiplier = get_ncpus($resc);
push @nodes, $nodename for 1..$multiplier;
} elsif ($nodespec =~ m{^([^/]+)/\d+ Resource_List\.neednodes=(\d+):ppn=(\d+)?$} ){ # case (5)
my $nodename = $1;
my $numnodes = $2 || 1;
my $ppn = $3 || 1;
my $multiplier = $ppn; #Not sure if this is the correct multiplier. Is there an entry for each node? or should multiplier be numnodes*ppn?
push @nodes, $nodename for 1..$multiplier;
} else {
$err = $nodespec;
}
}
warning("failed counting nodes in expression: $exec_host_string") if $err;
return @nodes;
}
# Deduces the number of requested cpus from the values of these job properties:
# Resource_List.select (PBSPro 8+)
# Resource_List.nodes
# Resource_List.ncpus
sub set_cpucount {
my ($job) = (@_);
my $select = $job->{"Resource_List.select"};
my $nodes = $job->{"Resource_List.nodes"};
my $ncpus = $job->{"Resource_List.ncpus"};
$job->{cpus} = count_usedcpus($select, $nodes, $ncpus);
delete $job->{"Resource_List.select"};
delete $job->{"Resource_List.nodes"};
delete $job->{"Resource_List.ncpus"};
}
# Convert time from [DD:[HH:[MM:]]]SS to minutes
sub count_time {
my $pbs_time = shift;
# split and reverse PBS time to start from seconds, then drop seconds
my @t = reverse split /:/, $pbs_time;
my $minutes = 0;
if ( ! defined $t[1] ) {
# PBS seconds only case
$minutes = int( $t[0] / 60 );
} else {
# drop seconds
shift @t;
$minutes = $t[0];
$minutes += $t[1]*60 if defined $t[1];
$minutes += $t[2]*60*24 if defined $t[2];
}
return $minutes;
}
sub count_usedcpus {
my ($select, $nodes, $ncpus) = @_;
return sum_over_chunks(\&cpus_in_select_chunk, $select) if defined $select;
return $ncpus || 1 if not defined $nodes or $nodes eq '1';
return sum_over_chunks(\&cpus_in_nodes_chunk, $nodes) if defined $nodes;
return 1;
}
sub sum_over_chunks {
my ($count_func, $string) = @_;
my $totalcpus = 0;
for my $chunk (split '\+', $string) {
my $cpus = &$count_func($chunk);
$totalcpus += $cpus;
}
return $totalcpus;
}
# counts cpus in chunk definitions of the forms found in Resource_List.nodes property
# 4
# 2:ppn=2
# host1
# host1:prop1:prop2
# prop1:prop2:ppn=4
sub cpus_in_nodes_chunk {
my ($chunk) = @_;
my ($ncpus,$dummy) = split ':', $chunk;
$ncpus = 1 if $ncpus =~ m/\D/; # chunk count ommited
return $ncpus * get_ppn($chunk);
}
# counts cpus in chunk definitions of the forms found in Resource_List.select (PBSPro 8+):
# 4
# 2:ncpus=1
# 1:ncpus=4:mpiprocs=4:host=hostA
sub cpus_in_select_chunk {
my ($chunk) = @_;
return $1 if $chunk =~ m/^(\d+)$/;
if ($chunk =~ m{^(\d+):(.*)$}) {
my ($cpus, $resc) = ($1, $2);
return $cpus * get_ncpus($resc);
}
return 0; # not a valid chunk
}
# extracts the value of ppn from a string like blah:ppn=N:blah
sub get_ppn {
my ($resc) = @_;
for my $res (split ':', $resc) {
return $1 if $res =~ m /^ppn=(\d+)$/;
}
return 1;
}
# extracts the value of ncpus from a string like blah:ncpus=N:blah
sub get_ncpus {
my ($resc) = @_;
for my $res (split ':', $resc) {
return $1 if $res =~ m /^ncpus=(\d+)$/;
}
return 1;
}
sub get_variable($$){
my $match = shift;
my $string = shift;
$string =~ m/(\w\s)*?$match\s?[=:] ((\w|\s|\/|,|.|:|;|\[|\]|\(|\)|-)*?)($| \w+=.*)/ ;
my $var = $2;
return $var;
}
sub read_qstat_f ($) {
my $path=shift;
unless ( open QSTAT_F, "$path/qstat -f 2>/dev/null |") {
error("Error in executing qstat");
}
my $jobid="";
my %qstat_jobs;
my $rs=$/;
$/="";
while (<QSTAT_F>) {
s/\n\t//g;
foreach(split(/\n/)) {
my $string = $_;
if ($string =~ /Job Id/) {
$jobid= get_variable("Job Id", $string);
}
if (!$jobid) {
next;
}
if ($string =~ /Resource_List.nodes/){
$qstat_jobs{$jobid}{"Resource_List.nodes"}= get_variable("Resource_List.nodes",$string);
}
if ($string =~ /exec_host/){
$qstat_jobs{$jobid}{"exec_host"}= get_variable("exec_host",$string);
}
if ($string =~ /job_state/){
$qstat_jobs{$jobid}{"job_state"}= get_variable("job_state",$string);
}
if ($string =~ /Resource_List.select/){
$qstat_jobs{$jobid}{"Resource_List.select"}= get_variable("Resource_List.select",$string);
}
if ($string =~ /Resource_List.ncpus/){
$qstat_jobs{$jobid}{"Resource_List.ncpus"}= get_variable("Resource_List.ncpus",$string);
}
}
};
$/=$rs;
close QSTAT_F;
return %qstat_jobs;
}
# gets information about each destination queue behind a
# routing queue and copies it into the routing queue data structure.
# at the moment it only copies data from the first queue
#
# input: $queue name of the current queue
# $path to pbs binaries
# $singledqueue that contains the only queue behind the routing one
# %qstat{} for the current queue
# output: the %dqueue hash containing info about destination queues
# in %lrms_queue fashion
sub process_dqueues($$%){
my $qname = shift;
my $path = shift;
my (%qstat) = %{$_[0]};
my $singledqueue;
my %dqueues;
# build DQs data structure
my @dqnames;
if (defined $qstat{'route_destinations'}) {
@dqnames=split(",",$qstat{'route_destinations'});
@dqueues{@dqnames}=undef;
foreach my $dqname ( keys %dqueues ) {
debug("Processing queues behind routing queue. Current queue is $dqname");
my (%dqstat);
unless (open QSTATOUTPUT, "$path/qstat -Q -f $dqname 2>/dev/null |") {
error("Error in executing qstat: $path/qstat -Q -f $dqname");
}
while (my $line= <QSTATOUTPUT>) {
if ($line =~ m/ = /) {
chomp($line);
my ($dqstat_var,$dqstat_value) = split("=", $line);
$dqstat_var =~ s/\s+//g;
$dqstat_value =~ s/\s+//g;
$dqstat{$dqstat_var}=$dqstat_value;
}
}
close QSTATOUTPUT;
$dqueues{$dqname}=\%dqstat;
}
# debug($dqueues{'verylong'}{'resources_max.walltime'});
}
else {
error("No route_destinations for routing queue $qname. Please check LRMS configuration.");
}
# take the first destination queue behind the RQ, copy its data to the RQ
# this happens only if the RQ has no data defined on PBS
# this should solve bug #859
$singledqueue=shift(@dqnames);
debug('Just one queue behind routing queue is currently supported: '.$singledqueue);
my @attributes=(
'max_running',
'max_user_run',
'max_queuable',
'resources_max.cput',
'resources_min.cput',
'resources_default.cput',
'resources_max.walltime',
'resources_min.walltime',
'resources_default.walltime',
'state_count'
);
foreach my $rkey (@attributes) {
# line to check queues under routing queue values. Undefined values generate crap in logs,
# so is commented out.
# debug('with key '.$rkey.' qstat returns '.$qstat{$rkey}.' and the dest. queue has '.$dqueues{$singledqueue}{$rkey} );
if (!defined $qstat{$rkey}) {${$_[0]}{$rkey}=$dqueues{$singledqueue}{$rkey};};
}
return %dqueues;
}
############################################
# Public subs
#############################################
sub cluster_info ($) {
# Path to LRMS commands
my ($config) = shift;
my ($path) = $$config{pbs_bin_path};
# Return data structure %lrms_cluster{$keyword}
#
# All values should be defined, empty values "" are ok if field
# does not apply to particular LRMS.
my (%lrms_cluster);
# flavour and version of PBS
get_pbs_version($config);
$lrms_cluster{lrms_type} = $lrms_type;
$lrms_cluster{lrms_glue_type}=lc($lrms_type);
$lrms_cluster{lrms_version} = $lrms_version;
if ( $lrms_type eq "torque" and
exists $$config{scheduling_policy} and
lc($$config{scheduling_policy}) eq "maui") {
$lrms_cluster{lrms_glue_type}="torquemaui";
}
# PBS treats cputime limit for parallel/multi-cpu jobs as job-total
$lrms_cluster{has_total_cputime_limit} = 1;
# processing the pbsnodes output by using a hash of hashes %hoh_pbsnodes
my ( %hoh_pbsnodes ) = read_pbsnodes( $path );
error("The given flavour of PBS $lrms_cluster{lrms_type} is not supported")
unless grep {$_ eq lc($lrms_cluster{lrms_type})}
qw(openpbs spbs torque pbspro);
$lrms_cluster{totalcpus} = 0;
my ($number_of_running_jobs) = 0;
$lrms_cluster{cpudistribution} = "";
my (@cpudist) = 0;
my %available_nodes = ();
# loop over all available nodes
foreach my $node (keys %hoh_pbsnodes) {
# skip nodes that does not conform dedicated_node_string filter
if ( exists $$config{dedicated_node_string} && $$config{dedicated_node_string} ne "") {
next unless ( $hoh_pbsnodes{$node}{"properties"} =~
m/^([^,]+,)*$$config{dedicated_node_string}(,[^,]+)*$/);
}
# add node to available_nodes hash
$available_nodes{$node} = 1;
# get node state and number of CPUs
my ($nodestate) = $hoh_pbsnodes{$node}{"state"};
my $nodecpus;
if ($hoh_pbsnodes{$node}{'np'}) {
$nodecpus = $hoh_pbsnodes{$node}{'np'};
} elsif ($hoh_pbsnodes{$node}{'resources_available.ncpus'}) {
$nodecpus = $hoh_pbsnodes{$node}{'resources_available.ncpus'};
}
next if ($nodestate=~/down/ or $nodestate=~/offline/);
if ($nodestate=~/(?:,|^)busy/) {
$lrms_cluster{totalcpus} += $nodecpus;
$cpudist[$nodecpus] +=1;
$number_of_running_jobs += $nodecpus;
next;
}
$lrms_cluster{totalcpus} += $nodecpus;
$cpudist[$nodecpus] += 1;
if ($hoh_pbsnodes{$node}{"jobs"}){
$number_of_running_jobs++;
my ( @comma ) = ($hoh_pbsnodes{$node}{"jobs"}=~ /,/g);
$number_of_running_jobs += @comma;
}
}
# form LRMS cpudistribution string
for (my $i=0; $i<=$#cpudist; $i++) {
next unless ($cpudist[$i]);
$lrms_cluster{cpudistribution} .= " ".$i."cpu:".$cpudist[$i];
}
# read the qstat -n information about all jobs
# queued cpus, total number of cpus in all jobs
$lrms_cluster{usedcpus} = 0;
$lrms_cluster{queuedcpus} = 0;
$lrms_cluster{queuedjobs} = 0;
$lrms_cluster{runningjobs} = 0;
my %qstat_jobs = read_qstat_f($path);
for my $key (keys %qstat_jobs) {
# usercpus (running jobs)
if ( $qstat_jobs{$key}{job_state} =~ /R/) {
$lrms_cluster{runningjobs}++;
my @nodes = split_hostlist($qstat_jobs{$key}{exec_host});
# filter using dedicated_node_string
foreach my $node ( @nodes ) {
next unless defined $available_nodes{$node};
$lrms_cluster{usedcpus}++;
}
}
#
if ( $qstat_jobs{$key}{job_state} =~ /(W|T|Q)/) {
$lrms_cluster{queuedjobs}++;
$lrms_cluster{queuedcpus}+=count_usedcpus($qstat_jobs{$key}{"Resource_List.select"},
$qstat_jobs{$key}{"Resource_List.nodes"},
$qstat_jobs{$key}{"Resource_List.ncpus"});
}
}
# Names of all LRMS queues
@{$lrms_cluster{queue}} = ();
unless (open QSTATOUTPUT, "$path/qstat -Q 2>/dev/null |") {
error("Error in executing qstat");
}
while (my $line= <QSTATOUTPUT>) {
if ( $. == 1 or $. == 2 ) {next} # Skip header lines
my (@a) = split " ", $line;
push @{$lrms_cluster{queue}}, $a[0];
}
close QSTATOUTPUT;
return %lrms_cluster;
}
sub queue_info ($$) {
# Path to LRMS commands
my ($config) = shift;
my ($path) = $$config{pbs_bin_path};
# Name of the queue to query
my ($qname) = shift;
init_globals($qname);
# The return data structure is %lrms_queue.
# In this template it is defined as persistent module data structure,
# because it is later used by jobs_info(), and we wish to avoid
# re-construction of it. If it were not needed later, it would be defined
# only in the scope of this subroutine, as %lrms_cluster previously.
# Return data structure %lrms_queue{$keyword}
#
# All values should be defined, empty values "" are ok if field
# does not apply to particular LRMS.
# read the queue information for the queue entry from the qstat
my (%qstat);
unless (open QSTATOUTPUT, "$path/qstat -Q -f $qname 2>/dev/null |") {
error("Error in executing qstat: $path/qstat -Q -f $qname");
}
while (my $line= <QSTATOUTPUT>) {
if ($line =~ m/ = /) {
chomp($line);
my ($qstat_var,$qstat_value) = split("=", $line);
$qstat_var =~ s/\s+//g;
$qstat_value =~ s/\s+//g;
$qstat{$qstat_var}=$qstat_value;
}
}
close QSTATOUTPUT;
# this script contain a solution for a single queue behind the
# routing one, the routing queue will inherit some of its
# attributes.
# this hash contains qstat records for queues - in this case just one
my %dqueues;
# this variable contains the single destination queue
my $singledqueue;
if ($qstat{queue_type} =~ /Route/) {
%dqueues = process_dqueues($qname,$path,\%qstat);
$singledqueue = ( keys %dqueues )[0];
} else {
undef %dqueues;
undef $singledqueue;
}
# publish queue limits parameters
# general limits (publish as is)
my (%keywords);
my (%keywords_all) = ( 'max_running' => 'maxrunning',
'max_user_run' => 'maxuserrun',
'max_queuable' => 'maxqueuable' );
# TODO: MinSlots, etc.
my (%keywords_torque) = ( 'resources_max.procct' => 'MaxSlotsPerJob' );
my (%keywords_pbspro) = ( 'resources_max.ncpus' => 'MaxSlotsPerJob' );
get_pbs_version($config);
if ( $lrms_type eq lc "torque" ) {
%keywords = (%keywords_all, %keywords_torque);
} elsif ( $lrms_type eq lc "pbspro" ) {
%keywords = (%keywords_all, %keywords_pbspro);
} else {
%keywords = %keywords_all;
}
foreach my $k (keys %keywords) {
if (defined $qstat{$k} ) {
$lrms_queue{$keywords{$k}} = $qstat{$k};
} else {
$lrms_queue{$keywords{$k}} = "";
}
}
# queue time limits (convert to minutes)
%keywords = ( 'resources_max.cput' => 'maxcputime',
'resources_min.cput' => 'mincputime',
'resources_default.cput' => 'defaultcput',
'resources_max.walltime' => 'maxwalltime',
'resources_min.walltime' => 'minwalltime',
'resources_default.walltime' => 'defaultwallt' );
foreach my $k (keys %keywords) {
if ( defined $qstat{$k} ) {
$lrms_queue{$keywords{$k}} = (&count_time($qstat{$k})+($k eq 'resources_min.cput'?1:0));
} else {
$lrms_queue{$keywords{$k}} = "";
}
}
# determine the queue status from the LRMS
# Used to be set to 'active' if the queue can accept jobs
# Now lists the number of available processors, "0" if no free
# cpus. Negative number signals some error state of PBS
# (reserved for future use).
# processing the pbsnodes output by using a hash of hashes %hoh_pbsnodes
my ( %hoh_pbsnodes ) = read_pbsnodes( $path );
$lrms_queue{status} = -1;
$lrms_queue{running} = 0;
$lrms_queue{queued} = 0;
$lrms_queue{totalcpus} = 0;
if ( ($qstat{"enabled"} =~ /True/) and ($qstat{"started"} =~ /True/)) {
unless (open QSTATOUTPUT, "$path/qstat -Q -f $qname 2>/dev/null |") {
error("Error in executing qstat: $path/qstat -Q -f $qname");
}
my %qstat;
while (my $line= <QSTATOUTPUT>) {
if ($line =~ m/ = /) {
chomp($line);
my ($qstat_var,$qstat_value) = split("=", $line);
$qstat_var =~ s/\s+//g;
$qstat_value =~ s/\s+//g;
$qstat{$qstat_var}=$qstat_value;
}
}
close QSTATOUTPUT;
# refresh routing queue records, in case something changed on the
# destination queues
if ($qstat{queue_type} =~ /Route/) {
debug("CPUs calculation pass. Queues are scanned a second time. Current queue is: $qstat{queue_type}");
%dqueues = process_dqueues($qname,$path,\%qstat);
# this variable contains the single destination queue
$singledqueue = ( keys %dqueues )[0];
} else {
undef %dqueues;
undef $singledqueue;
}
# qstat does not return number of cpus, use pbsnodes instead.
my ($torque_freecpus,$torque_totalcpus)=(0,0);
foreach my $node (keys %hoh_pbsnodes){
# If pbsnodes have properties assigned to them
# check if queuename or dedicated_node_string matches.
# $singledqueue check has been added for routing queue support,
# also the destination queue is checked to calculate totalcpus
# also adds correct behaviour for queue_node_string
if (
( ! defined $hoh_pbsnodes{$node}{'properties'}
) || (
(
defined $qname &&
$hoh_pbsnodes{$node}{'properties'} =~ m/^([^,]+,)*$qname(,[^,]+)*$/
) || (
defined $$config{dedicated_node_string} &&
$hoh_pbsnodes{$node}{'properties'} =~ m/^([^,]+,)*$$config{dedicated_node_string}(,[^,]+)*$/
) || (
defined $$config{queue_node_string} &&
$hoh_pbsnodes{$node}{'properties'} =~ m/^([^,]+,)*$$config{queue_node_string}(,[^,]+)*$/
) || (
defined $singledqueue &&
$hoh_pbsnodes{$node}{'properties'} =~ m/^([^,]+,)*$singledqueue(,[^,]+)*$/
)
)
) {
my $cpus;
next if $hoh_pbsnodes{$node}{'state'} =~ m/offline/;
next if $hoh_pbsnodes{$node}{'state'} =~ m/down/;
if ($hoh_pbsnodes{$node}{'np'}) {
$cpus = $hoh_pbsnodes{$node}{'np'};
} elsif ($hoh_pbsnodes{$node}{'resources_available.ncpus'}) {
$cpus = $hoh_pbsnodes{$node}{'resources_available.ncpus'};
}
$torque_totalcpus+=$cpus;
if ($hoh_pbsnodes{$node}{'state'} =~ m/free/){
$torque_freecpus+=$cpus;
}
}
}
$lrms_queue{totalcpus} = $torque_totalcpus;
debug("Totalcpus for all queues are: $lrms_queue{totalcpus}");
if(defined $$config{totalcpus}){
if ($lrms_queue{totalcpus} eq "" or $$config{totalcpus} < $lrms_queue{totalcpus}) {
$lrms_queue{totalcpus}=$$config{totalcpus};
}
}
$lrms_queue{status} = $torque_freecpus;
$lrms_queue{status}=0 if $lrms_queue{status} < 0;
if ( $qstat{state_count} =~ m/.*Running:([0-9]*).*/ ){
$lrms_queue{running}=$1;
} else {
$lrms_queue{running}=0;
}
# calculate running in case of a routing queue
if ( $qstat{queue_type} =~ /Route/ ) {
debug($dqueues{$singledqueue}{state_count});
if ( $dqueues{$singledqueue}{state_count} =~ m/.*Running:([0-9]*).*/ ) {
$lrms_queue{running}=$1;
}
}
# the above gets the number of nodes not the number of cores in use. If multi core jobs are running, "running" will be underestimated.
# Instead use totalcpus - freecpus (This might overrepresent running. because pbsnodes count whole nodes in use.)
# CUS (2015-02-09)
my $runningcores = $torque_totalcpus - $torque_freecpus ;
$runningcores = 0 if $runningcores < 0;
$lrms_queue{running} = $runningcores if $runningcores > $lrms_queue{running};
if ($lrms_queue{totalcpus} eq 0) {
warning("Can't determine number of cpus for queue $qname");
}
if ( $qstat{state_count} =~ m/.*Queued:([0-9]*).*/ ){
$lrms_queue{queued}=$1;
} else {
$lrms_queue{queued}=0;
}
# fallback for defult values that are required for normal operation
$lrms_queue{MaxSlotsPerJob} = $lrms_queue{totalcpus} if $lrms_queue{MaxSlotsPerJob} eq "";
# calculate queued in case of a routing queue
# queued jobs is the sum of jobs queued in the routing queue
# plus jobs in the destination queue
if ( $qstat{queue_type} =~ /Route/ ) {
debug($dqueues{$singledqueue}{state_count});
if ( $dqueues{$singledqueue}{state_count} =~ m/.*Queued:([0-9]*).*/ ) {
$lrms_queue{queued}=$lrms_queue{queued}+$1;
}
}
}
return %lrms_queue;
}
sub jobs_info ($$@) {
# Path to LRMS commands
my ($config) = shift;
my ($path) = $$config{pbs_bin_path};
# Name of the queue to query
my ($qname) = shift;
init_globals($qname);
# LRMS job IDs from Grid Manager (jobs with "INLRMS" GM status)
my ($jids) = shift;
# Return data structure %lrms_jobs{$lrms_local_job_id}{$keyword}
#
# All values should be defined, empty values "" are ok if field
# does not apply to particular LRMS.
my (%lrms_jobs);
# Fill %lrms_jobs here (da implementation)
# rank is treated separately as it does not have an entry in
# qstat output, comment because it is an array, and mem
# because "kB" needs to be stripped from the value
my (%skeywords) = ('job_state' => 'status');
my (%tkeywords) = ( 'resources_used.walltime' => 'walltime',
'resources_used.cput' => 'cputime',
'Resource_List.walltime' => 'reqwalltime',
'Resource_List.cputime' => 'reqcputime');
my (%nkeywords) = ( 'Resource_List.select' => 1,
'Resource_List.nodes' => 1,
'Resource_List.ncpus' => 1);
my ($alljids) = join ' ', @{$jids};
my ($rank) = 0;
my %job_owner;
# better rank for maui
my %showqrank;
if (exists $$config{scheduling_policy} and
lc($$config{scheduling_policy}) eq "maui") {
my $showq = (defined $$config{maui_bin_path}) ? $$config{maui_bin_path}."/showq" : "showq";
unless (open SHOWQOUTPUT, " $showq |"){
error("error in executing $showq ");
}
my $idle=-1;
while(my $line=<SHOWQOUTPUT>) {
if($line=~/^IDLE.+/) {
$idle=0;
$line=<SHOWQOUTPUT>;$line=<SHOWQOUTPUT>;
}
next if $idle == -1;
if ($line=~/^(\d+).+/) {
$idle++;
$showqrank{$1}=$idle;
}
}
close SHOWQOUTPUT;
}
my $handle_attr = sub {
my ($jid, $k, $v) = @_;
if ( defined $skeywords{$k} ) {
$lrms_jobs{$jid}{$skeywords{$k}} = $v;
if($k eq "job_state") {
if( $v eq "U" ) {
$lrms_jobs{$jid}{status} = "S";
} elsif ( $v eq "C" ) {
$lrms_jobs{$jid}{status} = ""; # No status means job has completed
} elsif ( $v ne "R" and $v ne "Q" and $v ne "S" and $v ne "E" ) {
$lrms_jobs{$jid}{status} = "O";
}
}
} elsif ( defined $tkeywords{$k} ) {
$lrms_jobs{$jid}{$tkeywords{$k}} = &count_time($v);
} elsif ( defined $nkeywords{$k} ) {
$lrms_jobs{$jid}{$k} = $v;
} elsif ( $k eq 'exec_host' ) {
my @nodes = split_hostlist($v);
$lrms_jobs{$jid}{nodes} = \@nodes;
#$lrms_jobs{$jid}{cpus} = scalar @nodes;
} elsif ( $k eq 'comment' ) {
$lrms_jobs{$jid}{comment} = []
unless $lrms_jobs{$jid}{comment};
push @{$lrms_jobs{$jid}{comment}}, "LRMS: $v";
} elsif ($k eq 'resources_used.vmem') {
$v =~ s/(\d+).*/$1/;
$lrms_jobs{$jid}{mem} = $v;
}
if ( $k eq 'Job_Owner' ) {
$v =~ /(\S+)@/;
$job_owner{$jid} = $1;
}
if ( $k eq 'job_state' ) {
if ($v eq 'R') {
$lrms_jobs{$jid}{rank} = "";
} elsif ($v eq 'C') {
$lrms_jobs{$jid}{rank} = "";
} else {
$rank++;
$lrms_jobs{$jid}{rank} = $rank;
$jid=~/^(\d+).+/;
if (defined $showqrank{$1}) {
$lrms_jobs{$jid}{rank} = $showqrank{$1};
}
}
if ($v eq 'R' or 'E'){
++$user_jobs_running{$job_owner{$jid}};
}
if ($v eq 'Q'){
++$user_jobs_queued{$job_owner{$jid}};
}
}
};
unless (open QSTATOUTPUT, "$path/qstat -f 2>/dev/null |") {
error("Error in executing qstat: $path/qstat -f ");
}
my ($jid, $k, $v) = ();
while (my $line = <QSTATOUTPUT>) {
if ($line =~ /^Job Id:\s+(\d+.*)$/) {
my $pbsjid = $1;
&$handle_attr($jid, $k, $v) if $k and $jid;
set_cpucount($lrms_jobs{$jid}) if $jid;
($jid, $k, $v) = ();
foreach my $j (@$jids) {
if ( $pbsjid =~ /^$j$/ ) {
$jid = $j;
last;
}
}
next;
}
next unless defined $jid;
# a line starting with a tab is a continuation line
if ( $line =~ m/^\t(.+)$/ ) {
$v .= $1;
next;
}
if ( $line =~ m/^\s*(\S+) = (.*)$/ ) {
my ($newk, $newv) = ($1, $2);
&$handle_attr($jid, $k, $v) if $k and $jid;
($k, $v) = ($newk, $newv);
}
}
&$handle_attr($jid, $k, $v) if $k and $jid;
set_cpucount($lrms_jobs{$jid}) if $jid;
close QSTATOUTPUT;
my (@scalarkeywords) = ('status', 'rank', 'mem', 'walltime', 'cputime',
'reqwalltime', 'reqcputime');
foreach $jid ( @$jids ) {
foreach my $k ( @scalarkeywords ) {
if ( ! defined $lrms_jobs{$jid}{$k} ) {
$lrms_jobs{$jid}{$k} = "";
}
}
$lrms_jobs{$jid}{comment} = [] unless $lrms_jobs{$jid}{comment};
$lrms_jobs{$jid}{nodes} = [] unless $lrms_jobs{$jid}{nodes};
}
return %lrms_jobs;
}
sub users_info($$@) {
# Path to LRMS commands
my ($config) = shift;
my ($path) = $$config{pbs_bin_path};
# Name of the queue to query
my ($qname) = shift;
init_globals($qname);
# Unix user names mapped to grid users
my ($accts) = shift;
# Return data structure %lrms_users{$unix_local_username}{$keyword}
#
# All values should be defined, empty values "" are ok if field
# does not apply to particular LRMS.
my (%lrms_users);
# Check that users have access to the queue
unless (open QSTATOUTPUT, "$path/qstat -f -Q $qname 2>/dev/null |") {
error("Error in executing qstat: $path/qstat -f -Q $qname");
}
my $acl_user_enable = 0;
my @acl_users;
my $more_acls = 0;
# added for routing queue support
my @dqueues;
my $singledqueue;
my $isrouting;
while (my $line= <QSTATOUTPUT>) {
chomp $line;
# is this a continuation of the acl line?
if ($more_acls) {
$line =~ s/^\s*//; # strip leading spaces
push @acl_users, split ',', $line;
$more_acls = 0 unless $line =~ /,\s*$/;
next;
}
if ( $line =~ /\s*acl_user_enable/ ) {
my ( $k ,$v ) = split ' = ', $line;
unless ( $v eq 'False' ) {
$acl_user_enable = 1;
}
}
if ( $line =~ /\s*acl_users/ ) {
my ( $k ,$v ) = split ' = ', $line;
unless ( $v eq 'False' ) {
# This condition is kept here in case the reason
# for it being there in the first place was that some
# version or flavour of PBS really has False as an alternative
# to usernames to indicate the absence of user access control
# A Corrallary: Dont name your users 'False' ...
push @acl_users, split ',', $v;
$more_acls = 1 if $v =~ /,\s*$/;
}
}
# added to support routing queues
if (!$acl_user_enable){
if ($line =~ /\s*route_destinations\s=\s(.*)$/) {
@dqueues=split (',',$1);
$singledqueue=shift(@dqueues);
warning('Routing queue did not have acl information. Local user acl taken from destination queue: '.$singledqueue);
$isrouting = 1;
}
}
}
close QSTATOUTPUT;
# if the acl_user_enable is not defined in the RQ,
# it could be defined in the destination queues.
# we proceed same way as before but on the first
# destination queue to propagate the info to the routing one
if ($isrouting){
debug("Getting acl from destination queue $singledqueue");
# Check that users have access to the queue
unless (open QSTATOUTPUT, "$path/qstat -f -Q $singledqueue 2>/dev/null |") {
error("Error in executing qstat on destination queue: $path/qstat -f -Q $singledqueue");
}
$acl_user_enable = 0;
$more_acls = 0;
while (my $line= <QSTATOUTPUT>) {
chomp $line;
# is this a continuation of the acl line?
if ($more_acls) {
$line =~ s/^\s*//; # strip leading spaces
push @acl_users, split ',', $line;
$more_acls = 0 unless $line =~ /,\s*$/;
next;
}
if ( $line =~ /\s*acl_user_enable/ ) {
my ( $k ,$v ) = split ' = ', $line;
unless ( $v eq 'False' ) {
$acl_user_enable = 1;
}
}
if ( $line =~ /\s*acl_users/ ) {
my ( $k ,$v ) = split ' = ', $line;
unless ( $v eq 'False' ) {
# This condition is kept here in case the reason
# for it being there in the first place was that some
# version or flavour of PBS really has False as an alternative
# to usernames to indicate the absence of user access control
# A Corrallary: Dont name your users 'False' ...
push @acl_users, split ',', $v;
$more_acls = 1 if $v =~ /,\s*$/;
}
}
}
close QSTATOUTPUT;
debug(@acl_users);
}
# acl_users is only in effect when acl_user_enable is true
if ($acl_user_enable) {
foreach my $a ( @{$accts} ) {
if ( grep { $a eq $_ } @acl_users ) {
# The acl_users list has to be sent back to the caller.
# This trick works because the config hash is passed by
# reference.
push @{$$config{acl_users}}, $a;
}
else {
warning("Local user $a does not ".
"have access in queue $qname.");
}
}
} else {
delete $$config{acl_users};
}
# Uses saved module data structure %lrms_queue, which
# exists if queue_info is called before
if ( ! exists $lrms_queue{status} ) {
%lrms_queue = queue_info( $config, $qname );
}
foreach my $u ( @{$accts} ) {
if (exists $$config{scheduling_policy} and
lc($$config{scheduling_policy}) eq "maui") {
my $maui_freecpus;
my $showbf = (defined $$config{maui_bin_path}) ? $$config{maui_bin_path}."/showbf" : "showbf";
if (exists $$config{dedicated_node_string}) {
$showbf.=" -f ".$$config{dedicated_node_string};
}
unless (open SHOWBFOUTPUT, " $showbf -u $u |"){
error("error in executing $showbf -u $u ");
}
while (my $line= <SHOWBFOUTPUT>) {
if ($line =~ /^partition/) {
last;
}
if ($line =~ /no procs available/) {
$maui_freecpus= " 0";
last;
}
if ($line =~ /(\d+).+available for\s+([\w:]+)/) {
$maui_freecpus .= " ".$1.":".&count_time($2);
}
if ($line =~ /(\d+).+available with no timelimit/) {
$maui_freecpus.= " ".$1;
last;
}
}
$lrms_users{$u}{freecpus} = $maui_freecpus;
$lrms_users{$u}{queuelength} = $user_jobs_queued{$u} || 0;
}
else {
$user_jobs_running{$u} = 0 unless $user_jobs_running{$u};
if ($lrms_queue{maxuserrun} and ($lrms_queue{maxuserrun} - $user_jobs_running{$u}) < $lrms_queue{status} ) {
$lrms_users{$u}{freecpus} = $lrms_queue{maxuserrun} - $user_jobs_running{$u};
}
else {
$lrms_users{$u}{freecpus} = $lrms_queue{status};
}
$lrms_users{$u}{queuelength} = "$lrms_queue{queued}";
if ($lrms_users{$u}{freecpus} < 0) {
$lrms_users{$u}{freecpus} = 0;
}
if ($lrms_queue{maxcputime} and $lrms_users{$u}{freecpus} > 0) {
$lrms_users{$u}{freecpus} .= ':'.$lrms_queue{maxcputime};
}
}
}
return %lrms_users;
}
sub nodes_info($) {
my $config = shift;
my $path = $config->{pbs_bin_path};
my %hoh_pbsnodes = read_pbsnodes($path);
my %nodes;
for my $host (keys %hoh_pbsnodes) {
my ($isfree, $isavailable) = (0,0);
$isfree = 1 if $hoh_pbsnodes{$host}{state} =~ /free/;
$isavailable = 1 unless $hoh_pbsnodes{$host}{state} =~ /down|offline|unknown/;
$nodes{$host} = {isfree => $isfree, isavailable => $isavailable};
my $props = $hoh_pbsnodes{$host}{properties};
$nodes{$host}{tags} = [ split /,\s*/, $props ] if $props;
my $np = $hoh_pbsnodes{$host}{np};
$nodes{$host}{slots} = int $np if $np;
my $status = $hoh_pbsnodes{$host}{status};
if ($status) {
for my $token (split ',', $status) {
my ($opt, $val) = split '=', $token, 2;
next unless defined $val;
if ($opt eq 'totmem') {
$nodes{$host}{vmem} = int($1/1024) if $val =~ m/^(\d+)kb/;
} elsif ($opt eq 'physmem') {
$nodes{$host}{pmem} = int($1/1024) if $val =~ m/^(\d+)kb/;
} elsif ($opt eq 'ncpus') {
$nodes{$host}{lcpus} = int $val;
} elsif ($opt eq 'uname') {
my @uname = split ' ', $val;
$nodes{$host}{sysname} = $uname[0];
$nodes{$host}{release} = $uname[2] if @uname > 2;
$nodes{$host}{machine} = $uname[-1] if $uname[-1];
}
}
}
}
return %nodes;
}
1;
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