/usr/include/ncbi/vsmfile.h is in libvibrant6-dev 6.1.20170106-2.
This file is owned by root:root, with mode 0o644.
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1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 | /* vsmfile.h
* ===========================================================================
*
* PUBLIC DOMAIN NOTICE
* National Center for Biotechnology Information (NCBI)
*
* This software/database is a "United States Government Work" under the
* terms of the United States Copyright Act. It was written as part of
* the author's official duties as a United States Government employee and
* thus cannot be copyrighted. This software/database is freely available
* to the public for use. The National Library of Medicine and the U.S.
* Government do not place any restriction on its use or reproduction.
* We would, however, appreciate having the NCBI and the author cited in
* any work or product based on this material
*
* Although all reasonable efforts have been taken to ensure the accuracy
* and reliability of the software and data, the NLM and the U.S.
* Government do not and cannot warrant the performance or results that
* may be obtained by using this software or data. The NLM and the U.S.
* Government disclaim all warranties, express or implied, including
* warranties of performance, merchantability or fitness for any particular
* purpose.
*
* ===========================================================================
*
* File Name: vsmfile.h
*
* Author: Jim Ostell
*
* Version Creation Date: 11-29-94
*
* $Revision: 6.9 $
*
* File Description:
*
* Modifications:
* --------------------------------------------------------------------------
* Date Name Description of modification
* ------- ---------- -----------------------------------------------------
*
*
* ==========================================================================
*/
#ifndef _NCBI_VSMFile_
#define _NCBI_VSMFile_
#ifndef _NCBI_ObjMgr_
#include <objmgr.h>
#endif
#ifdef __cplusplus
extern "C" {
#endif
#include <objseq.h>
/*****************************************************************************
*
* VSMFileInit()
* initializes the LIBCALLBACK routines below by registering them
* as OPEN and SAVE procs with objmgr.
* These require VIBRANT and VSM
*
*****************************************************************************/
Boolean LIBCALL VSMFileInit PROTO((void));
Int2 LIBCALLBACK VSMGenericTextAsnOpen PROTO((Pointer data));
Int2 LIBCALLBACK VSMGenericBinAsnOpen PROTO((Pointer data));
Int2 LIBCALLBACK VSMFastaProtOpen PROTO((Pointer data));
Int2 LIBCALLBACK VSMFastaNucOpen PROTO((Pointer data));
Int2 LIBCALLBACK VSMGenericTextAsnSave PROTO((Pointer data));
Int2 LIBCALLBACK VSMGenericBinAsnSave PROTO((Pointer data));
Int2 LIBCALLBACK VSMFastaProtSave PROTO((Pointer data));
Int2 LIBCALLBACK VSMFastaNucSave PROTO((Pointer data));
Int2 LIBCALLBACK VSMSaveSetsAsFiles PROTO((Pointer data));
Int2 LIBCALLBACK VSMExportNucFeatureTable ( Pointer data );
Int2 LIBCALLBACK VSMExportNucFeatureTableSuppressProteinIDs ( Pointer data );
Int2 LIBCALLBACK VSMExportNucFeatureTableWithoutSources ( Pointer data );
Int2 LIBCALLBACK VSMExportNucFeatureTableWithoutSourcesSuppressProteinIDs (Pointer data);
Int2 LIBCALLBACK VSMExportNucFeatureTableSelectedFeatures (Pointer data);
Int2 LIBCALLBACK VSMExportNucFeatureTableSelectedFeaturesSuppressProteinIDs (Pointer data);
Int2 LIBCALLBACK VSMExportProteinFeatureTable (Pointer data);
Int2 LIBCALLBACK VSMFastaSortedProtSave (Pointer data);
Int2 LIBCALLBACK VSMFastaProtSaveWithProduct(Pointer data);
Int2 LIBCALLBACK VSMDescriptorAsnSave (Pointer data);
NLM_EXTERN void ViewSortedProteins (SeqEntryPtr sep);
extern void ExportSeqAnnotFeatureTable (FILE *fp, SeqAnnotPtr sap);
#ifdef __cplusplus
}
#endif
#endif
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