/usr/include/ncbi/salogif.h is in libvibrant6-dev 6.1.20170106-2.
This file is owned by root:root, with mode 0o644.
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1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 | #ifndef SALOGIF__H
#define SALOGIF__H
/* $RCSfile: salogif.h,v $ $Revision: 6.2 $ $Date: 2003/11/20 18:36:08 $
* ==========================================================================
*
* PUBLIC DOMAIN NOTICE
* National Center for Biotechnology Information
*
* This software/database is a "United States Government Work" under the
* terms of the United States Copyright Act. It was written as part of
* the author's official duties as a United States Government employee and
* thus cannot be copyrighted. This software/database is freely available
* to the public for use. The National Library of Medicine and the U.S.
* Government have not placed any restriction on its use or reproduction.
*
* Although all reasonable efforts have been taken to ensure the accuracy
* and reliability of the software and data, the NLM and the U.S.
* Government do not and cannot warrant the performance or results that
* may be obtained by using this software or data. The NLM and the U.S.
* Government disclaim all warranties, express or implied, including
* warranties of performance, merchantability or fitness for any particular
* purpose.
*
* Please cite the author in any work or product based on this material.
*
* ==========================================================================
*
* Author: Jinghui Zhang
*
* File Description:
* The Blast Search result visualization utilities
*
* --------------------------------------------------------------------------
* $Log: salogif.h,v $
* Revision 6.2 2003/11/20 18:36:08 dondosha
* Added function PrintOneAlignmentOverview to create an overview gif for one of the multiple query sequences
*
* Revision 6.1 2000/03/20 19:00:28 shavirin
* Initial revision in the new location.
*
* Revision 1.1 1999/04/15 15:20:20 egorov
* Initial commit
*
* Revision 1.1 1998/05/13 20:20:05 egorov
* This revision borns salogif.[hc] files for store functions for visualization results of BLAST search
*
* ==========================================================================
*/
#include <ncbi.h>
#undef NLM_EXTERN
#ifdef NLM_IMPORT
#define NLM_EXTERN NLM_IMPORT
#else
#define NLM_EXTERN extern
#endif
#ifdef __cplusplus
extern "C" {
#endif
/* Shows alignments in mouse clickable gif image
* and generates html page for this
*/
NLM_EXTERN Boolean PrintAlignmentOverview
(SeqAnnotPtr h_annot, /* output of blast search */
FILE* fp, /* file where output goes to */
const Char* formname, /* it is needed to specify name of embeded HTML form,
* create this form before if there is no one */
const Char* href, /* hyperlink location of the GIF file */
const Char* gif_name, /* GIF file name */
const Char* title /* title printed at the top of generated HTML output */
);
/* Shows alignments gif image for one query
* from a set of multiple queries.
*/
NLM_EXTERN Boolean PrintOneAlignmentOverview
(SeqAnnotPtr h_annot, /* output of blast search */
FILE* fp, /* file where output goes to */
const Char* formname, /* it is needed to specify name of embeded HTML form,
* create this form before if there is no one */
const Char* href, /* hyperlink location of the GIF file */
const Char* gif_name, /* GIF file name */
const Char* title, /* title printed at the top of generated HTML output */
int query_index /* Index of this query in the set of queries */
);
#ifdef __cplusplus
}
#endif
#undef NLM_EXTERN
#ifdef NLM_EXPORT
#define NLM_EXTERN NLM_EXPORT
#else
#define NLM_EXTERN
#endif
#endif /* SALOGIF__H */
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