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// @HEADER
// ***********************************************************************
//
// Tpetra: Templated Linear Algebra Services Package
// Copyright (2008) Sandia Corporation
//
// Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation,
// the U.S. Government retains certain rights in this software.
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// modification, are permitted provided that the following conditions are
// met:
//
// 1. Redistributions of source code must retain the above copyright
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// notice, this list of conditions and the following disclaimer in the
// documentation and/or other materials provided with the distribution.
//
// 3. Neither the name of the Corporation nor the names of the
// contributors may be used to endorse or promote products derived from
// this software without specific prior written permission.
//
// THIS SOFTWARE IS PROVIDED BY SANDIA CORPORATION "AS IS" AND ANY
// EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
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*/
#ifndef TPETRA_DETAILS_COMPUTEOFFSETS_HPP
#define TPETRA_DETAILS_COMPUTEOFFSETS_HPP
/// \file Tpetra_Details_computeOffsets.hpp
/// \brief Declare and define the function
/// Tpetra::Details::computeOffsetsFromCounts, an implementation
/// detail of Tpetra (in particular, of FixedHashTable, CrsGraph,
/// and CrsMatrix).
#include "TpetraCore_config.h"
#include "Kokkos_Core.hpp"
#include <limits>
#include <type_traits>
namespace Tpetra {
namespace Details {
//
// Implementation details for computeOffsetsFromCounts (see below).
// Users should skip over this anonymous namespace.
//
namespace { // (anonymous)
/// \brief Parallel scan functor for computing offsets from counts.
///
/// \warning This is NOT for users. It is an implementation detail of
/// the computeOffsetsFromCounts function (see below), which you
/// should call instead.
///
/// \tparam OffsetsViewType Type of the Kokkos::View specialization
/// used to store the offsets; the output array of this functor.
/// \tparam CountsViewType Type of the Kokkos::View specialization
/// used to store the counts; the input array of this functor.
/// \tparam SizeType The parallel loop index type; a built-in integer
/// type. Defaults to the type of the input View's dimension. You
/// may use a shorter type to improve performance.
///
/// The type of each entry of the \c ptr array must be able to store
/// the sum of all the entries of \c counts. This functor makes no
/// attempt to check for overflow in this sum.
template<class OffsetsViewType,
class CountsViewType,
class SizeType = typename OffsetsViewType::size_type>
class ComputeOffsetsFromCounts {
public:
static_assert (Kokkos::Impl::is_view<OffsetsViewType>::value,
"OffsetsViewType (the type of ptr) must be a Kokkos::View.");
static_assert (Kokkos::Impl::is_view<CountsViewType>::value,
"CountsViewType (the type of counts) must be a Kokkos::View.");
static_assert (std::is_same<typename OffsetsViewType::value_type,
typename OffsetsViewType::non_const_value_type>::value,
"OffsetsViewType (the type of ptr) must be a nonconst Kokkos::View.");
static_assert (static_cast<int> (OffsetsViewType::rank) == 1,
"OffsetsViewType (the type of ptr) must be a rank-1 Kokkos::View.");
static_assert (static_cast<int> (CountsViewType::rank) == 1,
"CountsViewType (the type of counts) must be a rank-1 Kokkos::View.");
static_assert (std::is_integral<typename OffsetsViewType::non_const_value_type>::value,
"The entries of ptr must be built-in integers.");
static_assert (std::is_integral<typename CountsViewType::non_const_value_type>::value,
"The entries of counts must be built-in integers.");
static_assert (std::is_integral<SizeType>::value,
"SizeType must be a built-in integer type.");
typedef OffsetsViewType offsets_view_type;
typedef typename CountsViewType::const_type counts_view_type;
typedef SizeType size_type;
typedef typename OffsetsViewType::non_const_value_type value_type;
/// \brief Constructor
///
/// \param offsets [out] (Preallocated) offsets; one entry longer
/// than \c counts
/// \param counts [in] View of bucket counts
ComputeOffsetsFromCounts (const offsets_view_type& offsets,
const counts_view_type& counts) :
offsets_ (offsets),
counts_ (counts),
size_ (counts.dimension_0 ())
{}
//! Set the initial value of the reduction result.
KOKKOS_INLINE_FUNCTION void init (value_type& dst) const
{
dst = 0;
}
//! Combine intermedate reduction results across threads.
KOKKOS_INLINE_FUNCTION void
join (volatile value_type& dst,
const volatile value_type& src) const
{
dst += src;
}
//! Reduction operator.
KOKKOS_INLINE_FUNCTION void
operator () (const size_type& i, value_type& update, const bool final) const
{
if (final) {
offsets_[i] = update;
}
if (i < size_) {
update += counts_[i];
}
}
private:
//! Offsets (output argument)
offsets_view_type offsets_;
//! Bucket counts (input argument).
counts_view_type counts_;
//! Number of entries in counts_.
size_type size_;
};
/// \brief Parallel scan functor for computing offsets from a constant count.
///
/// \warning This is NOT for users. It is an implementation detail of
/// the computeOffsetsFromConstantCount function (see below), which
/// you should call instead.
///
/// \tparam OffsetsViewType Type of the Kokkos::View specialization
/// used to store the offsets; the output array of this functor.
/// \tparam CountType Type of the count; must be a built-in integer
/// type.
/// \tparam SizeType The parallel loop index type; a built-in integer
/// type. Defaults to the type of the input View's dimension. You
/// may use a shorter type to improve performance.
///
/// The type of each entry of the \c ptr array must be able to store
/// <tt>ptr.dimension_0 () * count</tt>. This functor makes no
/// attempt to check for overflow in this sum.
template<class OffsetsViewType,
class CountType,
class SizeType = typename OffsetsViewType::size_type>
class ComputeOffsetsFromConstantCount {
public:
static_assert (Kokkos::Impl::is_view<OffsetsViewType>::value,
"OffsetsViewType (the type of ptr) must be a Kokkos::View.");
static_assert (std::is_same<typename OffsetsViewType::value_type,
typename OffsetsViewType::non_const_value_type>::value,
"OffsetsViewType (the type of ptr) must be a nonconst Kokkos::View.");
static_assert (static_cast<int> (OffsetsViewType::rank) == 1,
"OffsetsViewType (the type of ptr) must be a rank-1 Kokkos::View.");
static_assert (std::is_integral<typename OffsetsViewType::non_const_value_type>::value,
"The entries of ptr must be built-in integers.");
static_assert (std::is_integral<CountType>::value,
"CountType must be a built-in integer type.");
static_assert (std::is_integral<SizeType>::value,
"SizeType must be a built-in integer type.");
typedef OffsetsViewType offsets_view_type;
typedef CountType count_type;
typedef SizeType size_type;
typedef typename offsets_view_type::non_const_value_type value_type;
/// \brief Constructor
///
/// \param offsets [out] (Preallocated) offsets; one entry longer
/// than \c counts
/// \param count [in] The constant count
ComputeOffsetsFromConstantCount (const offsets_view_type& offsets,
const count_type count) :
offsets_ (offsets),
count_ (count),
size_ (offsets_.dimension_0 () == 0 ?
static_cast<size_type> (0) :
static_cast<size_type> (offsets_.dimension_0 () - 1))
{}
//! Set the initial value of the reduction result.
KOKKOS_INLINE_FUNCTION void init (value_type& dst) const
{
dst = 0;
}
//! Combine intermedate reduction results across threads.
KOKKOS_INLINE_FUNCTION void
join (volatile value_type& dst,
const volatile value_type& src) const
{
dst += src;
}
//! Reduction operator.
KOKKOS_INLINE_FUNCTION void
operator () (const size_type& i, value_type& update, const bool final) const
{
if (final) {
offsets_[i] = update;
}
if (i < size_) {
update += count_;
}
}
private:
//! Offsets (output argument)
offsets_view_type offsets_;
//! "Count" input argument
count_type count_;
//! Number of entries in offsets_, minus 1.
size_type size_;
};
} // namespace (anonymous)
/// \brief Compute offsets from counts
///
/// Compute offsets from counts via prefix sum:
///
/// ptr[i+1] = \sum_{j=0}^{i} counts[j]
///
/// Thus, ptr[i+1] - ptr[i] = counts[i], so that ptr[i+1] = ptr[i] +
/// counts[i]. If we stored counts[i] in ptr[i+1] on input, then the
/// formula is ptr[i+1] += ptr[i].
///
/// \return Sum of all counts; last entry of \c ptr.
///
/// \tparam OffsetsViewType Type of the Kokkos::View specialization
/// used to store the offsets; the output array of this function.
/// \tparam CountsViewType Type of the Kokkos::View specialization
/// used to store the counts; the input array of this function.
/// \tparam SizeType The parallel loop index type; a built-in integer
/// type. Defaults to the type of the input View's dimension. You
/// may use a shorter type to improve performance.
///
/// The type of each entry of the \c ptr array must be able to store
/// the sum of all the entries of \c counts. This functor makes no
/// attempt to check for overflow in this sum.
template<class OffsetsViewType,
class CountsViewType,
class SizeType = typename OffsetsViewType::size_type>
typename OffsetsViewType::non_const_value_type
computeOffsetsFromCounts (const OffsetsViewType& ptr,
const CountsViewType& counts)
{
static_assert (Kokkos::Impl::is_view<OffsetsViewType>::value,
"OffsetsViewType (the type of ptr) must be a Kokkos::View.");
static_assert (Kokkos::Impl::is_view<CountsViewType>::value,
"CountsViewType (the type of counts) must be a Kokkos::View.");
static_assert (std::is_same<typename OffsetsViewType::value_type,
typename OffsetsViewType::non_const_value_type>::value,
"OffsetsViewType (the type of ptr) must be a nonconst Kokkos::View.");
static_assert (static_cast<int> (OffsetsViewType::rank) == 1,
"OffsetsViewType (the type of ptr) must be a rank-1 Kokkos::View.");
static_assert (static_cast<int> (CountsViewType::rank) == 1,
"CountsViewType (the type of counts) must be a rank-1 Kokkos::View.");
static_assert (std::is_integral<typename OffsetsViewType::non_const_value_type>::value,
"The entries of ptr must be built-in integers.");
static_assert (std::is_integral<typename CountsViewType::non_const_value_type>::value,
"The entries of counts must be built-in integers.");
static_assert (std::is_integral<SizeType>::value,
"SizeType must be a built-in integer type.");
typedef typename CountsViewType::non_const_value_type count_type;
typedef typename OffsetsViewType::non_const_value_type offset_type;
typedef typename OffsetsViewType::device_type device_type;
typedef typename device_type::execution_space execution_space;
typedef typename device_type::memory_space memory_space;
const auto numOffsets = ptr.size ();
const auto numCounts = counts.size ();
if (numOffsets != 0) {
TEUCHOS_TEST_FOR_EXCEPTION
(numCounts >= numOffsets, std::invalid_argument,
"computeOffsetsFromCounts: counts.dimension_0() = " << numCounts
<< " >= ptr.dimension_0() = " << numOffsets << ".");
Kokkos::RangePolicy<execution_space, SizeType> range (0, numCounts+1);
try {
// We always want to run in the offsets' execution space, since
// that is the output argument. (This gives us first touch, if
// applicable, and in general improves locality.) However, we
// need to make sure that we can access counts from this
// execution space. If we can't, we need to make a temporary
// "device" copy of counts in offsets' memory space.
// The first template parameter needs to be a memory space.
constexpr bool countsAccessibleFromOffsets =
Kokkos::Impl::VerifyExecutionCanAccessMemorySpace<memory_space,
typename CountsViewType::memory_space>::value;
if (countsAccessibleFromOffsets) {
typedef ComputeOffsetsFromCounts<OffsetsViewType, CountsViewType,
SizeType> functor_type;
// offsets' execution space can access counts
functor_type functor (ptr, counts);
Kokkos::parallel_scan (range, functor);
}
else {
// Make a temporary copy of counts in offsets' execution
// space. Use the same array layout as the original, so we
// can deep copy.
typedef Kokkos::View<count_type*, typename CountsViewType::array_layout,
device_type> dev_counts_type;
dev_counts_type counts_d ("counts_d", numCounts);
Kokkos::deep_copy (counts_d, counts);
typedef ComputeOffsetsFromCounts<OffsetsViewType, dev_counts_type,
SizeType> functor_type;
functor_type functor (ptr, counts_d);
Kokkos::parallel_scan (range, functor);
}
}
catch (std::exception& e) {
TEUCHOS_TEST_FOR_EXCEPTION
(true, std::runtime_error, "computeOffsetsFromCounts: parallel_scan "
"(with device_type Kokkos::Device<" <<
typeid (execution_space).name () << ", " <<
typeid (memory_space).name () << ">) threw an std::exception: "
<< e.what ());
}
catch (...) {
TEUCHOS_TEST_FOR_EXCEPTION
(true, std::runtime_error, "Kokkos::parallel_scan threw an "
"exception not a subclass of std::exception");
}
// Get the sum of all the entries of counts from the last entry of
// ptr. The second branch of this 'if' always works, but we save
// a little time by specializing for non-CUDA execution spaces.
if (Kokkos::Impl::VerifyExecutionCanAccessMemorySpace<Kokkos::HostSpace,
memory_space>::value) {
return ptr[numCounts];
}
else {
auto ptr_last = Kokkos::subview (ptr, numCounts);
auto ptr_last_h = Kokkos::create_mirror_view (ptr_last);
Kokkos::deep_copy (ptr_last_h, ptr_last);
return ptr_last_h ();
}
}
else {
return static_cast<offset_type> (0);
}
}
/// \brief Compute offsets from a constant count
///
/// Compute offsets from a constant count via prefix sum:
///
/// ptr[i+1] = \sum_{j=0}^{i} count
///
/// Thus, ptr[i+1] - ptr[i] = count, so that ptr[i+1] = ptr[i] +
/// count.
///
/// \return Sum of all counts; last entry of \c ptr.
///
/// \tparam OffsetsViewType Type of the Kokkos::View specialization
/// used to store the offsets; the output array of this function.
/// \tparam CountType Type of the constant count; the input argument
/// of this function.
/// \tparam SizeType The parallel loop index type; a built-in integer
/// type. Defaults to the type of the output View's dimension. You
/// may use a shorter type to improve performance.
///
/// The type of each entry of the \c ptr array must be able to store
/// <tt>ptr.dimension_0 () * count</tt>. This functor makes no
/// attempt to check for overflow in this sum.
template<class OffsetsViewType,
class CountType,
class SizeType = typename OffsetsViewType::size_type>
typename OffsetsViewType::non_const_value_type
computeOffsetsFromConstantCount (const OffsetsViewType& ptr,
const CountType& count)
{
static_assert (Kokkos::Impl::is_view<OffsetsViewType>::value,
"OffsetsViewType (the type of ptr) must be a Kokkos::View.");
static_assert (std::is_same<typename OffsetsViewType::value_type,
typename OffsetsViewType::non_const_value_type>::value,
"OffsetsViewType (the type of ptr) must be a nonconst Kokkos::View.");
static_assert (static_cast<int> (OffsetsViewType::rank) == 1,
"OffsetsViewType (the type of ptr) must be a rank-1 Kokkos::View.");
static_assert (std::is_integral<typename OffsetsViewType::non_const_value_type>::value,
"The entries of ptr must be built-in integers.");
static_assert (std::is_integral<CountType>::value,
"CountType must be a built-in integer type.");
static_assert (std::is_integral<SizeType>::value,
"SizeType must be a built-in integer type.");
typedef typename std::decay<CountType>::type count_type;
typedef typename OffsetsViewType::non_const_value_type offset_type;
typedef typename OffsetsViewType::device_type device_type;
typedef typename device_type::execution_space execution_space;
typedef typename device_type::memory_space memory_space;
const auto numOffsets = ptr.size ();
if (numOffsets != 0) {
ComputeOffsetsFromConstantCount<OffsetsViewType, count_type,
SizeType> functor (ptr, count);
Kokkos::RangePolicy<execution_space, SizeType> range (0, numOffsets);
try {
Kokkos::parallel_scan (range, functor);
}
catch (std::exception& e) {
TEUCHOS_TEST_FOR_EXCEPTION
(true, std::runtime_error, "computeOffsetsFromConstantCount: "
"parallel_scan (with device_type Kokkos::Device<" <<
typeid (execution_space).name () << ", " <<
typeid (memory_space).name () << ">) threw an std::exception: "
<< e.what ());
}
catch (...) {
TEUCHOS_TEST_FOR_EXCEPTION
(true, std::runtime_error, "Kokkos::parallel_scan threw an "
"exception not a subclass of std::exception");
}
// Get the sum of all the entries of counts from the last entry of
// ptr. The second branch of this 'if' always works, but we save
// a little time by specializing for non-CUDA execution spaces.
if (Kokkos::Impl::VerifyExecutionCanAccessMemorySpace<Kokkos::HostSpace,
memory_space>::value) {
return ptr[numOffsets - 1];
}
else {
auto ptr_last = Kokkos::subview (ptr, numOffsets - 1);
auto ptr_last_h = Kokkos::create_mirror_view (ptr_last);
Kokkos::deep_copy (ptr_last_h, ptr_last);
return ptr_last_h ();
}
}
else {
return static_cast<offset_type> (0);
}
}
} // namespace Details
} // namespace Tpetra
#endif // TPETRA_DETAILS_COMPUTEOFFSETS_HPP
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