This file is indexed.

/usr/include/trilinos/Thyra_TpetraMultiVector_decl.hpp is in libtrilinos-thyra-dev 12.12.1-5.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
// @HEADER
// ***********************************************************************
//
//    Thyra: Interfaces and Support for Abstract Numerical Algorithms
//                 Copyright (2004) Sandia Corporation
//
// Under terms of Contract DE-AC04-94AL85000, there is a non-exclusive
// license for use of this work by or on behalf of the U.S. Government.
//
// Redistribution and use in source and binary forms, with or without
// modification, are permitted provided that the following conditions are
// met:
//
// 1. Redistributions of source code must retain the above copyright
// notice, this list of conditions and the following disclaimer.
//
// 2. Redistributions in binary form must reproduce the above copyright
// notice, this list of conditions and the following disclaimer in the
// documentation and/or other materials provided with the distribution.
//
// 3. Neither the name of the Corporation nor the names of the
// contributors may be used to endorse or promote products derived from
// this software without specific prior written permission.
//
// THIS SOFTWARE IS PROVIDED BY SANDIA CORPORATION "AS IS" AND ANY
// EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
// PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL SANDIA CORPORATION OR THE
// CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
// PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
// LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
// NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
// SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
//
// Questions? Contact Roscoe A. Bartlett (bartlettra@ornl.gov)
//
// ***********************************************************************
// @HEADER

#ifndef THYRA_TPETRA_MULTIVECTOR_DECL_HPP
#define THYRA_TPETRA_MULTIVECTOR_DECL_HPP

#include "Thyra_SpmdMultiVectorDefaultBase.hpp"
#include "Thyra_TpetraVectorSpace_decl.hpp"
#include "Tpetra_MultiVector.hpp"
#include "Teuchos_ConstNonconstObjectContainer.hpp"


namespace Thyra {


/** \brief Concrete implementation of Thyra::MultiVector in terms of
 * Tpetra::MultiVector.
 *
 * \todo Finish documentation!
 *
 * \ingroup Tpetra_Thyra_Op_Vec_adapters_grp
 */
template <class Scalar, class LocalOrdinal, class GlobalOrdinal, class Node>
class TpetraMultiVector
  : virtual public SpmdMultiVectorDefaultBase<Scalar>
{
public:

  /** @name Constructors/initializers/accessors */
  //@{

  /// Construct to uninitialized
  TpetraMultiVector();

  /** \brief Initialize.
   */
  void initialize(
    const RCP<const TpetraVectorSpace<Scalar,LocalOrdinal,GlobalOrdinal,Node> > &tpetraVectorSpace,
    const RCP<const ScalarProdVectorSpaceBase<Scalar> > &domainSpace,
    const RCP<Tpetra::MultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node> > &tpetraMultiVector
    );

  /** \brief Initialize.
   */
  void constInitialize(
    const RCP<const TpetraVectorSpace<Scalar,LocalOrdinal,GlobalOrdinal,Node> > &tpetraVectorSpace,
    const RCP<const ScalarProdVectorSpaceBase<Scalar> > &domainSpace,
    const RCP<const Tpetra::MultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node> > &tpetraMultiVector
    );

  /** \brief Extract the underlying non-const Tpetra::MultiVector object.*/
  RCP<Tpetra::MultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node> >
  getTpetraMultiVector();

  /** \brief Extract the underlying const Tpetra::MultiVector object.*/
  RCP<const Tpetra::MultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node> >
  getConstTpetraMultiVector() const;

  //@}

  /** @name Overridden public functions form MultiVectorAdapterBase */
  //@{
  /** \brief . */
  RCP< const ScalarProdVectorSpaceBase<Scalar> >
  domainScalarProdVecSpc() const;
  //@}

protected:

  /** @name Overridden protected functions from MultiVectorBase */
  //@{
  /** \brief . */
  virtual void assignImpl(Scalar alpha);

  /** \brief . */
  virtual void assignMultiVecImpl(const MultiVectorBase<Scalar>& mv);

  /** \brief . */
  virtual void scaleImpl(Scalar alpha);

  /** \brief . */
  virtual void updateImpl(
    Scalar alpha,
    const MultiVectorBase<Scalar>& mv
    );

  /** \brief . */
  virtual void linearCombinationImpl(
    const ArrayView<const Scalar>& alpha,
    const ArrayView<const Ptr<const MultiVectorBase<Scalar> > >& mv,
    const Scalar& beta
    );

  /** \brief . */
  virtual void dotsImpl(
    const MultiVectorBase<Scalar>& mv,
    const ArrayView<Scalar>& prods
    ) const;

  /** \brief . */
  virtual void norms1Impl(
    const ArrayView<typename ScalarTraits<Scalar>::magnitudeType>& norms
    ) const;

  /** \brief . */
  virtual void norms2Impl(
    const ArrayView<typename ScalarTraits<Scalar>::magnitudeType>& norms
    ) const;

  /** \brief . */
  virtual void normsInfImpl(
    const ArrayView<typename ScalarTraits<Scalar>::magnitudeType>& norms
    ) const;

  /** \brief . */
  RCP<const VectorBase<Scalar> > colImpl(Ordinal j) const;
  /** \brief . */
  RCP<VectorBase<Scalar> > nonconstColImpl(Ordinal j);

  /** \brief . */
  RCP<const MultiVectorBase<Scalar> >
  contigSubViewImpl(const Range1D& colRng) const;
  /** \brief . */
  RCP<MultiVectorBase<Scalar> >
  nonconstContigSubViewImpl(const Range1D& colRng);
  /** \brief . */
  RCP<const MultiVectorBase<Scalar> >
  nonContigSubViewImpl(const ArrayView<const int>& cols_in) const;
  /** \brief . */
  RCP<MultiVectorBase<Scalar> >
  nonconstNonContigSubViewImpl(const ArrayView<const int>& cols_in);

  /** \brief . */
  virtual void mvMultiReductApplyOpImpl(
    const RTOpPack::RTOpT<Scalar> &primary_op,
    const ArrayView<const Ptr<const MultiVectorBase<Scalar> > > &multi_vecs,
    const ArrayView<const Ptr<MultiVectorBase<Scalar> > > &targ_multi_vecs,
    const ArrayView<const Ptr<RTOpPack::ReductTarget> > &reduct_objs,
    const Ordinal primary_global_offset
    ) const;

  /** \brief . */
  void acquireDetachedMultiVectorViewImpl(
    const Range1D &rowRng,
    const Range1D &colRng,
    RTOpPack::ConstSubMultiVectorView<Scalar>* sub_mv
    ) const;

  /** \brief . */
  void acquireNonconstDetachedMultiVectorViewImpl(
    const Range1D &rowRng,
    const Range1D &colRng,
    RTOpPack::SubMultiVectorView<Scalar>* sub_mv
    );

  /** \brief . */
  void commitNonconstDetachedMultiVectorViewImpl(
    RTOpPack::SubMultiVectorView<Scalar>* sub_mv
    );

//  /** \brief . */
//  RCP<const MultiVectorBase<Scalar> >
//  nonContigSubViewImpl( const ArrayView<const int> &cols ) const;
//  /** \brief . */
//  RCP<MultiVectorBase<Scalar> >
//  nonconstNonContigSubViewImpl( const ArrayView<const int> &cols );
  //@}

  /** @name Overridden protected functions from SpmdMultiVectorBase */
  //@{
  /** \brief . */
  RCP<const SpmdVectorSpaceBase<Scalar> > spmdSpaceImpl() const;
  /** \brief . */
  void getNonconstLocalMultiVectorDataImpl(
    const Ptr<ArrayRCP<Scalar> > &localValues, const Ptr<Ordinal> &leadingDim
    );
  /** \brief . */
  void getLocalMultiVectorDataImpl(
    const Ptr<ArrayRCP<const Scalar> > &localValues, const Ptr<Ordinal> &leadingDim
    ) const;

  //@}

  /** @name Overridden protected functions from MultiVectorAdapterBase */
  //@{
  /** \brief . */
  virtual void euclideanApply(
    const EOpTransp M_trans,
    const MultiVectorBase<Scalar> &X,
    const Ptr<MultiVectorBase<Scalar> > &Y,
    const Scalar alpha,
    const Scalar beta
    ) const;

  //@}

private:

  // ///////////////////////////////////////
  // Private data members

  RCP<const TpetraVectorSpace<Scalar,LocalOrdinal,GlobalOrdinal,Node> > tpetraVectorSpace_;
  RCP<const ScalarProdVectorSpaceBase<Scalar> > domainSpace_;
  Teuchos::ConstNonconstObjectContainer<Tpetra::MultiVector<Scalar, LocalOrdinal,GlobalOrdinal,Node> >
  tpetraMultiVector_;

  // ////////////////////////////////////
  // Private member functions

  template<class TpetraMultiVector_t>
  void initializeImpl(
    const RCP<const TpetraVectorSpace<Scalar,LocalOrdinal,GlobalOrdinal,Node> > &tpetraVectorSpace,
    const RCP<const ScalarProdVectorSpaceBase<Scalar> > &domainSpace,
    const RCP<TpetraMultiVector_t> &tpetraMultiVector
    );

  // Non-throwing Tpetra MultiVector extraction methods.
  // Return null if casting failed.
  RCP<Tpetra::MultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node> >
  getTpetraMultiVector(const RCP<MultiVectorBase<Scalar> >& mv) const;

  RCP<const Tpetra::MultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node> >
  getConstTpetraMultiVector(const RCP<const MultiVectorBase<Scalar> >& mv) const;

};


/** \brief Nonmember constructor for TpetraMultiVector.
 *
 * \relates TpetraMultiVector.
 */
template <class Scalar, class LocalOrdinal, class GlobalOrdinal, class Node>
RCP<TpetraMultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node> >
tpetraMultiVector(
  const RCP<const TpetraVectorSpace<Scalar,LocalOrdinal,GlobalOrdinal,Node> > &tpetraVectorSpace,
  const RCP<const ScalarProdVectorSpaceBase<Scalar> > &domainSpace,
  const RCP<Tpetra::MultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node> > &tpetraMultiVector
  )
{
  RCP<TpetraMultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node> > tmv =
    Teuchos::rcp(new TpetraMultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node>);
  tmv->initialize(tpetraVectorSpace, domainSpace, tpetraMultiVector);
  return tmv;
}


/** \brief Nonmember constructor for TpetraMultiVector.
 *
 * \relates TpetraMultiVector.
 */
template <class Scalar, class LocalOrdinal, class GlobalOrdinal, class Node>
RCP<const TpetraMultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node> >
constTpetraMultiVector(
  const RCP<const TpetraVectorSpace<Scalar,LocalOrdinal,GlobalOrdinal,Node> > &tpetraVectorSpace,
  const RCP<const ScalarProdVectorSpaceBase<Scalar> > &domainSpace,
  const RCP<const Tpetra::MultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node> > &tpetraMultiVector
  )
{
  RCP<TpetraMultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node> > tmv =
    Teuchos::rcp(new TpetraMultiVector<Scalar,LocalOrdinal,GlobalOrdinal,Node>);
  tmv->constInitialize(tpetraVectorSpace, domainSpace, tpetraMultiVector);
  return tmv;
}


} // end namespace Thyra


#endif // THYRA_TPETRA_MULTIVECTOR_DECL_HPP