/usr/include/trilinos/Shards_CellTopology.hpp is in libtrilinos-shards-dev 12.12.1-5.
This file is owned by root:root, with mode 0o644.
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//@HEADER
// ************************************************************************
//
// Shards : Shared Discretization Tools
// Copyright 2008, 2011 Sandia Corporation
//
// Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation,
// the U.S. Government retains certain rights in this software.
//
// Redistribution and use in source and binary forms, with or without
// modification, are permitted provided that the following conditions are
// met:
//
// 1. Redistributions of source code must retain the above copyright
// notice, this list of conditions and the following disclaimer.
//
// 2. Redistributions in binary form must reproduce the above copyright
// notice, this list of conditions and the following disclaimer in the
// documentation and/or other materials provided with the distribution.
//
// 3. Neither the name of the Corporation nor the names of the
// contributors may be used to endorse or promote products derived from
// this software without specific prior written permission.
//
// THIS SOFTWARE IS PROVIDED BY SANDIA CORPORATION "AS IS" AND ANY
// EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
// PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL SANDIA CORPORATION OR THE
// CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
// PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
// LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
// NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
// SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
//
// Questions? Contact Carter Edwards (hcedwar@sandia.gov),
// Pavel Bochev (pbboche@sandia.gov), or
// Denis Ridzal (dridzal@sandia.gov).
//
// ************************************************************************
//@HEADER
*/
#ifndef Shards_CellTopology_hpp
#define Shards_CellTopology_hpp
#ifdef HAVE_SHARDS_DEBUG
#define SHARDS_REQUIRE( S ) S
#else
#define SHARDS_REQUIRE( S ) /* empty */
#endif
#include <string>
#include <vector>
#include <Shards_CellTopologyData.h>
#include <Shards_BasicTopologies.hpp>
namespace shards {
/** \addtogroup shards_package_cell_topology
* \{
*/
/*------------------------------------------------------------------------*/
class CellTopology ;
/** \brief Overloaded << operator for CellTopologyData objects. */
//std::ostream & operator << ( std::ostream & , const CellTopologyData & );
/** \brief Overloaded << operator for CellTopology objects. */
std::ostream & operator << ( std::ostream & , const CellTopology & );
/** \enum Shards::ECellType
\brief Enumeration of cell types in Shards
*/
enum ECellType {
ALL_CELLS = 0,
STANDARD_CELL,
NONSTANDARD_CELL
};
inline std::string ECellTypeToString(ECellType cellType) {
std::string retString;
switch(cellType){
case ALL_CELLS: retString = "All"; break;
case STANDARD_CELL: retString = "Standard"; break;
case NONSTANDARD_CELL: retString = "Nonstandard"; break;
default: retString = "Invalid Cell";
}
return retString;
}
/** \enum Shards::ETopologyType
\brief Enumeration of topology types in Shards
*/
enum ETopologyType {
ALL_TOPOLOGIES,
BASE_TOPOLOGY,
EXTENDED_TOPOLOGY
};
inline std::string ETopologyTypeToString(ETopologyType topologyType) {
std::string retString;
switch(topologyType){
case ALL_TOPOLOGIES: retString = "All"; break;
case BASE_TOPOLOGY: retString = "Base"; break;
case EXTENDED_TOPOLOGY: retString = "Extended"; break;
default: retString = "Invalid Topology";
}
return retString;
}
/** \brief Returns an std::vector with all cell topologies that meet the specified
selection flags.
\param topologies [out] - vector with all topologies that
\param cellDim [in] - cell dimension; 0, 1, 2, 3, or 4 (default = all dimensions)
\param cellType [in] - cell type: default = ALL_CELLS
\param topologyType [in] - topology type: default = ALL_TOPOLOGIES
*/
void getTopologies(std::vector<shards::CellTopology>& topologies,
const unsigned cellDim = 4,
const ECellType cellType = ALL_CELLS,
const ETopologyType topologyType = ALL_TOPOLOGIES);
/** \brief Checks if the cell topology is predefined in shards
\param cell [in] - cell topology
\return 1 if the cell topology is defined in shards,
0 if it is a custom, user-defined cell-topology
*/
int isPredefinedCell(const CellTopology & cell);
/*------------------------------------------------------------------------*/
/** \class shards::CellTopology
* \brief Provide input checked access (in debug mode) to
* \ref shards::CellTopologyData "cell topology data"
* and a procedure to create custom cell topologies.
*
* Input checking is compiled in when the HAVE_SHARDS_DEBUG macro is defined.
*
* \author Created by P. Bochev, H. C. Edwards and D. Ridzal.
*
* \nosubgrouping
*
* Two kinds of CellTopology objects are used:
* (1) wrappers for the predefined basic cell topologies and
* (2) temporary custom cell topologies.
*
* A temporary custom cell topology is created by a calling code,
* passed to a computational kernel such as those supplied by Intrepid,
* and then discarded. The use case is discretization function
* evaluations on a arbitrary polyhedon mesh does not have
* standard or consistent cell topologies.
*/
class CellTopology {
private:
/** \brief Throws runtime_error if CellTopology object is null or hase null
base topology
*/
void requireCell() const ;
/** \brief Throws invalid_argument if subcell dimension exceedes the maximal
* admissible space dimension 3.
* \param subcell_dim [in] - spatial dimension of a subcell
*/
void requireDimension( const unsigned subcellDim ) const ;
/** \brief Throws invalid_argument if subcell_ord exceeds the actual number
* of subcells with specified dimension.
* \param subcell_dim [in] - spatial dimension of a subcell
* \param subcell_ord [in] - subcell ordinal
*/
void requireSubcell( const unsigned subcellDim ,
const unsigned subcellOrd ) const ;
/** \brief Throws invalid_argument if node_ord exceeds the actual number
* of nodes in the subcell with specified dimension and ordinal.
* \param subcell_dim [in] - spatial dimension of a subcell
* \param subcell_ord [in] - subcell ordinal
* \param node_ord [in] - node ordinal
*/
void requireNodeMap( const unsigned subcellDim ,
const unsigned subcellOrd ,
const unsigned nodeOrd ) const ;
void requireNodePermutation( const unsigned permutationOrd ,
const unsigned nodeOrd ) const ;
const CellTopologyData * m_cell ;
public:
/*------------------------------------------------------------------*/
/** \name Safe query methods
* \{
*/
/** \brief Dimension of this cell topology */
unsigned getDimension() const
{
SHARDS_REQUIRE( requireCell() );
return m_cell->dimension ;
}
/** \brief Unique key for this cell topology;
* under certain subcell uniformity conditions.
*
* The key is only guaranteed to be unique for predefined cell topologies.
*/
unsigned getKey() const
{
SHARDS_REQUIRE( requireCell() );
return m_cell->key ;
}
/** \brief Unique key for this cell's base topology;
* under certain subcell uniformity conditions.
*
* The key is only guaranteed to be unique for predefined cell topologies.
*/
unsigned getBaseKey() const
{
SHARDS_REQUIRE( requireCell() );
return m_cell->base->key ;
}
/** \brief Unique name for this cell topology;
*
* The name is only guaranteed to be unique for predefined cell topologies.
* A calling code may construct custom cell topologies with arbitrary names.
*/
const char* getName() const
{
SHARDS_REQUIRE( requireCell() );
return m_cell->name ;
}
/** \brief Unique name for this cell's base topology.
*
*/
const char* getBaseName() const
{
SHARDS_REQUIRE( requireCell() );
return m_cell->base->name ;
}
/** \brief Node count of this cell topology */
unsigned getNodeCount() const
{
SHARDS_REQUIRE( requireCell() );
return m_cell->node_count ;
}
/** \brief Vertex count of this cell topology */
unsigned getVertexCount() const
{
SHARDS_REQUIRE( requireCell() );
return m_cell->vertex_count ;
}
/** \brief Edge boundary subcell count of this cell topology */
unsigned getEdgeCount() const
{
SHARDS_REQUIRE( requireCell() );
return m_cell->edge_count ;
}
/** \brief Face boundary subcell count of this cell topology */
unsigned getFaceCount() const
{
SHARDS_REQUIRE( requireCell() );
return m_cell->dimension == 3 ? m_cell->side_count : 0 ;
}
/** \brief Side boundary subcell count of this cell topology */
unsigned getSideCount() const
{
SHARDS_REQUIRE( requireCell() );
return m_cell->side_count ;
}
/** \brief This cell's raw topology data */
bool isValid() const
{ return m_cell != 0 ; }
/** \brief This cell's raw topology data */
const CellTopologyData * getCellTopologyData() const
{ return m_cell ; }
/** \brief This cell's base cell topology's raw topology data */
const CellTopologyData * getBaseCellTopologyData() const
{
SHARDS_REQUIRE( requireCell() );
return m_cell->base ;
}
/** \brief Raw cell topology data for a subcell of the
* given dimension and ordinal.
* \param subcell_dim [in] - spatial dimension of the subcell
* \param subcell_ord [in] - subcell ordinal
*/
const CellTopologyData * getCellTopologyData( const unsigned subcell_dim ,
const unsigned subcell_ord ) const
{
SHARDS_REQUIRE( requireCell() );
SHARDS_REQUIRE( requireDimension(subcell_dim) );
SHARDS_REQUIRE( requireSubcell(subcell_dim,subcell_ord) );
return m_cell->subcell[subcell_dim][subcell_ord].topology ;
}
/** \brief Raw cell topology data for the base topology of a subcell of the
* given dimension and ordinal.
* \param subcell_dim [in] - spatial dimension of the subcell
* \param subcell_ord [in] - subcell ordinal
*/
const CellTopologyData * getBaseCellTopologyData( const unsigned subcell_dim ,
const unsigned subcell_ord ) const
{
return getCellTopologyData(subcell_dim,subcell_ord)->base ;
}
/** \brief Key of a subcell of the given dimension and ordinal.
* \param subcell_dim [in] - spatial dimension of the subcell
* \param subcell_ord [in] - subcell ordinal
*/
unsigned getKey( const unsigned subcell_dim ,
const unsigned subcell_ord ) const
{
return getCellTopologyData(subcell_dim,subcell_ord)->key ;
}
/** \brief Name of a subcell of the given dimension and ordinal.
* \param subcell_dim [in] - spatial dimension of the subcell
* \param subcell_ord [in] - subcell ordinal
*/
const char * getName(const unsigned subcell_dim,
const unsigned subcell_ord) const
{
return getCellTopologyData(subcell_dim,subcell_ord) -> name;
}
/** \brief Node count of a subcell of the given dimension and ordinal.
* \param subcell_dim [in] - spatial dimension of the subcell
* \param subcell_ord [in] - subcell ordinal
*/
unsigned getNodeCount( const unsigned subcell_dim ,
const unsigned subcell_ord ) const
{
return getCellTopologyData(subcell_dim,subcell_ord)->node_count ;
}
/** \brief Vertex count of a subcell of the given dimension and ordinal.
* \param subcell_dim [in] - spatial dimension of the subcell
* \param subcell_ord [in] - subcell ordinal
*/
unsigned getVertexCount( const unsigned subcell_dim ,
const unsigned subcell_ord ) const
{
return getCellTopologyData(subcell_dim,subcell_ord)->vertex_count ;
}
/** \brief Edge count of a subcell of the given dimension and ordinal.
* \param subcell_dim [in] - spatial dimension of the subcell
* \param subcell_ord [in] - subcell ordinal
*/
unsigned getEdgeCount( const unsigned subcell_dim ,
const unsigned subcell_ord ) const
{
return getCellTopologyData(subcell_dim,subcell_ord)->edge_count ;
}
/** \brief Side count of a subcell of the given dimension and ordinal.
* \param subcell_dim [in] - spatial dimension of the subcell
* \param subcell_ord [in] - subcell ordinal
*/
unsigned getSideCount( const unsigned subcell_dim ,
const unsigned subcell_ord ) const
{
return getCellTopologyData(subcell_dim,subcell_ord)->side_count ;
}
/** \brief Subcell count of subcells of the given dimension.
* \param subcell_dim [in] - spatial dimension of the subcell
*/
unsigned getSubcellCount( const unsigned subcell_dim ) const
{
SHARDS_REQUIRE( requireCell() );
SHARDS_REQUIRE( requireDimension(subcell_dim) );
return m_cell->subcell_count[subcell_dim] ;
}
/** \brief Query if all subcells of the given dimension
* have the same cell topology.
* \param subcell_dim [in] - spatial dimension of the subcell
*/
bool getSubcellHomogeneity( const unsigned subcell_dim ) const
{
SHARDS_REQUIRE( requireCell() );
SHARDS_REQUIRE( requireDimension(subcell_dim) );
return 0 != m_cell->subcell_homogeneity[subcell_dim] ;
}
/** \brief Mapping from a subcell's node ordinal to a
* node ordinal of this parent cell topology.
* \param subcell_dim [in] - spatial dimension of the subcell
* \param subcell_ord [in] - subcell ordinal
* \param subcell_node_ord [in] - node ordinal relative to subcell
*/
unsigned getNodeMap( const unsigned subcell_dim ,
const unsigned subcell_ord ,
const unsigned subcell_node_ord ) const
{
SHARDS_REQUIRE( requireCell() );
SHARDS_REQUIRE( requireDimension(subcell_dim) );
SHARDS_REQUIRE( requireSubcell(subcell_dim,subcell_ord) );
SHARDS_REQUIRE( requireNodeMap(subcell_dim,subcell_ord,subcell_node_ord));
return m_cell->subcell[subcell_dim][subcell_ord].node[subcell_node_ord];
}
/** \brief Number of node permutations defined for this cell */
unsigned getNodePermutationCount() const
{
SHARDS_REQUIRE(requireCell());
return m_cell->permutation_count ;
}
/** \brief Permutation of a cell's node ordinals.
* \param permutation_ordinal [in]
* \param node_ordinal [in]
*/
unsigned getNodePermutation( const unsigned permutation_ord ,
const unsigned node_ord ) const
{
SHARDS_REQUIRE(requireCell());
SHARDS_REQUIRE(requireNodePermutation(permutation_ord,node_ord));
return m_cell->permutation[permutation_ord].node[node_ord];
}
/** \brief Permutation of a cell's node ordinals.
* \param permutation_ordinal [in]
* \param node_ordinal [in]
*/
unsigned getNodePermutationPolarity( const unsigned permutation_ord ) const
{
SHARDS_REQUIRE(requireCell());
SHARDS_REQUIRE(requireNodePermutation(permutation_ord,0));
return m_cell->permutation[permutation_ord].polarity;
}
/** \brief Inverse permutation of a cell's node ordinals.
* \param permutation_ordinal [in]
* \param node_ordinal [in]
*/
unsigned getNodePermutationInverse( const unsigned permutation_ord ,
const unsigned node_ord ) const
{
SHARDS_REQUIRE(requireCell());
SHARDS_REQUIRE(requireNodePermutation(permutation_ord,node_ord));
return m_cell->permutation_inverse[permutation_ord].node[node_ord];
}
/** \} */
/*------------------------------------------------------------------*/
/** \name Constructors and destructor
* \{
*/
/** \brief Wrapper for safe access to a raw cell topology data.
* \param cell [in] - pointer to raw cell topology
* Example use: the statements
* \code
* CellTopology myTri_3 ( getCellTopologyData< Triangle<3> >() )
* CellTopology myTet_10( getCellTopologyData< Tetrahedron<10>() );
* \endcode
* wraps Triangle<3> and Tetrahedron<10> (defined in Shards_BasicTopologies)
*/
CellTopology( const CellTopologyData * cell )
: m_cell( cell )
{}
/** \brief Constructs custom 1-cell (line) with base topology Line<>.
* Example use: the statement
* \code
* CellTopology customLine("customLine", 4);
* \endcode
* defines custom line with 4 nodes.
*/
CellTopology( const std::string & name,
const unsigned nodeCount);
/** \brief Construct custom 2-cell (polygon) from a list of edges.
* The default base topology is the specified custom cell topology.
* \param name [in] - descriptive name of the custom 2-cell
* \param vertex_count [in] - number of vertices in the custom 2-cell
* \param node_count [in] - number of nodes in the custom 2-cell
* \param edges [in] - raw CellTopologyData for each edge (can be different!)
* \param edge_node_map [in] - flat array with node maps for each edge
* \param base [in] - CellTopologyData of the base topology
*/
CellTopology( const std::string & name,
const unsigned vertex_count,
const unsigned node_count,
const std::vector< const CellTopologyData * > & edges ,
const std::vector< unsigned > & edge_node_map ,
const CellTopologyData * base = NULL );
/** \brief Construct custom 3-cell (polyhedron) from a list of edges and sides.
* The default base topology is the specified custom cell topology.
* \param name [in] - descriptive name of the custom 3-cell
* \param vertex_count [in] - number of vertices in the custom 3-cell
* \param node_count [in] - number of nodes in the custom 3-cell
* \param edges [in] - raw CellTopologyData for each edge (can be different!)
* \param edge_node_map [in] - flat array with node maps for each edge
* \param faces [in] - raw CellTopologyData for each face (can be different!)
* \param face_node_map [in] - flat array with node maps for each face
* \param base [in] - CellTopologyData of the base topology
*/
CellTopology( const std::string & name,
const unsigned vertex_count,
const unsigned node_count,
const std::vector< const CellTopologyData * > & edges ,
const std::vector< unsigned > & edge_node_map ,
const std::vector< const CellTopologyData * > & faces ,
const std::vector< unsigned > & face_node_map ,
const CellTopologyData * base = NULL );
/** \brief Assignment operator <var>*this = right</var>. */
CellTopology& operator = (const CellTopology& right);
/** \brief Copy constructor */
CellTopology( const CellTopology& right );
/** \brief Default constructor initializes to NULL */
CellTopology();
/** \brief Destructor */
~CellTopology();
/** \} */
}; // class CellTopology
/*------------------------------------------------------------------------*/
/* \brief Find the permutation from the expected nodes to the actual nodes,
*
* Find permutation 'p' such that:
* actual_node[j] == expected_node[ top.permutation[p].node[j] ]
* for all vertices.
*/
template< typename id_type >
int findPermutation( const CellTopologyData & top ,
const id_type * const expected_node ,
const id_type * const actual_node )
{
const int nv = top.vertex_count ;
const int np = top.permutation_count ;
int p = 0 ;
for ( ; p < np ; ++p ) {
const unsigned * const perm_node = top.permutation[p].node ;
int j = 0 ;
for ( ; j < nv && actual_node[j] == expected_node[ perm_node[j] ] ; ++j );
if ( nv == j ) break ;
}
if ( np == p ) p = -1 ;
return p ;
}
template< typename id_type >
int findPermutation( const CellTopology & top ,
const id_type * const expected_node ,
const id_type * const actual_node )
{
return findPermutation( * top.getCellTopologyData() , expected_node , actual_node );
}
/*------------------------------------------------------------------------*/
/** \brief Generates detailed message if one or more input parameters are
* out of their admissible bounds.
* \param dimension [in] - maximum value = 7
* \param face_count [in] - maximum value = 63
* \param edge_count [in] - maximum value = 63
* \param vertex_count [in] - maximum value = 63
* \param node_count [in] - maximum value = 1023
*
*/
void badCellTopologyKey( const unsigned dimension ,
const unsigned face_count ,
const unsigned edge_count ,
const unsigned vertex_count ,
const unsigned node_count );
/** \brief Generate integer key from topological dimensions
* \param dimension [in] - maximum value = 7 (3 bits)
* \param face_count [in] - maximum value = 63 (6 bits)
* \param edge_count [in] - maximum value = 63 (6 bits)
* \param vertex_count [in] - maximum value = 63 (6 bits)
* \param node_count [in] - maximum value = 1023 (10 bits)
* The key uses all but the first bit in a 32 bit unsigned.
*/
inline
unsigned cellTopologyKey( const unsigned dimension ,
const unsigned face_count ,
const unsigned edge_count ,
const unsigned vertex_count ,
const unsigned node_count )
{
const bool bad = ( dimension >> 3 ) ||
( face_count >> 6 ) ||
( edge_count >> 6 ) ||
( vertex_count >> 6 ) ||
( node_count >> 10 );
if ( bad ) {
badCellTopologyKey( dimension ,
face_count ,
edge_count ,
vertex_count ,
node_count );
}
const unsigned key = ( dimension << 28 ) |
( face_count << 22 ) |
( edge_count << 16 ) |
( vertex_count << 10 ) |
( node_count ) ;
return key ;
}
inline
bool operator==(const CellTopology &left, const CellTopology &right)
{
return left.getCellTopologyData() == right.getCellTopologyData();
}
inline
bool operator<(const CellTopology &left, const CellTopology &right)
{
return left.getCellTopologyData() < right.getCellTopologyData();
// FIXME: Should is be this?
// return left.getKey() < right.getKey();
}
inline
bool operator!=(const CellTopology &left, const CellTopology &right) {
return !(left == right);
}
/** \} */
} // namespace shards
#undef SHARDS_REQUIRE
#endif // Shards_CellTopology_hpp
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