This file is indexed.

/usr/include/trilinos/Rythmos_TimeStepNonlinearSolver_decl.hpp is in libtrilinos-rythmos-dev 12.12.1-5.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
//@HEADER
// ***********************************************************************
//
//                           Rythmos Package
//                 Copyright (2006) Sandia Corporation
//
// Under terms of Contract DE-AC04-94AL85000, there is a non-exclusive
// license for use of this work by or on behalf of the U.S. Government.
//
// This library is free software; you can redistribute it and/or modify
// it under the terms of the GNU Lesser General Public License as
// published by the Free Software Foundation; either version 2.1 of the
// License, or (at your option) any later version.
//
// This library is distributed in the hope that it will be useful, but
// WITHOUT ANY WARRANTY; without even the implied warranty of
// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
// Lesser General Public License for more details.
//
// You should have received a copy of the GNU Lesser General Public
// License along with this library; if not, write to the Free Software
// Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301
// USA
// Questions? Contact Todd S. Coffey (tscoffe@sandia.gov)
//
// ***********************************************************************
//@HEADER


#ifndef RYTHMOS_TIME_STEP_NONLINEAR_SOLVER_DECL_HPP
#define RYTHMOS_TIME_STEP_NONLINEAR_SOLVER_DECL_HPP

#include "Rythmos_Types.hpp"
#include "Thyra_NonlinearSolverBase.hpp"

namespace Rythmos {


/** \brief Simple undampended Newton solver designed to solve time step
 * equations in accurate times-tepping methods.
 * 
 * ToDo: Finish documentation.
 *
 * 2007/05/18: rabartl: ToDo: Derive NonlinearSolverBase from
 * ParameterListAcceptor and accept options through a validated
 * parameter list!  Then remove these STANDARD_MEMBER_COMPOSITION_MEMBERS()
 * macros.
 */
template <class Scalar>
class TimeStepNonlinearSolver : public Thyra::NonlinearSolverBase<Scalar> {
public:

  /** \brief. */
  typedef Teuchos::ScalarTraits<Scalar> ST;
  /** \brief. */
  typedef typename ST::magnitudeType ScalarMag;
  /** \brief. */
  typedef Teuchos::ScalarTraits<ScalarMag> SMT;

  /** @name Constructors/Intializers/Misc */
  //@{

  /** \brief Sets parameter defaults . */
  TimeStepNonlinearSolver();

  //@}

  /** @name Overridden from ParameterListAcceptor */
  //@{

  /** \brief . */
  void setParameterList(RCP<ParameterList> const& paramList);
  /** \brief . */
  RCP<ParameterList> getNonconstParameterList();
  /** \brief . */
  RCP<ParameterList> unsetParameterList();
  /** \brief . */
  RCP<const ParameterList> getParameterList() const;
  /** \brief . */
  RCP<const ParameterList> getValidParameters() const;

  //@}

  /** @name Overridden from NonlinearSolverBase */
  //@{

  /** \brief . */
  void setModel(
    const RCP<const Thyra::ModelEvaluator<Scalar> > &model
    );
  /** \brief . */
  RCP<const Thyra::ModelEvaluator<Scalar> > getModel() const;
  /** \brief . */
  Thyra::SolveStatus<Scalar> solve(
    Thyra::VectorBase<Scalar> *x,
    const Thyra::SolveCriteria<Scalar> *solveCriteria,
    Thyra::VectorBase<Scalar> *delta = NULL
    );
  /** \brief . */
  bool supportsCloning() const;
  /** \brief . */
  RCP<Thyra::NonlinearSolverBase<Scalar> >
  cloneNonlinearSolver() const;  
  /** \brief . */
  RCP<const Thyra::VectorBase<Scalar> > get_current_x() const;
  /** \brief . */
  bool is_W_current() const;
  /** \brief . */
  RCP<Thyra::LinearOpWithSolveBase<Scalar> >
  get_nonconst_W(const bool forceUpToDate);
  /** \brief . */
  RCP<const Thyra::LinearOpWithSolveBase<Scalar> > get_W() const;
  /** \brief . */
  void set_W_is_current(bool W_is_current);

  //@}

private:

  // private object data members

  RCP<ParameterList> paramList_;
  RCP<const Thyra::ModelEvaluator<Scalar> > model_;
  RCP<Thyra::LinearOpWithSolveBase<Scalar> > J_;
  RCP<Thyra::VectorBase<Scalar> > current_x_;
  bool J_is_current_;

  double defaultTol_;
  int defaultMaxIters_;
  double nonlinearSafetyFactor_;
  double linearSafetyFactor_;
  double RMinFraction_;
  bool throwOnLinearSolveFailure_;

  // static class data members

  static const std::string DefaultTol_name_;
  static const double DefaultTol_default_;

  static const std::string DefaultMaxIters_name_;
  static const int DefaultMaxIters_default_;

  static const std::string NonlinearSafetyFactor_name_;
  static const double NonlinearSafetyFactor_default_;

  static const std::string LinearSafetyFactor_name_;
  static const double LinearSafetyFactor_default_;

  static const std::string RMinFraction_name_;
  static const double RMinFraction_default_;

  static const std::string ThrownOnLinearSolveFailure_name_;
  static const bool ThrownOnLinearSolveFailure_default_;

};


/** \brief Nonmember constructor.
 *
 * \relates TimeStepNonlinearSolver
 */
template <class Scalar>
RCP<TimeStepNonlinearSolver<Scalar> > timeStepNonlinearSolver();


/** \brief Nonmember constructor.
 *
 * \relates TimeStepNonlinearSolver
 */
template <class Scalar>
RCP<TimeStepNonlinearSolver<Scalar> >
timeStepNonlinearSolver(const RCP<ParameterList> &pl);

} // namespace Rythmos


#endif // RYTHMOS_TIME_STEP_NONLINEAR_SOLVER_DECL_HPP