This file is indexed.

/usr/include/trilinos/Ifpack_Utils.h is in libtrilinos-ifpack-dev 12.12.1-5.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
/*@HEADER
// ***********************************************************************
//
//       Ifpack: Object-Oriented Algebraic Preconditioner Package
//                 Copyright (2002) Sandia Corporation
//
// Under terms of Contract DE-AC04-94AL85000, there is a non-exclusive
// license for use of this work by or on behalf of the U.S. Government.
//
// Redistribution and use in source and binary forms, with or without
// modification, are permitted provided that the following conditions are
// met:
//
// 1. Redistributions of source code must retain the above copyright
// notice, this list of conditions and the following disclaimer.
//
// 2. Redistributions in binary form must reproduce the above copyright
// notice, this list of conditions and the following disclaimer in the
// documentation and/or other materials provided with the distribution.
//
// 3. Neither the name of the Corporation nor the names of the
// contributors may be used to endorse or promote products derived from
// this software without specific prior written permission.
//
// THIS SOFTWARE IS PROVIDED BY SANDIA CORPORATION "AS IS" AND ANY
// EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
// PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL SANDIA CORPORATION OR THE
// CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
// PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
// LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
// NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
// SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
//
// Questions? Contact Michael A. Heroux (maherou@sandia.gov)
//
// ***********************************************************************
//@HEADER
*/

#ifndef IFPACK_UTILS_H
#define IFPACK_UTILS_H

#include "Ifpack_ConfigDefs.h"
#include "Epetra_Comm.h"
#if !( defined(_WIN32) )
#  include "unistd.h" // Not a standard header file!
#endif
class Epetra_RowMatrix;
class Epetra_CrsMatrix;
class Epetra_CrsGraph;
class Epetra_RowMatrix;
class Epetra_MultiVector;
class Epetra_Vector;

/*! \file Ifpack_Utils.h
 */

//! Prints a line of `=' on cout
void Ifpack_PrintLine();

//! Stops the execution of code, so that a debugger can be attached.
void Ifpack_BreakForDebugger(Epetra_Comm& Comm);

//! Creates an overlapping Epetra_CrsMatrix. Returns 0 if OverlappingLevel is 0.
Epetra_CrsMatrix* Ifpack_CreateOverlappingCrsMatrix(const Epetra_RowMatrix* Matrix,
                                                    const int OverlappingLevel);

//! Creates an overlapping Epetra_CrsGraph. Returns 0 if OverlappingLevel is 0.
Epetra_CrsGraph* Ifpack_CreateOverlappingCrsMatrix(const Epetra_CrsGraph* Graph,
                                                   const int OverlappingLevel);

//! Converts an integer to std::string.
std::string Ifpack_toString(const int& x);

//! Converts a double to std::string.
std::string Ifpack_toString(const double& x);

//! Prints on cout the true residual.
int Ifpack_PrintResidual(char* Label,  const Epetra_RowMatrix& A,
                         const Epetra_MultiVector& X, const Epetra_MultiVector&Y);

int Ifpack_PrintResidual(const int iter, const Epetra_RowMatrix& A,
                         const Epetra_MultiVector& X, const Epetra_MultiVector&Y);

void Ifpack_PrintSparsity_Simple(const Epetra_RowMatrix& A);

//! Analyzes the basic properties of the input matrix A; see \ref ifp_analyze.
int Ifpack_Analyze(const Epetra_RowMatrix& A, const bool Cheap = false,
                   const int NumPDEEqns = 1);

//! Analyzes the distribution of values of the input matrix A.
/*!
 \param A - (In) matrix to be analyzed.
 \param abs - (In) if \c true, the function will analyze matrix
              B, whose elements are defined as \f$ B_{i,i} = | A_{i,i}| \f$.
 \param steps - (In) number of intervals for the analysis.

 An example of output is reported \ref ifp_matrix.
 */
int Ifpack_AnalyzeMatrixElements(const Epetra_RowMatrix& A,
                                 const bool abs = false,
                                 const int steps = 10);

//! Analyzes the distribution of values of the input vector Diagonal.
/*!
 \param Diagonal - (In) Vector to be analyzed.
 \param abs - (In) if \c true, the function will analyze vector
              B, whose elements are defined as \f$ B_{i} = | D_{i}| \f$.
 \param steps - (In) number of intervals for the analysis.

 An example of output is reported \ref ifp_vector.
 */
int Ifpack_AnalyzeVectorElements(const Epetra_Vector& Diagonal,
                                 const bool abs = false,
                                 const int steps = 10);

//! Plots the sparsity pattern of an Epetra_RowMatrix into a PS file.
/*!
 \param A (In) - Epetra_RowMatrix whose sparsity pattern will be plotted.

 \param FileName (In) - char std::string containing the filename.
                        If 0, then the matrix label is used as file name,
                        after appending .ps.

 \param NumPDEEqns (In) - number of PDE equations. The function will plot
               the block structure of the matrix if NumPDEEqns > 1

 \name Largely inspired from Yousef Saad's SPARSKIT plot function.
 */
int Ifpack_PrintSparsity(const Epetra_RowMatrix& A, const char* FileName = 0,
                         const int NumPDEEqns = 1);

//==============================================================================
class Ifpack_Element {

public:
  Ifpack_Element() {};

  Ifpack_Element(const Ifpack_Element& rhs) {
    i_ = rhs.Index();
    val_ = rhs.Value();
    aval_ = rhs.AbsValue();
  }

  inline int Index() const {
    return(i_);
  }

  inline double Value() const {
    return(val_);
  }

  inline double AbsValue() const {
    return(aval_);
  }

  inline void SetIndex(const int i)
  {
    i_ = i;
  }

  inline void SetValue(const double val)
  {
    val_ = val;
    aval_ = IFPACK_ABS(val_);
  }

  inline bool operator <(const Ifpack_Element& rhs) const
  {
    if (rhs.AbsValue() > AbsValue())
      return(false);
    else if (rhs.AbsValue() < AbsValue())
      return(true);
    else if (rhs.Index() < Index())
        return(true);
    return(false);
  }

private:
  int i_;
  double val_;
  double aval_;

};

#endif // IFPACK_UTILS_H