/usr/include/trilinos/Amesos2_TpetraMultiVecAdapter_def.hpp is in libtrilinos-amesos2-dev 12.12.1-5.
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//
// ***********************************************************************
//
// Amesos2: Templated Direct Sparse Solver Package
// Copyright 2011 Sandia Corporation
//
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/**
\file Amesos2_TpetraMultiVecAdapter_def.hpp
\author Eric T Bavier <etbavier@sandia.gov>
\date Wed May 26 19:48:32 CDT 2010
\brief Amesos2::MultiVecAdapter specialization for the
Tpetra::MultiVector class.
*/
#ifndef AMESOS2_TPETRA_MULTIVEC_ADAPTER_DEF_HPP
#define AMESOS2_TPETRA_MULTIVEC_ADAPTER_DEF_HPP
#include "Amesos2_TpetraMultiVecAdapter_decl.hpp"
namespace Amesos2 {
using Tpetra::MultiVector;
template <typename Scalar, typename LocalOrdinal, typename GlobalOrdinal, class Node >
MultiVecAdapter<
MultiVector<Scalar,
LocalOrdinal,
GlobalOrdinal,
Node> >::MultiVecAdapter( const Teuchos::RCP<multivec_t>& m )
: mv_(m)
{}
template <typename Scalar, typename LocalOrdinal, typename GlobalOrdinal, class Node >
typename MultiVecAdapter<
MultiVector<Scalar,
LocalOrdinal,
GlobalOrdinal,
Node> >::multivec_t::impl_scalar_type *
MultiVecAdapter<
MultiVector<Scalar,
LocalOrdinal,
GlobalOrdinal,
Node> >::getMVPointer_impl() const
{
TEUCHOS_TEST_FOR_EXCEPTION( this->getGlobalNumVectors() != 1,
std::invalid_argument,
"Amesos2_TpetraMultiVectorAdapter: getMVPointer_impl should only be called for case with a single vector and single MPI process" );
typedef typename multivec_t::dual_view_type dual_view_type;
typedef typename dual_view_type::host_mirror_space host_execution_space;
mv_->template sync<host_execution_space> ();
auto contig_local_view_2d = mv_->template getLocalView<host_execution_space>();
auto contig_local_view_1d = Kokkos::subview (contig_local_view_2d, Kokkos::ALL (), 0);
return contig_local_view_1d.data();
}
// TODO Proper type handling:
// Consider a MultiVectorTraits class
// typedef Tpetra::MultiVector<Scalar, LocalOrdinal, GlobalOrdinal, Node> multivector_type
// NOTE: In this class, above already has a typedef multivec_t
// typedef typename multivector_type::impl_scalar_type return_scalar_type; // this is the POD type the dual_view_type is templated on
// Traits class needed to do this generically for the general MultiVectorAdapter interface
template <typename Scalar, typename LocalOrdinal, typename GlobalOrdinal, class Node >
void
MultiVecAdapter<
MultiVector<Scalar,
LocalOrdinal,
GlobalOrdinal,
Node> >::get1dCopy(const Teuchos::ArrayView<scalar_t>& av,
size_t lda,
Teuchos::Ptr<
const Tpetra::Map<LocalOrdinal,
GlobalOrdinal,
Node> > distribution_map,
EDistribution distribution) const
{
using Teuchos::as;
using Teuchos::RCP;
typedef Tpetra::Map<LocalOrdinal, GlobalOrdinal, Node> map_type;
const size_t num_vecs = getGlobalNumVectors ();
TEUCHOS_TEST_FOR_EXCEPTION(
distribution_map.getRawPtr () == NULL, std::invalid_argument,
"Amesos2::MultiVecAdapter::get1dCopy: distribution_map argument is null.");
TEUCHOS_TEST_FOR_EXCEPTION(
mv_.is_null (), std::logic_error,
"Amesos2::MultiVecAdapter::get1dCopy: mv_ is null.");
// Check mv_ before getMap(), because the latter calls mv_->getMap().
TEUCHOS_TEST_FOR_EXCEPTION(
this->getMap ().is_null (), std::logic_error,
"Amesos2::MultiVecAdapter::get1dCopy: this->getMap() returns null.");
#ifdef HAVE_AMESOS2_DEBUG
const size_t requested_vector_length = distribution_map->getNodeNumElements ();
TEUCHOS_TEST_FOR_EXCEPTION(
lda < requested_vector_length, std::invalid_argument,
"Amesos2::MultiVecAdapter::get1dCopy: On process " <<
distribution_map->getComm ()->getRank () << " of the distribution Map's "
"communicator, the given stride lda = " << lda << " is not large enough "
"for the local vector length " << requested_vector_length << ".");
TEUCHOS_TEST_FOR_EXCEPTION(
as<size_t> (av.size ()) < as<size_t> ((num_vecs - 1) * lda + requested_vector_length),
std::invalid_argument, "Amesos2::MultiVector::get1dCopy: MultiVector "
"storage not large enough given leading dimension and number of vectors." );
#endif // HAVE_AMESOS2_DEBUG
// Special case when number vectors == 1 and single MPI process
if ( num_vecs == 1 && this->getComm()->getRank() == 0 && this->getComm()->getSize() == 1 ) {
mv_->get1dCopy (av, lda);
}
else {
// (Re)compute the Export object if necessary. If not, then we
// don't need to clone distribution_map; we can instead just get
// the previously cloned target Map from the Export object.
RCP<const map_type> distMap;
if (exporter_.is_null () ||
! exporter_->getSourceMap ()->isSameAs (* (this->getMap ())) ||
! exporter_->getTargetMap ()->isSameAs (* distribution_map)) {
// Since we're caching the Export object, and since the Export
// needs to keep the distribution Map, we have to make a copy of
// the latter in order to ensure that it will stick around past
// the scope of this function call. (Ptr is not reference
// counted.) Map's clone() method suffices, even though it only
// makes a shallow copy of some of Map's data, because Map is
// immutable and those data are reference-counted (e.g.,
// ArrayRCP or RCP).
distMap = distribution_map->template clone<Node> (distribution_map->getNode ());
// (Re)create the Export object.
exporter_ = rcp (new export_type (this->getMap (), distMap));
}
else {
distMap = exporter_->getTargetMap ();
}
multivec_t redist_mv (distMap, num_vecs);
// Redistribute the input (multi)vector.
redist_mv.doExport (*mv_, *exporter_, Tpetra::REPLACE);
if ( distribution != CONTIGUOUS_AND_ROOTED ) {
// Do this if GIDs contiguous - existing functionality
// Copy the imported (multi)vector's data into the ArrayView.
redist_mv.get1dCopy (av, lda);
}
else {
// Do this if GIDs not contiguous...
// sync is needed for example if mv was updated on device, but will be passed through Amesos2 to solver running on host
typedef typename multivec_t::dual_view_type dual_view_type;
typedef typename dual_view_type::host_mirror_space host_execution_space;
redist_mv.template sync < host_execution_space > ();
auto contig_local_view_2d = redist_mv.template getLocalView<host_execution_space>();
if ( redist_mv.isConstantStride() ) {
for ( size_t j = 0; j < num_vecs; ++j) {
auto av_j = av(lda*j, lda);
for ( size_t i = 0; i < lda; ++i ) {
av_j[i] = contig_local_view_2d(i,j); //lda may not be correct if redist_mv is not constant stride...
}
}
}
else {
// ... lda should come from Teuchos::Array* allocation,
// not the MultiVector, since the MultiVector does NOT
// have constant stride in this case.
// TODO lda comes from X->getGlobalLength() in solve_impl - should this be changed???
const size_t lclNumRows = redist_mv.getLocalLength();
for (size_t j = 0; j < redist_mv.getNumVectors(); ++j) {
auto av_j = av(lda*j, lclNumRows);
auto X_j = redist_mv.getVector(j);
auto X_lcl_j_2d = redist_mv.template getLocalView<host_execution_space> ();
auto X_lcl_j_1d = Kokkos::subview (X_lcl_j_2d, Kokkos::ALL (), j);
for ( size_t i = 0; i < lclNumRows; ++i ) {
av_j[i] = X_lcl_j_1d(i);
}
}
}
auto global_contiguous_size = distMap->getGlobalNumElements(); //maybe use getGlobalLength() from the mv
auto local_contiguous_size = (distMap->getComm()->getRank() == 0) ? global_contiguous_size : 0;
RCP<const map_type> contigMap = rcp( new map_type(global_contiguous_size, local_contiguous_size, 0, distMap->getComm() ));
typedef Tpetra::Export<local_ordinal_t, global_ordinal_t, node_t> contiguous_export_t;
RCP<contiguous_export_t> contig_exporter = rcp( new contiguous_export_t(redist_mv.getMap(), contigMap) );
multivec_t contig_mv( contigMap, num_vecs);
contig_mv.doExport(redist_mv, *contig_exporter, Tpetra::INSERT);
}
}
}
template <typename Scalar, typename LocalOrdinal, typename GlobalOrdinal, class Node >
Teuchos::ArrayRCP<Scalar>
MultiVecAdapter<
MultiVector<Scalar,
LocalOrdinal,
GlobalOrdinal,
Node> >::get1dViewNonConst (bool local)
{
// FIXME (mfh 22 Jan 2014) When I first found this routine, all of
// its code was commented out, and it didn't return anything. The
// latter is ESPECIALLY dangerous, given that the return value is
// an ArrayRCP. Thus, I added the exception throw below.
TEUCHOS_TEST_FOR_EXCEPTION(
true, std::logic_error, "Amesos2::MultiVecAdapter::get1dViewNonConst: "
"Not implemented.");
// if( local ){
// this->localize();
// /* Use the global element list returned by
// * mv_->getMap()->getNodeElementList() to get a subCopy of mv_ which we
// * assign to l_l_mv_, then return get1dViewNonConst() of l_l_mv_
// */
// if(l_l_mv_.is_null() ){
// Teuchos::ArrayView<const GlobalOrdinal> nodeElements_go
// = mv_->getMap()->getNodeElementList();
// Teuchos::Array<size_t> nodeElements_st(nodeElements_go.size());
// // Convert the node element to a list of size_t type objects
// typename Teuchos::ArrayView<const GlobalOrdinal>::iterator it_go;
// Teuchos::Array<size_t>::iterator it_st = nodeElements_st.begin();
// for( it_go = nodeElements_go.begin(); it_go != nodeElements_go.end(); ++it_go ){
// *(it_st++) = Teuchos::as<size_t>(*it_go);
// }
// // To be consistent with the globalize() function, get a view of the local mv
// l_l_mv_ = l_mv_->subViewNonConst(nodeElements_st);
// return(l_l_mv_->get1dViewNonConst());
// } else {
// // We need to re-import values to the local, since changes may have been
// // made to the global structure that are not reflected in the local
// // view.
// Teuchos::ArrayView<const GlobalOrdinal> nodeElements_go
// = mv_->getMap()->getNodeElementList();
// Teuchos::Array<size_t> nodeElements_st(nodeElements_go.size());
// // Convert the node element to a list of size_t type objects
// typename Teuchos::ArrayView<const GlobalOrdinal>::iterator it_go;
// Teuchos::Array<size_t>::iterator it_st = nodeElements_st.begin();
// for( it_go = nodeElements_go.begin(); it_go != nodeElements_go.end(); ++it_go ){
// *(it_st++) = Teuchos::as<size_t>(*it_go);
// }
// return l_l_mv_->get1dViewNonConst();
// }
// } else {
// if( mv_->isDistributed() ){
// this->localize();
// return l_mv_->get1dViewNonConst();
// } else { // not distributed, no need to import
// return mv_->get1dViewNonConst();
// }
// }
}
template <typename Scalar, typename LocalOrdinal, typename GlobalOrdinal, class Node>
void
MultiVecAdapter<
MultiVector<Scalar,
LocalOrdinal,
GlobalOrdinal,
Node> >::put1dData(const Teuchos::ArrayView<const scalar_t>& new_data,
size_t lda,
Teuchos::Ptr<
const Tpetra::Map<LocalOrdinal,
GlobalOrdinal,
Node> > source_map,
EDistribution distribution )
{
using Teuchos::RCP;
typedef Tpetra::Map<LocalOrdinal, GlobalOrdinal, Node> map_type;
TEUCHOS_TEST_FOR_EXCEPTION(
source_map.getRawPtr () == NULL, std::invalid_argument,
"Amesos2::MultiVecAdapter::put1dData: source_map argument is null.");
TEUCHOS_TEST_FOR_EXCEPTION(
mv_.is_null (), std::logic_error,
"Amesos2::MultiVecAdapter::put1dData: the internal MultiVector mv_ is null.");
// getMap() calls mv_->getMap(), so test first whether mv_ is null.
TEUCHOS_TEST_FOR_EXCEPTION(
this->getMap ().is_null (), std::logic_error,
"Amesos2::MultiVecAdapter::put1dData: this->getMap() returns null.");
const size_t num_vecs = getGlobalNumVectors ();
// Special case when number vectors == 1 and single MPI process
if ( num_vecs == 1 && this->getComm()->getRank() == 0 && this->getComm()->getSize() == 1 ) {
typedef typename multivec_t::dual_view_type::host_mirror_space host_execution_space;
// num_vecs = 1; stride does not matter
auto mv_view_to_modify_2d = mv_->template getLocalView<host_execution_space>();
for ( size_t i = 0; i < lda; ++i ) {
mv_view_to_modify_2d(i,0) = new_data[i];
}
}
else {
// (Re)compute the Import object if necessary. If not, then we
// don't need to clone source_map; we can instead just get the
// previously cloned source Map from the Import object.
RCP<const map_type> srcMap;
if (importer_.is_null () ||
! importer_->getSourceMap ()->isSameAs (* source_map) ||
! importer_->getTargetMap ()->isSameAs (* (this->getMap ()))) {
// Since we're caching the Import object, and since the Import
// needs to keep the source Map, we have to make a copy of the
// latter in order to ensure that it will stick around past the
// scope of this function call. (Ptr is not reference counted.)
// Map's clone() method suffices, even though it only makes a
// shallow copy of some of Map's data, because Map is immutable
// and those data are reference-counted (e.g., ArrayRCP or RCP).
srcMap = source_map->template clone<Node> (source_map->getNode ());
importer_ = rcp (new import_type (srcMap, this->getMap ()));
}
else {
srcMap = importer_->getSourceMap ();
}
multivec_t redist_mv (srcMap, num_vecs);
if ( distribution != CONTIGUOUS_AND_ROOTED ) {
// Do this if GIDs contiguous - existing functionality
// Redistribute the output (multi)vector.
const multivec_t source_mv (srcMap, new_data, lda, num_vecs);
mv_->doImport (source_mv, *importer_, Tpetra::REPLACE);
}
else {
typedef typename multivec_t::dual_view_type dual_view_type;
typedef typename dual_view_type::host_mirror_space host_execution_space;
redist_mv.template modify< host_execution_space > ();
if ( redist_mv.isConstantStride() ) {
auto contig_local_view_2d = redist_mv.template getLocalView<host_execution_space>();
for ( size_t j = 0; j < num_vecs; ++j) {
auto av_j = new_data(lda*j, lda);
for ( size_t i = 0; i < lda; ++i ) {
contig_local_view_2d(i,j) = av_j[i];
}
}
}
else {
// ... lda should come from Teuchos::Array* allocation,
// not the MultiVector, since the MultiVector does NOT
// have constant stride in this case.
// TODO lda comes from X->getGlobalLength() in solve_impl - should this be changed???
const size_t lclNumRows = redist_mv.getLocalLength();
for (size_t j = 0; j < redist_mv.getNumVectors(); ++j) {
auto av_j = new_data(lda*j, lclNumRows);
auto X_j = redist_mv.getVector(j);
auto X_lcl_j_2d = redist_mv.template getLocalView<host_execution_space> ();
auto X_lcl_j_1d = Kokkos::subview (X_lcl_j_2d, Kokkos::ALL (), j);
for ( size_t i = 0; i < lclNumRows; ++i ) {
X_lcl_j_1d(i) = av_j[i];
}
}
}
typedef typename multivec_t::node_type::memory_space memory_space;
redist_mv.template sync <memory_space> ();
mv_->doImport (redist_mv, *importer_, Tpetra::REPLACE);
}
}
}
template <typename Scalar, typename LocalOrdinal, typename GlobalOrdinal, class Node >
std::string
MultiVecAdapter<
MultiVector<Scalar,
LocalOrdinal,
GlobalOrdinal,
Node> >::description() const
{
std::ostringstream oss;
oss << "Amesos2 adapter wrapping: ";
oss << mv_->description();
return oss.str();
}
template <typename Scalar, typename LocalOrdinal, typename GlobalOrdinal, class Node >
void
MultiVecAdapter<
MultiVector<Scalar,
LocalOrdinal,
GlobalOrdinal,
Node> >::describe (Teuchos::FancyOStream& os,
const Teuchos::EVerbosityLevel verbLevel) const
{
mv_->describe (os, verbLevel);
}
template <typename Scalar, typename LocalOrdinal, typename GlobalOrdinal, class Node >
const char* MultiVecAdapter<
MultiVector<Scalar,
LocalOrdinal,
GlobalOrdinal,
Node> >::name = "Amesos2 adapter for Tpetra::MultiVector";
} // end namespace Amesos2
#endif // AMESOS2_TPETRA_MULTIVEC_ADAPTER_DEF_HPP
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