/usr/include/TiledArray/math/transpose.h is in libtiledarray-dev 0.6.0-5.
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* This file is a part of TiledArray.
* Copyright (C) 2014 Virginia Tech
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with this program. If not, see <http://www.gnu.org/licenses/>.
*
* Justus Calvin
* Department of Chemistry, Virginia Tech
*
* transpose.h
* Jun 9, 2014
*
*/
#ifndef TILEDARRAY_MATH_TRANSPOSE_H__INCLUDED
#define TILEDARRAY_MATH_TRANSPOSE_H__INCLUDED
#include <TiledArray/error.h>
#include <TiledArray/math/vector_op.h>
namespace TiledArray {
namespace math {
/// Partial transpose algorithm automatic loop unwinding
/// \tparam N The number of steps to unwind
template <std::size_t N> class TransposeUnwind;
template <>
class TransposeUnwind<0> {
public:
static constexpr std::size_t offset = TILEDARRAY_LOOP_UNWIND - 1;
template <typename Op, typename Result, typename... Args>
static TILEDARRAY_FORCE_INLINE void
gather_trans(Op&& op, Result* restrict const result,
const std::size_t arg_stride, const Args* restrict const... args)
{
// Load arg block
Block<Result> result_block;
for_each_block(op, result_block, Block<Args>(args)...);
// Transpose arg_block
result_block.scatter_to(result, TILEDARRAY_LOOP_UNWIND);
}
template <typename Op, typename Result>
static TILEDARRAY_FORCE_INLINE void
block_scatter(Op&& op, Result* const result, const Result* const arg,
const std::size_t /*result_stride*/)
{
for_each_block_ptr(op, result, arg);
}
}; // class TransposeUnwind<0>
template <std::size_t N>
class TransposeUnwind : public TransposeUnwind<N - 1> {
public:
typedef TransposeUnwind<N - 1> TransposeUnwindN1;
static constexpr std::size_t offset = TILEDARRAY_LOOP_UNWIND - N - 1;
template <typename Op, typename Result, typename... Args>
static TILEDARRAY_FORCE_INLINE void
gather_trans(Op&& op, Result* restrict const result,
const std::size_t arg_stride, const Args* restrict const... args)
{
{
// Load arg block
Block<Result> result_block;
for_each_block(op, result_block, Block<Args>(args)...);
// Transpose arg_block
result_block.scatter_to(result, TILEDARRAY_LOOP_UNWIND);
}
TransposeUnwindN1::gather_trans(op, result + 1,
arg_stride, (args + arg_stride)...);
}
template <typename Op, typename Result>
static TILEDARRAY_FORCE_INLINE void
block_scatter(Op&& op, Result* const result, const Result* const arg,
const std::size_t result_stride)
{
for_each_block_ptr(op, result, arg);
TransposeUnwindN1::block_scatter(op, result + result_stride,
arg + TILEDARRAY_LOOP_UNWIND, result_stride);
}
}; // class TransposeUnwind
// Convenience typedef
typedef TransposeUnwind<TILEDARRAY_LOOP_UNWIND - 1> TransposeUnwindN;
template <typename InputOp, typename OutputOp, typename Result, typename... Args>
TILEDARRAY_FORCE_INLINE void
transpose_block(InputOp&& input_op, OutputOp&& output_op,
const std::size_t result_stride, Result* const result,
const std::size_t arg_stride, const Args* const... args)
{
constexpr std::size_t block_size = TILEDARRAY_LOOP_UNWIND * TILEDARRAY_LOOP_UNWIND;
TILEDARRAY_ALIGNED_STORAGE Result temp[block_size];
// Transpose block
TransposeUnwindN::gather_trans(input_op, temp,
arg_stride, args...);
TransposeUnwindN::block_scatter(output_op, result,
temp, result_stride);
}
template <typename InputOp, typename OutputOp, typename Result, typename... Args>
TILEDARRAY_FORCE_INLINE void
transpose_block(InputOp&& input_op, OutputOp&& output_op,
const std::size_t m, const std::size_t n,
const std::size_t result_stride, Result* restrict const result,
const std::size_t arg_stride, const Args* restrict const... args)
{
TA_ASSERT(m <= TILEDARRAY_LOOP_UNWIND);
TA_ASSERT(n <= TILEDARRAY_LOOP_UNWIND);
constexpr std::size_t block_size = TILEDARRAY_LOOP_UNWIND * TILEDARRAY_LOOP_UNWIND;
TILEDARRAY_ALIGNED_STORAGE Result temp[block_size];
// Copy and transpose arg data into temp block
for(std::size_t i = 0ul; i < m; ++i) {
std::size_t offset = i * arg_stride;
for(std::size_t j = 0ul, x = i; j < n; ++j, x += TILEDARRAY_LOOP_UNWIND, ++offset)
input_op(temp[x], args[offset]...);
}
// Copy the temp block into result
for(std::size_t j = 0ul; j < n; ++j) {
Result* restrict const result_j = result + (j * result_stride);
const Result* restrict const temp_j = temp + (j * TILEDARRAY_LOOP_UNWIND);
for(std::size_t i = 0ul; i < m; ++i)
output_op(result_j + i, temp_j[i]);
}
}
/// Matrix transpose and initialization
/// This function will transpose and transform argument matrices into an
/// uninitialized block of memory
/// \tparam InputOp The input transform operation type
/// \tparam OutputOp The output transform operation type
/// \tparam Result The result element type
/// \tparam Args The argument element type
/// \param[in] input_op The transformation operation applied to input arguments
/// \param[in] output_op The transformation operation used to set the result
/// \param[in] m The number of rows in the argument matrix
/// \param[in] n The number of columns in the argument matrix
/// \param[in] result_stride THe stride between result rows
/// \param[out] result A pointer to the first element of the result matrix
/// \param[in] arg_stride The stride between argument rows
/// \param[in] args A pointer to the first element of the argument matrix
/// \note The data layout is expected to be row-major.
template <typename InputOp, typename OutputOp, typename Result, typename... Args>
void transpose(InputOp&& input_op, OutputOp&& output_op,
const std::size_t m, const std::size_t n,
const std::size_t result_stride, Result* result,
const std::size_t arg_stride, const Args* const... args)
{
// Compute block iteration control variables
constexpr std::size_t index_mask = ~std::size_t(TILEDARRAY_LOOP_UNWIND - 1ul);
const std::size_t mx = m & index_mask; // = m - m % TILEDARRAY_LOOP_UNWIND
const std::size_t nx = n & index_mask; // = n - n % TILEDARRAY_LOOP_UNWIND
const std::size_t m_tail = m - mx;
const std::size_t n_tail = n - nx;
const std::size_t result_block_step = result_stride * TILEDARRAY_LOOP_UNWIND;
const std::size_t arg_block_step = arg_stride * TILEDARRAY_LOOP_UNWIND;
const std::size_t arg_end = mx * arg_stride;
const Result* result_end = result + (nx * result_stride);
const auto wrapper_input_op =
[&] (Result& res, param_type<Args>... a) { res = input_op(a...); };
// Iterate over block rows
std::size_t arg_start = 0;
for(; arg_start < arg_end; arg_start += arg_block_step, result += TILEDARRAY_LOOP_UNWIND) {
std::size_t arg_offset = arg_start;
Result* result_ij = result;
for(; result_ij < result_end; result_ij += result_block_step,
arg_offset += TILEDARRAY_LOOP_UNWIND)
transpose_block(wrapper_input_op, output_op, result_stride, result_ij,
arg_stride, (args + arg_offset)...);
if(n_tail)
transpose_block(wrapper_input_op, output_op, TILEDARRAY_LOOP_UNWIND,
n_tail, result_stride, result_ij, arg_stride, (args + arg_offset)...);
}
if(m_tail) {
std::size_t arg_offset = arg_start;
Result* result_ij = result;
for(; result_ij < result_end; result_ij += result_block_step,
arg_offset += TILEDARRAY_LOOP_UNWIND)
transpose_block(wrapper_input_op, output_op, m_tail,
TILEDARRAY_LOOP_UNWIND, result_stride, result_ij, arg_stride,
(args + arg_offset)...);
if(n_tail)
transpose_block(wrapper_input_op, output_op, m_tail, n_tail,
result_stride, result_ij, arg_stride, (args + arg_offset)...);
}
}
} // namespace math
} // namespace TiledArray
#endif // TILEDARRAY_MATH_TRANSPOSE_H__INCLUDED
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