/usr/include/tercpp/alignmentStruct.h is in libtercpp-dev 0.6.2+svn46-1.1build1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 | #ifndef __TERCPPALIGNMENTSTRUCT_H__
#define __TERCPPALIGNMENTSTRUCT_H__
#include <vector>
#include <stdio.h>
#include <string>
#include <sstream>
#include "tools.h"
using namespace std;
using namespace Tools;
namespace TERCpp
{
class alignmentStruct
{
private:
public:
// alignmentStruct();
// alignmentStruct (int _start, int _end, int _moveto, int _newloc);
// alignmentStruct (int _start, int _end, int _moveto, int _newloc, vector<string> _shifted);
// string toString();
// int distance() ;
// bool leftShift();
// int size();
// alignmentStruct operator=(alignmentStruct t);
// string vectorToString(vector<string> vec);
// int start;
// int end;
// int moveto;
// int newloc;
vector<string> nwords; // The words we shifted
vector<char> alignment ; // for pra_more output
vector<vecInt> aftershift; // for pra_more output
// This is used to store the cost of a shift, so we don't have to
// calculate it multiple times.
double cost;
string toString();
};
}
#endif
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