/usr/include/palabos/atomicBlock/dataField3D.h is in libplb-dev 1.5~r1+repack1-3.
This file is owned by root:root, with mode 0o644.
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*
* Copyright (C) 2011-2015 FlowKit Sarl
* Route d'Oron 2
* 1010 Lausanne, Switzerland
* E-mail contact: contact@flowkit.com
*
* The most recent release of Palabos can be downloaded at
* <http://www.palabos.org/>
*
* The library Palabos is free software: you can redistribute it and/or
* modify it under the terms of the GNU Affero General Public License as
* published by the Free Software Foundation, either version 3 of the
* License, or (at your option) any later version.
*
* The library is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU Affero General Public License for more details.
*
* You should have received a copy of the GNU Affero General Public License
* along with this program. If not, see <http://www.gnu.org/licenses/>.
*/
/** \file
* Serial implementation of scalar, vector and tensor fields for 3D data analysis.
* -- header file
*/
#ifndef DATA_FIELD_3D_H
#define DATA_FIELD_3D_H
#include "core/globalDefs.h"
#include "core/plbDebug.h"
#include "atomicBlock/dataField2D.h"
#include "core/dataFieldBase2D.h"
#include "core/dataFieldBase3D.h"
#include "atomicBlock/atomicBlock3D.h"
namespace plb {
template<typename T> class ScalarField3D;
template<typename T>
class ScalarFieldDataTransfer3D : public BlockDataTransfer3D {
public:
ScalarFieldDataTransfer3D(ScalarField3D<T>& field_);
virtual plint staticCellSize() const;
/// Send data from the block into a byte-stream.
virtual void send(Box3D domain, std::vector<char>& buffer, modif::ModifT kind) const;
/// Receive data from a byte-stream into the block.
virtual void receive(Box3D domain, std::vector<char> const& buffer, modif::ModifT kind );
virtual void receive(Box3D domain, std::vector<char> const& buffer, modif::ModifT kind, Dot3D absoluteOffset) {
receive(domain, buffer, kind);
}
virtual void receive(Box3D domain, std::vector<char> const& buffer,
modif::ModifT kind, std::map<int,std::string> const& foreignIds )
{
receive(domain, buffer, kind);
}
/// Attribute data between two blocks.
virtual void attribute(Box3D toDomain, plint deltaX, plint deltaY, plint deltaZ,
AtomicBlock3D const& from, modif::ModifT kind);
virtual void attribute(Box3D toDomain, plint deltaX, plint deltaY, plint deltaZ,
AtomicBlock3D const& from, modif::ModifT kind, Dot3D absoluteOffset)
{
attribute(toDomain, deltaX, deltaY, deltaZ, from, kind);
}
private:
ScalarField3D<T>& field;
};
template<typename T>
class ScalarField3D : public ScalarFieldBase3D<T>, public AtomicBlock3D {
public:
ScalarField3D(plint nx_, plint ny_, plint nz_, T iniVal=T());
~ScalarField3D();
ScalarField3D(ScalarField3D<T> const& rhs);
ScalarField3D<T>& operator=(ScalarField3D<T> const& rhs);
void swap(ScalarField3D<T>& rhs);
public:
virtual void reset();
virtual pluint getSize() const { return (pluint)this->getNx()*(pluint)this->getNy()*(pluint)this->getNz(); }
virtual T& get(plint iX, plint iY, plint iZ) {
PLB_PRECONDITION(iX>=0 && iX<this->getNx());
PLB_PRECONDITION(iY>=0 && iY<this->getNy());
PLB_PRECONDITION(iZ>=0 && iZ<this->getNz());
return field[iX][iY][iZ];
}
virtual T const& get(plint iX, plint iY, plint iZ) const {
PLB_PRECONDITION(iX>=0 && iX<this->getNx());
PLB_PRECONDITION(iY>=0 && iY<this->getNy());
PLB_PRECONDITION(iZ>=0 && iZ<this->getNz());
return field[iX][iY][iZ];
}
T& operator[] (plint ind) {
PLB_PRECONDITION(ind>=0 && ind<this->getNx()*this->getNy()*this->getNz());
return rawData[ind];
}
T const& operator[] (plint ind) const {
PLB_PRECONDITION(ind>=0 && ind<this->getNx()*this->getNy()*this->getNz());
return rawData[ind];
}
/// Get access to data transfer between blocks
virtual ScalarFieldDataTransfer3D<T>& getDataTransfer();
/// Get access to data transfer between blocks (const version)
virtual ScalarFieldDataTransfer3D<T> const& getDataTransfer() const;
private:
void allocateMemory();
void releaseMemory();
private:
T *rawData;
T ***field;
ScalarFieldDataTransfer3D<T> dataTransfer;
};
template<typename T, int nDim> class TensorField3D;
template<typename T, int nDim>
class TensorFieldDataTransfer3D : public BlockDataTransfer3D {
public:
TensorFieldDataTransfer3D(TensorField3D<T,nDim>& field_);
virtual plint staticCellSize() const;
/// Send data from the block into a byte-stream.
virtual void send(Box3D domain, std::vector<char>& buffer, modif::ModifT kind) const;
/// Receive data from a byte-stream into the block.
virtual void receive(Box3D domain, std::vector<char> const& buffer, modif::ModifT kind);
virtual void receive(Box3D domain, std::vector<char> const& buffer, modif::ModifT kind, Dot3D absoluteOffset) {
receive(domain, buffer, kind);
}
virtual void receive(Box3D domain, std::vector<char> const& buffer,
modif::ModifT kind, std::map<int,std::string> const& foreignIds )
{
receive(domain, buffer, kind);
}
/// Attribute data between two blocks.
virtual void attribute(Box3D toDomain, plint deltaX, plint deltaY, plint deltaZ,
AtomicBlock3D const& from, modif::ModifT kind);
virtual void attribute(Box3D toDomain, plint deltaX, plint deltaY, plint deltaZ,
AtomicBlock3D const& from, modif::ModifT kind, Dot3D absoluteOffset)
{
attribute(toDomain, deltaX, deltaY, deltaZ, from, kind);
}
private:
TensorField3D<T,nDim>& field;
};
template<typename T, int nDim>
class TensorField3D : public TensorFieldBase3D<T,nDim>, public AtomicBlock3D {
public:
TensorField3D(plint nx_, plint ny_, plint nz_);
TensorField3D(plint nx_, plint ny_, plint nz_, Array<T,nDim> const& iniVal);
~TensorField3D();
TensorField3D(TensorField3D<T,nDim> const& rhs);
TensorField3D<T,nDim>& operator=(TensorField3D<T,nDim> const& rhs);
void swap(TensorField3D<T,nDim>& rhs);
public:
virtual void reset();
virtual Array<T,nDim>& get(plint iX, plint iY, plint iZ) {
PLB_PRECONDITION(iX>=0 && iX<this->getNx());
PLB_PRECONDITION(iY>=0 && iY<this->getNy());
PLB_PRECONDITION(iZ>=0 && iZ<this->getNz());
return field[iX][iY][iZ];
}
virtual Array<T,nDim> const& get(plint iX, plint iY, plint iZ) const {
PLB_PRECONDITION(iX>=0 && iX<this->getNx());
PLB_PRECONDITION(iY>=0 && iY<this->getNy());
PLB_PRECONDITION(iZ>=0 && iZ<this->getNz());
return field[iX][iY][iZ];
}
Array<T,nDim>& operator[] (plint ind) {
PLB_PRECONDITION(ind>=0 && ind<this->getNx()*this->getNy()*this->getNz());
return rawData[ind];
}
Array<T,nDim> const& operator[] (plint ind) const {
PLB_PRECONDITION(ind>=0 && ind<this->getNx()*this->getNy()*this->getNz());
return rawData[ind];
}
/// Get access to data transfer between blocks
virtual TensorFieldDataTransfer3D<T,nDim>& getDataTransfer();
/// Get access to data transfer between blocks (const version)
virtual TensorFieldDataTransfer3D<T,nDim> const& getDataTransfer() const;
private:
void allocateMemory();
void releaseMemory();
private:
Array<T,nDim> *rawData;
Array<T,nDim> ***field;
TensorFieldDataTransfer3D<T,nDim> dataTransfer;
};
template<typename T> class NTensorField3D;
template<typename T>
class NTensorFieldDataTransfer3D : public BlockDataTransfer3D {
public:
NTensorFieldDataTransfer3D(NTensorField3D<T>& field_);
virtual plint staticCellSize() const;
/// Send data from the block into a byte-stream.
virtual void send(Box3D domain, std::vector<char>& buffer, modif::ModifT kind) const;
/// Receive data from a byte-stream into the block.
virtual void receive(Box3D domain, std::vector<char> const& buffer, modif::ModifT kind);
virtual void receive(Box3D domain, std::vector<char> const& buffer, modif::ModifT kind, Dot3D absoluteOffset) {
receive(domain, buffer, kind);
}
virtual void receive(Box3D domain, std::vector<char> const& buffer,
modif::ModifT kind, std::map<int,std::string> const& foreignIds )
{
receive(domain, buffer, kind);
}
/// Attribute data between two blocks.
virtual void attribute(Box3D toDomain, plint deltaX, plint deltaY, plint deltaZ,
AtomicBlock3D const& from, modif::ModifT kind);
virtual void attribute(Box3D toDomain, plint deltaX, plint deltaY, plint deltaZ,
AtomicBlock3D const& from, modif::ModifT kind, Dot3D absoluteOffset)
{
attribute(toDomain, deltaX, deltaY, deltaZ, from, kind);
}
private:
NTensorField3D<T>& field;
};
template<typename T>
class NTensorField3D : public NTensorFieldBase3D<T>, public AtomicBlock3D {
public:
NTensorField3D(plint nx_, plint ny_, plint nz_, plint ndim_);
NTensorField3D(plint nx_, plint ny_, plint nz_, plint ndim_, T const* iniVal);
~NTensorField3D();
NTensorField3D(NTensorField3D<T> const& rhs);
NTensorField3D<T>& operator=(NTensorField3D<T> const& rhs);
void swap(NTensorField3D<T>& rhs);
public:
virtual void reset();
virtual T* get(plint iX, plint iY, plint iZ) {
PLB_PRECONDITION(iX>=0 && iX<this->getNx());
PLB_PRECONDITION(iY>=0 && iY<this->getNy());
PLB_PRECONDITION(iZ>=0 && iZ<this->getNz());
return field[iX][iY][iZ];
}
virtual T const* get(plint iX, plint iY, plint iZ) const {
PLB_PRECONDITION(iX>=0 && iX<this->getNx());
PLB_PRECONDITION(iY>=0 && iY<this->getNy());
PLB_PRECONDITION(iZ>=0 && iZ<this->getNz());
return field[iX][iY][iZ];
}
T& operator[] (plint ind) {
PLB_PRECONDITION(ind>=0 && ind<this->getNx()*this->getNy()*this->getNz()*this->getNdim());
return rawData[ind];
}
T const& operator[] (plint ind) const {
PLB_PRECONDITION(ind>=0 && ind<this->getNx()*this->getNy()*this->getNz()*this->getNdim());
return rawData[ind];
}
/// Get access to data transfer between blocks
virtual NTensorFieldDataTransfer3D<T>& getDataTransfer();
/// Get access to data transfer between blocks (const version)
virtual NTensorFieldDataTransfer3D<T> const& getDataTransfer() const;
private:
void allocateMemory();
void releaseMemory();
private:
T *rawData;
T ****field;
NTensorFieldDataTransfer3D<T> dataTransfer;
};
} // namespace plb
#endif // DATA_FIELD_3D_H
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