This file is indexed.

/usr/include/OTB-6.4/otbPeriodicSOM.h is in libotb-dev 6.4.0+dfsg-1.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
/*
 * Copyright (C) 2005-2017 Centre National d'Etudes Spatiales (CNES)
 * Copyright (C) 2007-2012 Institut Mines Telecom / Telecom Bretagne
 *
 * This file is part of Orfeo Toolbox
 *
 *     https://www.orfeo-toolbox.org/
 *
 * Licensed under the Apache License, Version 2.0 (the "License");
 * you may not use this file except in compliance with the License.
 * You may obtain a copy of the License at
 *
 *     http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 * See the License for the specific language governing permissions and
 * limitations under the License.
 */


#ifndef otbPeriodicSOM_h
#define otbPeriodicSOM_h

#include "otbSOM.h"

namespace otb
{

/**
 * \class PeriodicSOM
 * \brief This class is responsible for the learning of a self organizing
 * map when considered as a torus.
 *
 * This class extends the SOM object which implements the Self
 * Organizing Map (or Kohonen map) learning.
 *
 * The learning process iteratively select the best-response neuron for each input vector,
 * enhancing its response and the response of its neighbors with respect to a certain radius,
 * computed from an initial radius, and to a certain learning factor, decreasing at each iteration.
 *
 * The behavior of the neighborhood is given by a functor (templated) which parameter is the current
 * iteration. It returns a neighborhood of type \code SizeType \endcode.
 *
 * The behavior of the learning factor (hold by a beta variable) is given by an other functor
 * which parameter is the current iteration. It returns a beta value of type \code double \endcode.
 *
 * The SOMMap produced as output can be either initialized with a constant custom value or randomly
 * generated following a normal law. The seed for the random initialization can be modified.
 *
 * \sa SOMMap
 * \sa SOMActivationBuilder
 * \sa CzihoSOMLearningBehaviorFunctor
 * \sa CzihoSOMNeighborhoodBehaviorFunctor
 *
 * \ingroup OTBSOM
 */
template <class TListSample, class TMap,
    class TSOMLearningBehaviorFunctor = Functor::CzihoSOMLearningBehaviorFunctor,
    class TSOMNeighborhoodBehaviorFunctor = Functor::CzihoSOMNeighborhoodBehaviorFunctor>
class ITK_EXPORT PeriodicSOM
  : public SOM<TListSample, TMap, TSOMLearningBehaviorFunctor, TSOMNeighborhoodBehaviorFunctor>
{
public:
  /** Standard typedefs */
  typedef PeriodicSOM Self;
  typedef SOM<TListSample, TMap,
      TSOMLearningBehaviorFunctor,
      TSOMNeighborhoodBehaviorFunctor> Superclass;
  typedef itk::SmartPointer<Self>       Pointer;
  typedef itk::SmartPointer<const Self> ConstPointer;

  /** Creation through object factory macro */
  itkNewMacro(Self);

  /** Runtime information macro */
  itkTypeMacro(PeriodicSOM, SOM);

  typedef TListSample                      ListSampleType;
  typedef typename ListSampleType::Pointer ListSamplePointerType;
  typedef TMap                             MapType;
  typedef typename MapType::PixelType      NeuronType;
  typedef typename NeuronType::ValueType   ValueType;
  typedef typename MapType::IndexType      IndexType;
  typedef typename MapType::SizeType       SizeType;
  typedef typename MapType::RegionType     RegionType;
  typedef typename MapType::Pointer        MapPointerType;

protected:
  /** Constructor */
  PeriodicSOM() {}
  /** Destructor */
  ~PeriodicSOM() ITK_OVERRIDE {}
  /** Output information redefinition */
  void GenerateOutputInformation() ITK_OVERRIDE
  {
    Superclass::GenerateOutputInformation ();
  }
  /** Output allocation redefinition */
  void AllocateOutputs() ITK_OVERRIDE
  {
    Superclass::AllocateOutputs();
  }
  /** Main computation method */
  void GenerateData(void) ITK_OVERRIDE
  {
    Superclass::GenerateData();
  }
  /**
  * Update the output map with a new sample.
  * \param sample The new sample to learn,
  * \param beta The learning coefficient,
  * \param radius The radius of the nieghbourhood.
  */
  void UpdateMap(const NeuronType& sample, double beta, SizeType& radius) ITK_OVERRIDE;
  /**
  * Step one iteration.
  */
  void Step(unsigned int currentIteration) ITK_OVERRIDE
  {
    Superclass::Step(currentIteration);
  }
  /** PrintSelf method */
  void PrintSelf(std::ostream& os, itk::Indent indent) const ITK_OVERRIDE
  {
    Superclass::PrintSelf(os, indent);
  }

private:
  PeriodicSOM(const Self &); // purposely not implemented
  void operator =(const Self&); // purposely not implemented

}; // end of class

} // end of namespace otb

#ifndef OTB_MANUAL_INSTANTIATION
#include "otbPeriodicSOM.txx"
#endif

#endif