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/usr/share/dune/cmake/scripts/CreateDoxyFile.cmake is in libdune-common-dev 2.5.1-1.

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# For now we just support appending Doxyfile and Doxylocal
file(READ ${DOXYSTYLE} file_contents)
file(WRITE Doxyfile.in ${file_contents})
if(DOXYLOCAL)
  file(READ ${DOXYLOCAL} file_contents)
endif()
file(APPEND Doxyfile.in ${file_contents})

# configure_file does not work as it insists an existing input file, which in our
# needs to be generated first.
# Therefore we read the Doxyfile.in and replace the variables using string(CONFIGURE)
# and then write the file.
file(READ Doxyfile.in file_contents)
string(CONFIGURE ${file_contents} output)
file(WRITE Doxyfile ${output})