/usr/share/xcrysden/Tcl/wnKPath.tcl is in xcrysden-data 1.5.60-1build3.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 | #############################################################################
# Author: #
# ------ #
# Anton Kokalj Email: Tone.Kokalj@ijs.si #
# Department of Physical and Organic Chemistry Phone: x 386 1 477 3523 #
# Jozef Stefan Institute Fax: x 386 1 477 3811 #
# Jamova 39, SI-1000 Ljubljana #
# SLOVENIA #
# #
# Source: $XCRYSDEN_TOPDIR/Tcl/wnKPath.tcl
# ------ #
# Copyright (c) 1996-2003 by Anton Kokalj #
#############################################################################
proc wnKPath {dir} {
global Bz BzOK prop system geng periodic xcMisc
# now struct file should be read and then BZ toplevel displayed
# with XCrySDen's k-Path Selection: directory
XCRYSDEN_Logo $dir
if [winfo exists .title] {
destroy .title
}
##########################################
# in WIEN2k there it is always 3D system #
##########################################
set periodic(dim) 3
set species crystal
cd $system(SCRDIR)
set BzOK(wien_kpath) 1
set BzOK(wien_dir) [file tail $dir]
#
# check if $dir is a struct file or a directory !!!
#
if { [file isfile $dir] } {
# it's a struct-file
set filehead [file rootname $dir]
} else {
# it's a case directory
set filehead $dir/[file tail $dir]
}
#
# read the struct file and produce xc_struc.$$
#
xcDebug "Executing: $system(FORDIR)/str2xcr $filehead, PWD=[pwd]"
if { [catch {exec $system(FORDIR)/str2xcr $filehead} errMsg] } {
ErrorDialog "while executing \"str2xcr\" program." $errMsg
CloseCase
}
# now copy $filehead.xcr to $system(SCRDIR)/xc_str2xcr.$$
file rename -force ${filehead}.xcr $system(SCRDIR)/xc_str2xcr.$system(PID)
#
# WIEN2k struct file is in BOHRs, thatwhy xc_str2xcr.$$ is in BOHRs
#
set geng(M3_ARGUMENT) [GetGengM3Arg BOHR 95]
xcAppendState wien
set periodic(igroup) 1
xcDebug "Going to GenGeom"
GenGeom $geng(M1_PRIM) $geng(M2_CELL) $geng(M3_ARGUMENT) \
$periodic(igroup) \
1 1 1 $system(SCRDIR)/xc_struc.$system(PID)
# determine the periodic(igroup)
set fileID [open "$system(SCRDIR)/xc_struc.$system(PID)" r]
GetDimGroup periodic(dim) periodic(igroup) $fileID
close $fileID
xcDebug "Going to xc_readXSF"
################################################
xc_readXSF $system(SCRDIR)/xc_struc.$system(PID)
################################################
#
# render the k-Path selector window
#
set BzOK(done) 0
Bz_MakeToplevel
#
# OK, either the k-path was selected or a cancel button was pressed
#
if { !$BzOK(done) } {
# Cancel button was pressed; EXIT
exit_pr -silent
exit
}
#----------------------------------
# Prepare k_list-file:
#----------------------------------
# band structure script looks like:
#
# BAND
# a-b-c-d-
# 3 8 200 1 100 1 0
# 0 0 0 4 4 0
# 4 4 0 4 2 -2
# 4 2 -2 5 3 0
#
set script [split $prop(c95_BAND_script) \n]
if { [lindex $script 0] == "CONVCELL" } {
set script [lrange $script 1 end]
}
set labels [split [lindex $script 1] -]
set idv $BzOK(iss)
set kp [expr $prop(NLINE) + 1]
set nk $BzOK(nK)
# set emin $BzOK(Emin)
# set emax $BzOK(Emax)
set emin -8.0
set emax 8.0
for {set i 3} {$i < [expr 2 + $prop(NLINE)]} {incr i} {
set line [lindex $script $i]
set ii [expr $i - 3]
set coor(x,$ii) [lindex $line 0]
set coor(y,$ii) [lindex $line 1]
set coor(z,$ii) [lindex $line 2]
}
set line [lindex $script $i]
set ii [expr $i - 3]
set coor(x,$ii) [lindex $line 0]
set coor(y,$ii) [lindex $line 1]
set coor(z,$ii) [lindex $line 2]
incr ii
set coor(x,$ii) [lindex $line 3]
set coor(y,$ii) [lindex $line 4]
set coor(z,$ii) [lindex $line 5]
# now we are ready to construct k_list file
set k_list "$kp $nk $idv $emin $emax\n"
# set k_list "$kp $nk $idv \n"
append k_list "$Bz(rendered)\n"
set unk 0
for {set i 0} {$i <= $ii} {incr i} {
set l [lindex $labels $i]
if { $l == {} } {
set l X$unk
incr unk
}
set l [format "'%-10s'" $l]
append k_list "$coor(x,$i) $coor(y,$i) $coor(z,$i) $l\n"
}
xcDebug -stderr "XCRYSDEN-to-WIEN k-list file:"
xcDebug -stderr "-----------------------------"
xcDebug -stderr $k_list
# prompt for a name of final k-list file
WriteFile $system(SCRDIR)/xc_klist.$system(PID) $k_list w
set filetypes {
{{WIEN2k K-List File} {.klist} }
{{All Files} * }
}
set sfile [tk_getSaveFile -initialdir $system(PWD) \
-title "Save WIEN2k K-List File" \
-defaultextension .klist \
-filetypes $filetypes]
# maybe Cancel button was pressed
if { $sfile == {} } { exit_pr -silent; exit }
#
# finaly execute a kPath program and save the klist into $sfile
#
xcDebug "exec $system(FORDIR)/kPath \
$system(SCRDIR)/xc_struc.$system(PID) \
$system(SCRDIR)/xc_klist.$system(PID)"
cd $system(SCRDIR)
if { [catch {exec $system(FORDIR)/kPath \
$system(SCRDIR)/xc_struc.$system(PID) \
$system(SCRDIR)/xc_klist.$system(PID) > \
$sfile} errMsg] } {
ErrorDialog "while executing \"kPath\" program." $errMsg
}
#
# provide some supporting information to check if the generated k-points are OK
#
global wnKP
#set wnKP(npoi) $Bz($can,nselected)
#set wnKP(M) $BzOK(iss)
#set wnKP(type) $type
#/
if { $wnKP(type) == "prim" } {
set type "RECIPROCAL-PRIMITIVE"
} else {
set type "RECIPROCAL-CONVENTIONAL"
}
set supportInfo "================================================================\n"
append supportInfo " * * * S U P P O R T I N G I N F O R M A T I O N * * * \n"
append supportInfo "================================================================\n"
append supportInfo "\n"
append supportInfo "BEWARE: the conversion of selected k-point coordinates to format\n"
append supportInfo " suitable for the WIEN2k program is buggy.\n"
append supportInfo "\n"
append supportInfo " !!! USE AT YOUR OWN RISK !!!\n"
append supportInfo " !!! PLEASE CHECK BELOW DATA FOR CONSISTENCY !!!\n"
append supportInfo "\n"
append supportInfo "Number of selected k-points: $wnKP(npoi)\n\n"
append supportInfo "**ORIGINAL DATASET**\n"
append supportInfo "--------------------\n"
append supportInfo "THE FOLLOWING k-POINT WERE SELECTED:\n"
append supportInfo "(crystal coordinates with respect to $type vectors)\n\n"
for {set i 1} {$i <= $wnKP(npoi)} {incr i} {
append supportInfo [format " % 10.5f % 10.5f %10.5f %s\n" \
$wnKP(poi,$i,1) $wnKP(poi,$i,2) $wnKP(poi,$i,3) $wnKP(label,$i)]
}
append supportInfo "\n**REPRODUCED(TRANSFORMED) DATASET for WIEN2k**\n"
append supportInfo "----------------------------------------------\n"
append supportInfo "IMPORTANT:\n"
append supportInfo "Check if the data presented below are consistent with the data from ORIGINAL DATASET !!!\n\n"
append supportInfo [ReadFile supportInfo-1.kpath]
append supportInfo "\n"
append supportInfo "Transformed selected k-points for WIEN2k:\n"
append supportInfo "----------------------------------------\n"
append supportInfo [ReadFile supportInfo-2.kpath]
append supportInfo "\n"
append supportInfo "The content of the generated WIEN2k k-list file is the following:\n"
append supportInfo "----------------------------------------------------------------\n"
append supportInfo [ReadFile $sfile]
WriteFile $system(PWD)/supportInfo.kpath $supportInfo w
if { [file exists supportInfo-1.kpath] } { file delete supportInfo-1.kpath }
if { [file exists supportInfo-2.kpath] } { file delete supportInfo-2.kpath }
set t [xcDisplayVarText $supportInfo "k-path: Supporting Information"]
if { [winfo exists $t.f1.t] } {
catch {$t.f1.t configure -height 30 -width 90}
catch {$t.f1.t configure -state disabled}
}
tkwait window $t
exit_pr -silent
exit
}
|