This file is indexed.

/usr/share/doc/stilts/sun256/tapskymatch-usage.html is in stilts-doc 3.1.2-2.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
<html>
   
   <head>
      <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
      <link rel="stylesheet" type="text/css" href="sun-style.css">
      <title>Usage</title>
   </head>
   
   <body>
      <hr>
      <a href="secB.23.2.html">Next</a> <a href="tapskymatch.html">Previous</a> <a href="tapskymatch.html">Up</a> <a href="index.html">Contents</a> <br> <b>Next: </b><a href="secB.23.2.html">Examples</a><br>
       <b>Up: </b><a href="tapskymatch.html">tapskymatch:
         Crossmatches table on sky position against TAP table</a><br>
       <b>Previous: </b><a href="tapskymatch.html">tapskymatch:
         Crossmatches table on sky position against TAP table</a><br>
      
      <hr>
      <h3><a name="tapskymatch-usage">B.23.1 Usage</a></h3>
      <p>The usage of <code>tapskymatch</code> is
         <pre>
   stilts &lt;stilts-flags&gt; tapskymatch ifmt=&lt;in-format&gt; istream=true|false
                                     icmd=&lt;cmds&gt; ocmd=&lt;cmds&gt;
                                     omode=out|meta|stats|count|cgi|discard|topcat|samp|tosql|gui
                                     out=&lt;out-table&gt; ofmt=&lt;out-format&gt;
                                     inlon=&lt;expr/deg&gt; inlat=&lt;expr/deg&gt;
                                     tapurl=&lt;url-value&gt; taptable=&lt;name&gt;
                                     taplon=&lt;column&gt; taplat=&lt;column&gt;
                                     tapcols=&lt;colname,...&gt; sr=&lt;expr/deg&gt;
                                     find=all|best|each|each-dist
                                     blocksize=&lt;int-value&gt; maxrec=&lt;int-value&gt;
                                     sync=true|false blockmaxrec=&lt;nrow&gt;
                                     compress=true|false fixcols=none|dups|all
                                     suffixin=&lt;label&gt; suffixremote=&lt;label&gt;
                                     [in=]&lt;table&gt;
</pre>
         If you don't have the <code>stilts</code> script installed,
         write "<code>java -jar stilts.jar</code>" instead of
         "<code>stilts</code>" - see <a href="invoke.html">Section 3</a>.
         The available <code>&lt;stilts-flags&gt;</code> are listed
         in <a href="stilts-flags.html">Section 2.1</a>.
         For programmatic invocation, the Task class for this
         command is <code>uk.ac.starlink.ttools.task.TapUploadSkyMatch</code>.
         
      </p>
      <p>Parameter values are assigned on the command line
         as explained in <a href="task-args.html">Section 2.3</a>.
         They are as follows:
         
      </p>
      <p>
         
         <dl>
            <dt><strong><code>blockmaxrec = &lt;nrow&gt;</code> &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;<em>(Long)</em></strong></dt>
            <dd>Sets the MAXREC parameter passed to the TAP service
               for each uploaded block.
               This allows you to request that the service overrides its
               default limit for the number of rows output from a single query.
               The service may still impose some "hard" limit beyond which
               the output row count cannot be increased.
               
               <p>Note this differs from the
                  <code>maxrec</code>
                  parameter, which gives the maximum total number of rows
                  to be returned from this command.
                  
               </p>
            </dd>
            <dt><strong><code>blocksize = &lt;int-value&gt;</code> &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;<em>(Integer)</em></strong></dt>
            <dd>The number of rows uploaded in each TAP query.
               TAP services may have limits on the number of rows in
               a table uploaded for matching.
               This command can therefore break up input tables into blocks
               and make a number of individual TAP queries to generate the
               result.
               This parameter controls the maximum number of rows uploaded
               in each individual request.
               For an input table with fewer rows than this value,
               the whole thing is done as a single query.
               
               <p>[Default: <code>5000</code>]
               </p>
            </dd>
            <dt><strong><code>compress = true|false</code> &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;<em>(Boolean)</em></strong></dt>
            <dd>If true, the service is requested to provide HTTP-level
               compression for the response stream
               (Accept-Encoding header is set to "<code>gzip</code>",
               see RFC 2616).
               This does not guarantee that compression will happen
               but if the service honours this request it may result in
               a smaller amount of network traffic
               at the expense of more processing on the server and client.
               
               <p>[Default: <code>true</code>]
               </p>
            </dd>
            <dt><strong><code>find = all|best|each|each-dist</code> &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;<em>(<a href="http://andromeda.star.bris.ac.uk/starjavadocs/uk/ac/starlink/ttools/task/UserFindMode.html">UserFindMode</a>)</em></strong></dt>
            <dd>Determines which pair matches are included in the result.
               
               <ul>
                  <li><code>all</code>: All matches
                  </li>
                  <li><code>best</code>: Matched rows, best remote row for each input row
                  </li>
                  <li><code>each</code>: One row per input row, contains best remote match or blank
                  </li>
                  <li><code>each-dist</code>: One row per input row, column giving distance only for best match
                  </li>
               </ul>
               Note only the <code>all</code> mode
               is symmetric between the two tables.
               
               <p>[Default: <code>all</code>]
               </p>
            </dd>
            <dt><strong><code>fixcols = none|dups|all</code> &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;<em>(<a href="http://andromeda.star.bris.ac.uk/starjavadocs/uk/ac/starlink/ttools/task/JoinFixActionParameter.Fixer.html">Fixer</a>)</em></strong></dt>
            <dd>Determines how input columns are renamed before
               use in the output table.  The choices are:
               
               <ul>
                  <li><code>none</code>: columns are not renamed
                  </li>
                  <li><code>dups</code>: columns which would otherwise have duplicate names in the output will be renamed
                     to indicate which table they came from
                  </li>
                  <li><code>all</code>: all columns will be renamed to indicate which table they came from
                  </li>
               </ul>
               If columns are renamed, the new ones are determined
               by <code>suffix*</code> parameters.
               
               <p>[Default: <code>dups</code>]
               </p>
            </dd>
            <dt><strong><code>icmd = &lt;cmds&gt;</code> &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;<em>(<a href="http://andromeda.star.bris.ac.uk/starjavadocs/uk/ac/starlink/ttools/filter/ProcessingStep.html">ProcessingStep[]</a>)</em></strong></dt>
            <dd>Specifies processing to be performed on
               the input table as specified by parameter <code>in</code>,
               before any other processing has taken place.
               The value of this parameter is one or more of the filter
               commands described in <a href="filterSteps.html">Section 6.1</a>.
               If more than one is given, they must be separated by
               semicolon characters (";").
               This parameter can be repeated multiple times on the same
               command line to build up a list of processing steps.
               The sequence of commands given in this way
               defines the processing pipeline which is performed on the table.
               
               <p>Commands may alteratively be supplied in an external file,
                  by using the indirection character '@'.
                  Thus a value of "<code>@filename</code>"
                  causes the file <code>filename</code> to be read for a list
                  of filter commands to execute.  The commands in the file
                  may be separated by newline characters and/or semicolons.
                  
               </p>
            </dd>
            <dt><strong><code>ifmt = &lt;in-format&gt;</code> &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;<em>(String)</em></strong></dt>
            <dd>Specifies the format of the input table as specified by parameter <code>in</code>.
               The known formats are listed in <a href="inFormats.html">Section 5.2.1</a>.
               This flag can be used if you know what format your
               table is in.
               If it has the special value
               <code>(auto)</code> (the default),
               then an attempt will be
               made to detect the format of the table automatically.
               This cannot always be done correctly however, in which case
               the program will exit with an error explaining which
               formats were attempted.
               
               <p>[Default: <code>(auto)</code>]
               </p>
            </dd>
            <dt><strong><code>in = &lt;table&gt;</code> &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;<em>(<a href="http://www.starlink.ac.uk/stil/javadocs/uk/ac/starlink/table/StarTable.html">StarTable</a>)</em></strong></dt>
            <dd>The location of the input table.
               This may take one of the following forms:
               
               <ul>
                  <li>A filename.</li>
                  <li>A URL.</li>
                  <li>The special value "<code>-</code>",
                     meaning standard input.
                     In this case the input format must be given explicitly
                     using the <code>ifmt</code>
                     parameter.
                     Note that not all formats can be streamed in this way.
                  </li>
                  <li>A system command line with
                     either a "<code>&lt;</code>" character at the start,
                     or a "<code>|</code>" character at the end
                     ("<code>&lt;syscmd</code>" or
                     "<code>syscmd|</code>").
                     This executes the given pipeline and reads from its
                     standard output.
                     This will probably only work on unix-like systems.
                  </li>
               </ul>
               
               In any case, compressed data in one of the supported compression
               formats (gzip, Unix compress or bzip2) will be decompressed
               transparently.
               
            </dd>
            <dt><strong><code>inlat = &lt;expr/deg&gt;</code> &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;<em>(String)</em></strong></dt>
            <dd>Longitude in degrees for the position of each row
               in the input table.
               This may simply be a column name, or it may be
               an algebraic expression as explained in <a href="jel.html">Section 10</a>.
               The coordinate system must match that used for the
               coordinates in the remote table.
               
            </dd>
            <dt><strong><code>inlon = &lt;expr/deg&gt;</code> &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;<em>(String)</em></strong></dt>
            <dd>Longitude in degrees for the position of each row
               in the input table.
               This may simply be a column name, or it may be
               an algebraic expression as explained in <a href="jel.html">Section 10</a>.
               The coordinate system must match that used for the
               coordinates in the remote table.
               
            </dd>
            <dt><strong><code>istream = true|false</code> &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;<em>(Boolean)</em></strong></dt>
            <dd>If set true, the input table
               specified by the <code>in</code> parameter
               will be read as a stream.
               It is necessary to give the 
               <code>ifmt</code> parameter
               in this case.
               Depending on the required operations and processing mode,
               this may cause the read to fail (sometimes it is necessary
               to read the table more than once).
               It is not normally necessary to set this flag;
               in most cases the data will be streamed automatically
               if that is the best thing to do.
               However it can sometimes result in less resource usage when
               processing large files in certain formats (such as VOTable).
               
               <p>[Default: <code>false</code>]
               </p>
            </dd>
            <dt><strong><code>maxrec = &lt;int-value&gt;</code> &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;<em>(Integer)</em></strong></dt>
            <dd>Limit to the number of rows resulting from this operation.
               If the value is negative (the default) no limit is imposed.
               Note however that there can be truncation of the result
               if the number of records returned from a single chunk
               exceeds limits imposed by the service.
               
               <p>[Default: <code>-1</code>]
               </p>
            </dd>
            <dt><strong><code>ocmd = &lt;cmds&gt;</code> &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;<em>(<a href="http://andromeda.star.bris.ac.uk/starjavadocs/uk/ac/starlink/ttools/filter/ProcessingStep.html">ProcessingStep[]</a>)</em></strong></dt>
            <dd>Specifies processing to be performed on
               the output table,
               after all other processing has taken place.
               The value of this parameter is one or more of the filter
               commands described in <a href="filterSteps.html">Section 6.1</a>.
               If more than one is given, they must be separated by
               semicolon characters (";").
               This parameter can be repeated multiple times on the same
               command line to build up a list of processing steps.
               The sequence of commands given in this way
               defines the processing pipeline which is performed on the table.
               
               <p>Commands may alteratively be supplied in an external file,
                  by using the indirection character '@'.
                  Thus a value of "<code>@filename</code>"
                  causes the file <code>filename</code> to be read for a list
                  of filter commands to execute.  The commands in the file
                  may be separated by newline characters and/or semicolons.
                  
               </p>
            </dd>
            <dt><strong><code>ofmt = &lt;out-format&gt;</code> &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;<em>(String)</em></strong></dt>
            <dd>Specifies the format in which the output table will be written
               (one of the ones in <a href="outFormats.html">Section 5.2.2</a> - matching is
               case-insensitive and you can use just the first few letters).
               If it has the special value
               "<code>(auto)</code>"
               (the default),
               then the output filename will be
               examined to try to guess what sort of file is required
               usually by looking at the extension.
               If it's not obvious from the filename what output format is
               intended, an error will result.
               
               <p>This parameter must only be given if
                  <code>omode</code>
                  has its default value of "<code>out</code>".
                  
               </p>
               <p>[Default: <code>(auto)</code>]
               </p>
            </dd>
            <dt><strong><code>omode = out|meta|stats|count|cgi|discard|topcat|samp|tosql|gui</code> &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;<em>(<a href="http://andromeda.star.bris.ac.uk/starjavadocs/uk/ac/starlink/ttools/mode/ProcessingMode.html">ProcessingMode</a>)</em></strong></dt>
            <dd>The mode in which the result table will be output.
               The default mode is <code>out</code>, which means that
               the result will be written as a new table to disk or elsewhere,
               as determined by the <code>out</code> and <code>ofmt</code>
               parameters.
               However, there are other possibilities, which correspond
               to uses to which a table can be put other than outputting it,
               such as displaying metadata, calculating statistics,
               or populating a table in an SQL database.
               For some values of this parameter, additional parameters
               (<code>&lt;mode-args&gt;</code>)
               are required to determine the exact behaviour.
               
               <p>Possible values are
                  
                  <ul>
                     <li><code>out</code></li>
                     <li><code>meta</code></li>
                     <li><code>stats</code></li>
                     <li><code>count</code></li>
                     <li><code>cgi</code></li>
                     <li><code>discard</code></li>
                     <li><code>topcat</code></li>
                     <li><code>samp</code></li>
                     <li><code>tosql</code></li>
                     <li><code>gui</code></li>
                  </ul>
                  
                  Use the <code>help=omode</code> flag
                  or see <a href="outModes.html">Section 6.4</a> for more information.
                  
               </p>
               <p>[Default: <code>out</code>]
               </p>
            </dd>
            <dt><strong><code>out = &lt;out-table&gt;</code> &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;<em>(<a href="http://andromeda.star.bris.ac.uk/starjavadocs/uk/ac/starlink/ttools/TableConsumer.html">TableConsumer</a>)</em></strong></dt>
            <dd>The location of the output table.  This is usually a filename
               to write to.
               If it is equal to the special value "-" (the default)
               the output table will be written to standard output.
               
               <p>This parameter must only be given if
                  <code>omode</code>
                  has its default value of "<code>out</code>".
                  
               </p>
               <p>[Default: <code>-</code>]
               </p>
            </dd>
            <dt><strong><code>sr = &lt;expr/deg&gt;</code> &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;<em>(String)</em></strong></dt>
            <dd>Maximum distance in degrees
               from the local table (lat,lon) position
               at which counterparts from the remote table will be identified.
               This is an ADQL expression interpreted within the TAP service,
               so it may be a constant value or may involve columns in
               the remote table.
               
            </dd>
            <dt><strong><code>suffixin = &lt;label&gt;</code> &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;<em>(String)</em></strong></dt>
            <dd>If the <code>fixcols</code> parameter
               is set so that input columns are renamed for insertion into
               the output table, this parameter determines how the
               renaming is done.
               It gives a suffix which is appended to all renamed columns
               from the input table.
               
               <p>[Default: <code>_in</code>]
               </p>
            </dd>
            <dt><strong><code>suffixremote = &lt;label&gt;</code> &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;<em>(String)</em></strong></dt>
            <dd>If the <code>fixcols</code> parameter
               is set so that input columns are renamed for insertion into
               the output table, this parameter determines how the
               renaming is done.
               It gives a suffix which is appended to all renamed columns
               from the TAP result table.
               
               <p>[Default: <code>_tap</code>]
               </p>
            </dd>
            <dt><strong><code>sync = true|false</code> &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;<em>(Boolean)</em></strong></dt>
            <dd>Determines whether the TAP queries are submitted
               in synchronous or asynchronous mode.
               Since this command uses chunking to keep requests to a
               reasonable size, hopefully requests will not take too
               long to execute, therefore the default is synchronous (true).
               
               <p>[Default: <code>true</code>]
               </p>
            </dd>
            <dt><strong><code>tapcols = &lt;colname,...&gt;</code> &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;<em>(String[])</em></strong></dt>
            <dd>Comma-separated list of column names
               to retrieve from the remote table.
               If no value is supplied (the default),
               all columns from the remote table will be returned.
               
            </dd>
            <dt><strong><code>taplat = &lt;column&gt;</code> &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;<em>(String)</em></strong></dt>
            <dd>Latitude in degrees for the position of each row
               in the remote table.
               This is an ADQL expression interpreted within the TAP service,
               typically just a column name.
               The coordinate system must match that used for the input table.
               
            </dd>
            <dt><strong><code>taplon = &lt;column&gt;</code> &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;<em>(String)</em></strong></dt>
            <dd>Longitude in degrees for the position of each row
               in the remote table.
               This is an ADQL expression interpreted within the TAP service,
               typically just a column name.
               The coordinate system must match that used for the input table.
               
            </dd>
            <dt><strong><code>taptable = &lt;name&gt;</code> &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;<em>(String)</em></strong></dt>
            <dd>Name of the table in the given TAP service
               against which the matching will be performed.
               
            </dd>
            <dt><strong><code>tapurl = &lt;url-value&gt;</code> &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;<em>(<a href="http://docs.oracle.com/javase/6/docs/api/java/net/URL.html">URL</a>)</em></strong></dt>
            <dd>The base URL of a Table Access Protocol service.
               This is the bare URL without a trailing "/[a]sync".
               
               <p>The default values of the various endpoints
                  (sync and async query submission, tables metadata,
                  service-provided examples etc)
                  use this URL as a parent
                  and append standard sub-paths.
                  However, other parameters (<code>syncurl</code>, <code>asyncurl</code>, ...)
                  are provided so that the different endpoints
                  can be set individually if required.
                  
               </p>
            </dd>
         </dl>
         
      </p>
      <hr><a href="secB.23.2.html">Next</a> <a href="tapskymatch.html">Previous</a> <a href="tapskymatch.html">Up</a> <a href="index.html">Contents</a> <br> <b>Next: </b><a href="secB.23.2.html">Examples</a><br>
       <b>Up: </b><a href="tapskymatch.html">tapskymatch:
         Crossmatches table on sky position against TAP table</a><br>
       <b>Previous: </b><a href="tapskymatch.html">tapskymatch:
         Crossmatches table on sky position against TAP table</a><br>
      
      <hr><i>STILTS - Starlink Tables Infrastructure Library Tool Set<br>Starlink User Note256<br>STILTS web page:
         <a href="http://www.starlink.ac.uk/stilts/">http://www.starlink.ac.uk/stilts/</a><br>Author email:
         <a href="mailto:m.b.taylor@bristol.ac.uk">m.b.taylor@bristol.ac.uk</a><br>Mailing list:
         <a href="mailto:topcat-user@jiscmail.ac.uk">topcat-user@jiscmail.ac.uk</a><br></i></body>
</html>