This package is 347.6 KB.
It is available at http://archive.ubuntu.com/ubuntu/pool/universe/s/seqsero/seqsero_1.0-1_all.deb
.
View its full control file here:
debian/control.
Salmonella serotyping from genome sequencing data
This package depends on:
python:any (>= 2.7.5-5~), python-biopython, bwa, samtools, sra-toolkit.
This package does not recommend any other package.
This package suggests:
ispcr.
This package does not conflict with any other package.
seqsero 1.0-1 is in ubuntu - bionic / universe. This package's architecture is: architectureless.
| File | Mime Type | Owner | Mode | Size |
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postinst
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text/x-shellscript | N/A | N/A | 175 bytes |
prerm
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text/x-shellscript | N/A | N/A | 251 bytes |
/usr/
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/usr/bin/
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/usr/bin/seqsero
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/usr/bin/seqsero_batch_pair-end
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/usr/share/seqsero/database/FljB_l,z13,z28_whole.fasta
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/usr/share/seqsero/database/H_new_fljB_protein_database.fasta
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/usr/share/seqsero/database/new_Oserotype.fasta
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/usr/share/seqsero/libs/compare_and_change_two_fastq_id.py
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/usr/share/seqsero/libs/Initial_Conditions.py
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/usr/share/seqsero/libs/Initial_functions.py
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/usr/share/seqsero/libs/Otype_determine_analysis.py
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/usr/share/seqsero/libs/run_auto_All_for_assemblies.py
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/usr/share/seqsero/libs/run_auto_All_for_web_multi_revise.py
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/usr/share/seqsero/libs/special_gene_test_assemblies.py
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/usr/share/seqsero/libs/split_interleaved_fastq.pl
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/usr/share/seqsero/libs/splitPairedEndReads.pl
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/usr/share/seqsero/primers/
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/usr/share/seqsero/primers/seq_primer_fliC.txt
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/usr/share/seqsero/primers/seq_primer_fljB.txt
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/usr/share/seqsero/SeqSero.py
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