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Some tools rely on NCBI taxonomy:
ktClassifyBLAST
ktGetTaxIDFromGI
ktImportBLAST
ktImportMETAREP-BLAST
ktImportTaxonomy
To use these tools,
krona_updateTaxonomy
must be run after installing. This will install the local taxonomy database to
/var/lib/kronatools/taxonomy
which uses about 4 GB of space and requires an additional 12 GB of scratch
space during installation. It can also be run later to keep the local database up to date with NCBI.
For more detailed information see
https://github.com/marbl/Krona/wiki
-- Andreas Tille <tille@debian.org> Wed, 27 Jul 2016 11:44:17 +0200
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