This file is indexed.

/usr/lib/R/site-library/BSgenome/extdata/ is in r-bioc-bsgenome 1.46.0-1.

This file is owned by root:root, with mode 0o755.

File Mime Type Owner Mode Size
..
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/ root:root 0o755
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/1000genomes/ root:root 0o755
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/1000genomes/BSgenome.Hsapiens.1000g.b36female-seed text/plain root:root 0o644 950 bytes
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/1000genomes/BSgenome.Hsapiens.1000g.b36female-tools// root:root 0o755
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/1000genomes/BSgenome.Hsapiens.1000g.b36female-tools/split_human_b36_female.sh text/x-shellscript root:root 0o755 1.7 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Amellifera.BeeBase.assembly4-seed text/plain root:root 0o644 714 bytes
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Amellifera.BeeBase.assembly4-tools/ root:root 0o755
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Amellifera.BeeBase.assembly4-tools/NOTES.TXT text/plain root:root 0o644 1.0 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Amellifera.BeeBase.assembly4-tools/splitbigfasta.sh text/x-shellscript root:root 0o755 1.1 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Amellifera.UCSC.apiMel2-seed text/plain root:root 0o644 843 bytes
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Amellifera.UCSC.apiMel2.masked-seed text/plain root:root 0o644 1.3 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Athaliana.TAIR.04232008-seed text/plain root:root 0o644 1.2 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Athaliana.TAIR.TAIR9-seed text/plain root:root 0o644 983 bytes
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Athaliana.TAIR.TAIR9-tools/ root:root 0o755
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Athaliana.TAIR.TAIR9-tools/NOTES.TXT text/plain root:root 0o644 4.1 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Btaurus.UCSC.bosTau3-seed text/plain root:root 0o644 1.5 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Btaurus.UCSC.bosTau3.masked-seed text/plain root:root 0o644 1.4 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Btaurus.UCSC.bosTau4-seed text/plain root:root 0o644 1.5 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Btaurus.UCSC.bosTau4.masked-seed text/plain root:root 0o644 1.4 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Btaurus.UCSC.bosTau6-seed text/plain root:root 0o644 1.8 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Btaurus.UCSC.bosTau6-tools/ root:root 0o755
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Btaurus.UCSC.bosTau6-tools/splitbigfasta.R text/plain root:root 0o644 667 bytes
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Btaurus.UCSC.bosTau6.masked-seed text/plain root:root 0o644 1.4 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Btaurus.UCSC.bosTau8-seed text/plain root:root 0o644 1.9 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Celegans.UCSC.ce10-seed text/plain root:root 0o644 1.9 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Celegans.UCSC.ce11-seed text/plain root:root 0o644 944 bytes
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Celegans.UCSC.ce2-seed text/plain root:root 0o644 1.8 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Celegans.UCSC.ce6-seed text/plain root:root 0o644 1.9 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Cfamiliaris.UCSC.canFam2-seed text/plain root:root 0o644 1.8 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Cfamiliaris.UCSC.canFam2.masked-seed text/plain root:root 0o644 1.4 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Cfamiliaris.UCSC.canFam3-seed text/plain root:root 0o644 1.9 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Cfamiliaris.UCSC.canFam3-tools/ root:root 0o755
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Cfamiliaris.UCSC.canFam3-tools/splitbigfasta.R text/plain root:root 0o644 667 bytes
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Cfamiliaris.UCSC.canFam3.masked-seed text/plain root:root 0o644 1.5 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Dmelanogaster.UCSC.dm2-seed text/plain root:root 0o644 1.9 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Dmelanogaster.UCSC.dm2.masked-seed text/plain root:root 0o644 1.4 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Dmelanogaster.UCSC.dm3-seed text/plain root:root 0o644 2.3 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Dmelanogaster.UCSC.dm3.masked-seed text/plain root:root 0o644 1.4 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Dmelanogaster.UCSC.dm6-seed text/plain root:root 0o644 1.7 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer10-seed text/plain root:root 0o644 2.0 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer10-tools/ root:root 0o755
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer10-tools/sort_danRer10.2bit.R text/plain root:root 0o644 607 bytes
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer5-seed text/plain root:root 0o644 1.9 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer5-tools/ root:root 0o755
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer5-tools/NOTES.TXT text/plain root:root 0o644 229 bytes
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer5-tools/splitbigfasta.sh text/x-shellscript root:root 0o755 1.8 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer5.masked-seed text/plain root:root 0o644 1.4 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer6-seed text/plain root:root 0o644 1.9 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer6-tools/ root:root 0o755
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer6-tools/NOTES.TXT text/plain root:root 0o644 230 bytes
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer6-tools/splitbigfasta.R text/plain root:root 0o644 1.1 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer6.masked-seed text/plain root:root 0o644 1.4 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer7-seed text/plain root:root 0o644 1.9 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer7-tools/ root:root 0o755
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer7-tools/NOTES.TXT text/plain root:root 0o644 227 bytes
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer7-tools/splitbigfasta.R text/plain root:root 0o644 1.1 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer7.masked-seed text/plain root:root 0o644 1.4 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Ecoli.NCBI.20080805-seed text/plain root:root 0o644 6.7 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Gaculeatus.UCSC.gasAcu1-seed text/plain root:root 0o644 2.0 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Gaculeatus.UCSC.gasAcu1.masked-seed text/plain root:root 0o644 1.5 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Ggallus.UCSC.galGal3-seed text/plain root:root 0o644 2.0 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Ggallus.UCSC.galGal3.masked-seed text/plain root:root 0o644 1.4 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Ggallus.UCSC.galGal4-seed text/plain root:root 0o644 1.9 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Ggallus.UCSC.galGal4-tools/ root:root 0o755
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Ggallus.UCSC.galGal4-tools/splitbigfasta.R text/plain root:root 0o644 1.1 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Ggallus.UCSC.galGal4.masked-seed text/plain root:root 0o644 1.4 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Ggallus.UCSC.galGal5-seed text/plain root:root 0o644 827 bytes
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Ggallus.UCSC.galGal5-tools/ root:root 0o755
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Ggallus.UCSC.galGal5-tools/sort_galGal5.2bit.R text/plain root:root 0o644 1015 bytes
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Hsapiens.NCBI.GRCh38-seed text/plain root:root 0o644 10.4 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Hsapiens.NCBI.GRCh38-tools/ root:root 0o755
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Hsapiens.NCBI.GRCh38-tools/splitbigfasta.R text/plain root:root 0o644 961 bytes
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Hsapiens.UCSC.hg17-seed text/plain root:root 0o644 1.9 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Hsapiens.UCSC.hg17.masked-seed text/plain root:root 0o644 1.3 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Hsapiens.UCSC.hg18-seed text/plain root:root 0o644 2.0 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Hsapiens.UCSC.hg18.masked-seed text/plain root:root 0o644 1.3 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Hsapiens.UCSC.hg19-seed text/plain root:root 0o644 2.4 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Hsapiens.UCSC.hg19.masked-seed text/plain root:root 0o644 1.3 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Hsapiens.UCSC.hg38-seed text/plain root:root 0o644 2.2 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Hsapiens.UCSC.hg38.masked-seed text/plain root:root 0o644 1.4 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Mfascicularis.NCBI.5.0-seed text/plain root:root 0o644 1.7 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Mfascicularis.NCBI.5.0-tools/ root:root 0o755
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Mfascicularis.NCBI.5.0-tools/fasta_to_sorted2bit.R text/plain root:root 0o644 1.3 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Mfuro.UCSC.musFur1-seed text/plain root:root 0o644 851 bytes
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Mmulatta.UCSC.rheMac2-seed text/plain root:root 0o644 1.9 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Mmulatta.UCSC.rheMac2.masked-seed text/plain root:root 0o644 2.0 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Mmulatta.UCSC.rheMac3-seed text/plain root:root 0o644 1.9 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Mmulatta.UCSC.rheMac3-tools/ root:root 0o755
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Mmulatta.UCSC.rheMac3-tools/splitbigfasta.R text/plain root:root 0o644 668 bytes
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Mmulatta.UCSC.rheMac3.masked-seed text/plain root:root 0o644 1.4 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Mmulatta.UCSC.rheMac8-seed text/plain root:root 0o644 852 bytes
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Mmulatta.UCSC.rheMac8-tools/ root:root 0o755
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Mmulatta.UCSC.rheMac8-tools/sort_rheMac8.2bit.R text/plain root:root 0o644 700 bytes
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Mmusculus.UCSC.mm10-seed text/plain root:root 0o644 3.7 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Mmusculus.UCSC.mm10.masked-seed text/plain root:root 0o644 1.0 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Mmusculus.UCSC.mm8-seed text/plain root:root 0o644 1.9 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Mmusculus.UCSC.mm8.masked-seed text/plain root:root 0o644 1.3 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Mmusculus.UCSC.mm9-seed text/plain root:root 0o644 1.9 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Mmusculus.UCSC.mm9.masked-seed text/plain root:root 0o644 1.3 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Ptroglodytes.UCSC.panTro2-seed text/plain root:root 0o644 2.0 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Ptroglodytes.UCSC.panTro2.masked-seed text/plain root:root 0o644 1.4 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Ptroglodytes.UCSC.panTro3-seed text/plain root:root 0o644 2.0 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Ptroglodytes.UCSC.panTro3-tools/ root:root 0o755
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Ptroglodytes.UCSC.panTro3-tools/splitbigfasta.R text/plain root:root 0o644 903 bytes
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Ptroglodytes.UCSC.panTro3.masked-seed text/plain root:root 0o644 1.5 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Ptroglodytes.UCSC.panTro5-seed text/plain root:root 0o644 836 bytes
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Ptroglodytes.UCSC.panTro5-tools/ root:root 0o755
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Ptroglodytes.UCSC.panTro5-tools/sort_panTro5.2bit.R text/plain root:root 0o644 1014 bytes
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Rnorvegicus.UCSC.rn4-seed text/plain root:root 0o644 1.9 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Rnorvegicus.UCSC.rn4.masked-seed text/plain root:root 0o644 1.3 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Rnorvegicus.UCSC.rn5-seed text/plain root:root 0o644 1.9 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Rnorvegicus.UCSC.rn5-tools/ root:root 0o755
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Rnorvegicus.UCSC.rn5-tools/splitbigfasta.R text/plain root:root 0o644 1.0 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Rnorvegicus.UCSC.rn5.masked-seed text/plain root:root 0o644 1.4 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Rnorvegicus.UCSC.rn6-seed text/plain root:root 0o644 1.7 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Scerevisiae.UCSC.sacCer1-seed text/plain root:root 0o644 870 bytes
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Scerevisiae.UCSC.sacCer2-seed text/plain root:root 0o644 996 bytes
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Scerevisiae.UCSC.sacCer3-seed text/plain root:root 0o644 971 bytes
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Sscrofa.UCSC.susScr3-seed text/plain root:root 0o644 878 bytes
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Sscrofa.UCSC.susScr3-tools/ root:root 0o755
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Sscrofa.UCSC.susScr3-tools/splitbigfasta.R text/plain root:root 0o644 864 bytes
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Sscrofa.UCSC.susScr3.masked-seed text/plain root:root 0o644 1.4 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Tguttata.UCSC.taeGut1-seed text/plain root:root 0o644 986 bytes
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Tguttata.UCSC.taeGut1.masked-seed text/plain root:root 0o644 1.1 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Tguttata.UCSC.taeGut2-seed text/plain root:root 0o644 855 bytes
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Tguttata.UCSC.taeGut2-tools/ root:root 0o755
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.Tguttata.UCSC.taeGut2-tools/sort_taeGut2.2bit.R text/plain root:root 0o644 925 bytes
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/BSgenome.influenza.NCBI.20100628-seed text/plain root:root 0o644 746 bytes
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/ForgeAll.R text/plain root:root 0o644 3.8 KB
/usr/lib/R/site-library/BSgenome/extdata/GentlemanLab/bump_seed_version.sh text/x-shellscript root:root 0o755 303 bytes
/usr/lib/R/site-library/BSgenome/extdata/ce2chrM.fa.gz application/gzip root:root 0o644 4.2 KB
/usr/lib/R/site-library/BSgenome/extdata/ce2chrX.fa.gz application/gzip root:root 0o644 5.2 MB
/usr/lib/R/site-library/BSgenome/extdata/ce2dict0.fa text/plain root:root 0o644 1.6 KB