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1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 | Package: biomaRt
Version: 2.34.1
Title: Interface to BioMart databases (e.g. Ensembl, COSMIC, Wormbase
and Gramene)
Authors@R: c(person("Steffen", "Durinck", role = c("aut"),
email = "biomartdev@gmail.com"),
person("Wolfgang", "Huber", role="aut"),
person("Sean", "Davis", role="ctb", email = "sdavis2@mail.nih.gov"),
person("Francois", "Pepin", role="ctb"),
person(given = "Vince S", family = "Buffalo", role="ctb"),
person("Mike", "Smith", role=c("ctb", "cre"),
email = "grimbough@gmail.com"))
Depends: methods
Imports: utils, XML, RCurl, AnnotationDbi, progress, stringr, httr
Suggests: annotate, BiocStyle, knitr, rmarkdown, testthat
VignetteBuilder: knitr
biocViews: Annotation
Description: In recent years a wealth of biological data has become available
in public data repositories. Easy access to these valuable data
resources and firm integration with data analysis is needed for
comprehensive bioinformatics data analysis. biomaRt provides an
interface to a growing collection of databases implementing the
BioMart software suite (http://www.biomart.org). The package enables
retrieval of large amounts of data in a uniform way without the need to
know the underlying database schemas or write complex SQL queries.
Examples of BioMart databases are Ensembl, COSMIC, Uniprot, HGNC,
Gramene, Wormbase and dbSNP mapped to Ensembl. These major databases
give biomaRt users direct access to a diverse set of data and enable
a wide range of powerful online queries from gene annotation to
database mining.
License: Artistic-2.0
LazyLoad: yes
NeedsCompilation: no
Packaged: 2017-12-14 23:22:41 UTC; biocbuild
Author: Steffen Durinck [aut],
Wolfgang Huber [aut],
Sean Davis [ctb],
Francois Pepin [ctb],
Vince S Buffalo [ctb],
Mike Smith [ctb, cre]
Maintainer: Mike Smith <grimbough@gmail.com>
Built: R 3.4.3; ; 'Thu, 01 Mar 2018 00:19:29 +0100'; unix
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