This file is indexed.

/usr/lib/python3/dist-packages/ipykernel/zmqshell.py is in python3-ipykernel 4.8.2-2.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
# -*- coding: utf-8 -*-
"""A ZMQ-based subclass of InteractiveShell.

This code is meant to ease the refactoring of the base InteractiveShell into
something with a cleaner architecture for 2-process use, without actually
breaking InteractiveShell itself.  So we're doing something a bit ugly, where
we subclass and override what we want to fix.  Once this is working well, we
can go back to the base class and refactor the code for a cleaner inheritance
implementation that doesn't rely on so much monkeypatching.

But this lets us maintain a fully working IPython as we develop the new
machinery.  This should thus be thought of as scaffolding.
"""

# Copyright (c) IPython Development Team.
# Distributed under the terms of the Modified BSD License.

from __future__ import print_function

import os
import sys
import time
import warnings
from threading import local

from tornado import ioloop

from IPython.core.interactiveshell import (
    InteractiveShell, InteractiveShellABC
)
from IPython.core import page
from IPython.core.autocall import ZMQExitAutocall
from IPython.core.displaypub import DisplayPublisher
from IPython.core.error import UsageError
from IPython.core.magics import MacroToEdit, CodeMagics
from IPython.core.magic import magics_class, line_magic, Magics
from IPython.core import payloadpage
from IPython.core.usage import default_banner
from IPython.display import display, Javascript
from ipykernel import (
    get_connection_file, get_connection_info, connect_qtconsole
)
from IPython.utils import openpy
from ipykernel.jsonutil import json_clean, encode_images
from IPython.utils.process import arg_split
from ipython_genutils import py3compat
from ipython_genutils.py3compat import unicode_type
from traitlets import (
    Instance, Type, Dict, CBool, CBytes, Any, default, observe
)
from ipykernel.displayhook import ZMQShellDisplayHook

from jupyter_core.paths import jupyter_runtime_dir
from jupyter_client.session import extract_header, Session

#-----------------------------------------------------------------------------
# Functions and classes
#-----------------------------------------------------------------------------

class ZMQDisplayPublisher(DisplayPublisher):
    """A display publisher that publishes data using a ZeroMQ PUB socket."""

    session = Instance(Session, allow_none=True)
    pub_socket = Any(allow_none=True)
    parent_header = Dict({})
    topic = CBytes(b'display_data')

    # thread_local:
    # An attribute used to ensure the correct output message
    # is processed. See ipykernel Issue 113 for a discussion.
    _thread_local = Any()

    def set_parent(self, parent):
        """Set the parent for outbound messages."""
        self.parent_header = extract_header(parent)

    def _flush_streams(self):
        """flush IO Streams prior to display"""
        sys.stdout.flush()
        sys.stderr.flush()

    @default('_thread_local')
    def _default_thread_local(self):
        """Initialize our thread local storage"""
        return local()

    @property
    def _hooks(self):
        if not hasattr(self._thread_local, 'hooks'):
            # create new list for a new thread
            self._thread_local.hooks = []
        return self._thread_local.hooks

    def publish(self, data, metadata=None, source=None, transient=None,
        update=False,
    ):
        """Publish a display-data message

        Parameters
        ----------
        data: dict
            A mime-bundle dict, keyed by mime-type.
        metadata: dict, optional
            Metadata associated with the data.
        transient: dict, optional, keyword-only
            Transient data that may only be relevant during a live display,
            such as display_id.
            Transient data should not be persisted to documents.
        update: bool, optional, keyword-only
            If True, send an update_display_data message instead of display_data.
        """
        self._flush_streams()
        if metadata is None:
            metadata = {}
        if transient is None:
            transient = {}
        self._validate_data(data, metadata)
        content = {}
        content['data'] = encode_images(data)
        content['metadata'] = metadata
        content['transient'] = transient

        msg_type = 'update_display_data' if update else 'display_data'

        # Use 2-stage process to send a message,
        # in order to put it through the transform
        # hooks before potentially sending.
        msg = self.session.msg(
            msg_type, json_clean(content),
            parent=self.parent_header
        )

        # Each transform either returns a new
        # message or None. If None is returned,
        # the message has been 'used' and we return.
        for hook in self._hooks:
            msg = hook(msg)
            if msg is None:
                return

        self.session.send(
            self.pub_socket, msg, ident=self.topic,
        )

    def clear_output(self, wait=False):
        """Clear output associated with the current execution (cell).

        Parameters
        ----------
        wait: bool (default: False)
            If True, the output will not be cleared immediately,
            instead waiting for the next display before clearing.
            This reduces bounce during repeated clear & display loops.

        """
        content = dict(wait=wait)
        self._flush_streams()
        self.session.send(
            self.pub_socket, u'clear_output', content,
            parent=self.parent_header, ident=self.topic,
        )

    def register_hook(self, hook):
        """
        Registers a hook with the thread-local storage.

        Parameters
        ----------
        hook : Any callable object

        Returns
        -------
        Either a publishable message, or `None`.

        The DisplayHook objects must return a message from
        the __call__ method if they still require the
        `session.send` method to be called after tranformation.
        Returning `None` will halt that execution path, and
        session.send will not be called.
        """
        self._hooks.append(hook)

    def unregister_hook(self, hook):
        """
        Un-registers a hook with the thread-local storage.

        Parameters
        ----------
        hook: Any callable object which has previously been
              registered as a hook.

        Returns
        -------
        bool - `True` if the hook was removed, `False` if it wasn't
               found.
        """
        try:
            self._hooks.remove(hook)
            return True
        except ValueError:
            return False


@magics_class
class KernelMagics(Magics):
    #------------------------------------------------------------------------
    # Magic overrides
    #------------------------------------------------------------------------
    # Once the base class stops inheriting from magic, this code needs to be
    # moved into a separate machinery as well.  For now, at least isolate here
    # the magics which this class needs to implement differently from the base
    # class, or that are unique to it.

    _find_edit_target = CodeMagics._find_edit_target

    @line_magic
    def edit(self, parameter_s='', last_call=['','']):
        """Bring up an editor and execute the resulting code.

        Usage:
          %edit [options] [args]

        %edit runs an external text editor. You will need to set the command for
        this editor via the ``TerminalInteractiveShell.editor`` option in your
        configuration file before it will work.

        This command allows you to conveniently edit multi-line code right in
        your IPython session.

        If called without arguments, %edit opens up an empty editor with a
        temporary file and will execute the contents of this file when you
        close it (don't forget to save it!).

        Options:

        -n <number>
          Open the editor at a specified line number. By default, the IPython
          editor hook uses the unix syntax 'editor +N filename', but you can
          configure this by providing your own modified hook if your favorite
          editor supports line-number specifications with a different syntax.

        -p
          Call the editor with the same data as the previous time it was used,
          regardless of how long ago (in your current session) it was.

        -r
          Use 'raw' input. This option only applies to input taken from the
          user's history.  By default, the 'processed' history is used, so that
          magics are loaded in their transformed version to valid Python.  If
          this option is given, the raw input as typed as the command line is
          used instead.  When you exit the editor, it will be executed by
          IPython's own processor.

        Arguments:

        If arguments are given, the following possibilites exist:

        - The arguments are numbers or pairs of colon-separated numbers (like
          1 4:8 9). These are interpreted as lines of previous input to be
          loaded into the editor. The syntax is the same of the %macro command.

        - If the argument doesn't start with a number, it is evaluated as a
          variable and its contents loaded into the editor. You can thus edit
          any string which contains python code (including the result of
          previous edits).

        - If the argument is the name of an object (other than a string),
          IPython will try to locate the file where it was defined and open the
          editor at the point where it is defined. You can use ``%edit function``
          to load an editor exactly at the point where 'function' is defined,
          edit it and have the file be executed automatically.

          If the object is a macro (see %macro for details), this opens up your
          specified editor with a temporary file containing the macro's data.
          Upon exit, the macro is reloaded with the contents of the file.

          Note: opening at an exact line is only supported under Unix, and some
          editors (like kedit and gedit up to Gnome 2.8) do not understand the
          '+NUMBER' parameter necessary for this feature. Good editors like
          (X)Emacs, vi, jed, pico and joe all do.

        - If the argument is not found as a variable, IPython will look for a
          file with that name (adding .py if necessary) and load it into the
          editor. It will execute its contents with execfile() when you exit,
          loading any code in the file into your interactive namespace.

        Unlike in the terminal, this is designed to use a GUI editor, and we do
        not know when it has closed. So the file you edit will not be
        automatically executed or printed.

        Note that %edit is also available through the alias %ed.
        """

        opts,args = self.parse_options(parameter_s, 'prn:')

        try:
            filename, lineno, _ = CodeMagics._find_edit_target(self.shell, args, opts, last_call)
        except MacroToEdit:
            # TODO: Implement macro editing over 2 processes.
            print("Macro editing not yet implemented in 2-process model.")
            return

        # Make sure we send to the client an absolute path, in case the working
        # directory of client and kernel don't match
        filename = os.path.abspath(filename)

        payload = {
            'source' : 'edit_magic',
            'filename' : filename,
            'line_number' : lineno
        }
        self.shell.payload_manager.write_payload(payload)

    # A few magics that are adapted to the specifics of using pexpect and a
    # remote terminal

    @line_magic
    def clear(self, arg_s):
        """Clear the terminal."""
        if os.name == 'posix':
            self.shell.system("clear")
        else:
            self.shell.system("cls")

    if os.name == 'nt':
        # This is the usual name in windows
        cls = line_magic('cls')(clear)

    # Terminal pagers won't work over pexpect, but we do have our own pager

    @line_magic
    def less(self, arg_s):
        """Show a file through the pager.

        Files ending in .py are syntax-highlighted."""
        if not arg_s:
            raise UsageError('Missing filename.')

        if arg_s.endswith('.py'):
            cont = self.shell.pycolorize(openpy.read_py_file(arg_s, skip_encoding_cookie=False))
        else:
            cont = open(arg_s).read()
        page.page(cont)

    more = line_magic('more')(less)

    # Man calls a pager, so we also need to redefine it
    if os.name == 'posix':
        @line_magic
        def man(self, arg_s):
            """Find the man page for the given command and display in pager."""
            page.page(self.shell.getoutput('man %s | col -b' % arg_s,
                                           split=False))

    @line_magic
    def connect_info(self, arg_s):
        """Print information for connecting other clients to this kernel

        It will print the contents of this session's connection file, as well as
        shortcuts for local clients.

        In the simplest case, when called from the most recently launched kernel,
        secondary clients can be connected, simply with:

        $> jupyter <app> --existing

        """

        try:
            connection_file = get_connection_file()
            info = get_connection_info(unpack=False)
        except Exception as e:
            warnings.warn("Could not get connection info: %r" % e)
            return

        # if it's in the default dir, truncate to basename
        if jupyter_runtime_dir() == os.path.dirname(connection_file):
            connection_file = os.path.basename(connection_file)


        print (info + '\n')
        print ("Paste the above JSON into a file, and connect with:\n"
            "    $> jupyter <app> --existing <file>\n"
            "or, if you are local, you can connect with just:\n"
            "    $> jupyter <app> --existing {0}\n"
            "or even just:\n"
            "    $> jupyter <app> --existing\n"
            "if this is the most recent Jupyter kernel you have started.".format(
            connection_file
            )
        )

    @line_magic
    def qtconsole(self, arg_s):
        """Open a qtconsole connected to this kernel.

        Useful for connecting a qtconsole to running notebooks, for better
        debugging.
        """

        # %qtconsole should imply bind_kernel for engines:
        # FIXME: move to ipyparallel Kernel subclass
        if 'ipyparallel' in sys.modules:
            from ipyparallel import bind_kernel
            bind_kernel()

        try:
            connect_qtconsole(argv=arg_split(arg_s, os.name=='posix'))
        except Exception as e:
            warnings.warn("Could not start qtconsole: %r" % e)
            return

    @line_magic
    def autosave(self, arg_s):
        """Set the autosave interval in the notebook (in seconds).

        The default value is 120, or two minutes.
        ``%autosave 0`` will disable autosave.

        This magic only has an effect when called from the notebook interface.
        It has no effect when called in a startup file.
        """

        try:
            interval = int(arg_s)
        except ValueError:
            raise UsageError("%%autosave requires an integer, got %r" % arg_s)

        # javascript wants milliseconds
        milliseconds = 1000 * interval
        display(Javascript("IPython.notebook.set_autosave_interval(%i)" % milliseconds),
            include=['application/javascript']
        )
        if interval:
            print("Autosaving every %i seconds" % interval)
        else:
            print("Autosave disabled")


class ZMQInteractiveShell(InteractiveShell):
    """A subclass of InteractiveShell for ZMQ."""

    displayhook_class = Type(ZMQShellDisplayHook)
    display_pub_class = Type(ZMQDisplayPublisher)
    data_pub_class = Type('ipykernel.datapub.ZMQDataPublisher')
    kernel = Any()
    parent_header = Any()

    @default('banner1')
    def _default_banner1(self):
        return default_banner

    # Override the traitlet in the parent class, because there's no point using
    # readline for the kernel. Can be removed when the readline code is moved
    # to the terminal frontend.
    colors_force = CBool(True)
    readline_use = CBool(False)
    # autoindent has no meaning in a zmqshell, and attempting to enable it
    # will print a warning in the absence of readline.
    autoindent = CBool(False)

    exiter = Instance(ZMQExitAutocall)

    @default('exiter')
    def _default_exiter(self):
        return ZMQExitAutocall(self)

    @observe('exit_now')
    def _update_exit_now(self, change):
        """stop eventloop when exit_now fires"""
        if change['new']:
            loop = self.kernel.io_loop
            loop.call_later(0.1, loop.stop)
            if self.kernel.eventloop:
                exit_hook = getattr(self.kernel.eventloop, 'exit_hook', None)
                if exit_hook:
                    exit_hook(self.kernel)

    keepkernel_on_exit = None

    # Over ZeroMQ, GUI control isn't done with PyOS_InputHook as there is no
    # interactive input being read; we provide event loop support in ipkernel
    def enable_gui(self, gui):
        from .eventloops import enable_gui as real_enable_gui
        try:
            real_enable_gui(gui)
            self.active_eventloop = gui
        except ValueError as e:
            raise UsageError("%s" % e)

    def init_environment(self):
        """Configure the user's environment."""
        env = os.environ
        # These two ensure 'ls' produces nice coloring on BSD-derived systems
        env['TERM'] = 'xterm-color'
        env['CLICOLOR'] = '1'
        # Since normal pagers don't work at all (over pexpect we don't have
        # single-key control of the subprocess), try to disable paging in
        # subprocesses as much as possible.
        env['PAGER'] = 'cat'
        env['GIT_PAGER'] = 'cat'

    def init_hooks(self):
        super(ZMQInteractiveShell, self).init_hooks()
        self.set_hook('show_in_pager', page.as_hook(payloadpage.page), 99)

    def init_data_pub(self):
        """Delay datapub init until request, for deprecation warnings"""
        pass

    @property
    def data_pub(self):
        if not hasattr(self, '_data_pub'):
            warnings.warn("InteractiveShell.data_pub is deprecated outside IPython parallel.",
                DeprecationWarning, stacklevel=2)

            self._data_pub = self.data_pub_class(parent=self)
            self._data_pub.session = self.display_pub.session
            self._data_pub.pub_socket = self.display_pub.pub_socket
        return self._data_pub

    @data_pub.setter
    def data_pub(self, pub):
        self._data_pub = pub

    def ask_exit(self):
        """Engage the exit actions."""
        self.exit_now = (not self.keepkernel_on_exit)
        payload = dict(
            source='ask_exit',
            keepkernel=self.keepkernel_on_exit,
            )
        self.payload_manager.write_payload(payload)

    def run_cell(self, *args, **kwargs):
        self._last_traceback = None
        return super(ZMQInteractiveShell, self).run_cell(*args, **kwargs)

    def _showtraceback(self, etype, evalue, stb):
        # try to preserve ordering of tracebacks and print statements
        sys.stdout.flush()
        sys.stderr.flush()

        exc_content = {
            u'traceback' : stb,
            u'ename' : unicode_type(etype.__name__),
            u'evalue' : py3compat.safe_unicode(evalue),
        }

        dh = self.displayhook
        # Send exception info over pub socket for other clients than the caller
        # to pick up
        topic = None
        if dh.topic:
            topic = dh.topic.replace(b'execute_result', b'error')

        exc_msg = dh.session.send(dh.pub_socket, u'error', json_clean(exc_content),
                                  dh.parent_header, ident=topic)

        # FIXME - Once we rely on Python 3, the traceback is stored on the
        # exception object, so we shouldn't need to store it here.
        self._last_traceback = stb

    def set_next_input(self, text, replace=False):
        """Send the specified text to the frontend to be presented at the next
        input cell."""
        payload = dict(
            source='set_next_input',
            text=text,
            replace=replace,
        )
        self.payload_manager.write_payload(payload)

    def set_parent(self, parent):
        """Set the parent header for associating output with its triggering input"""
        self.parent_header = parent
        self.displayhook.set_parent(parent)
        self.display_pub.set_parent(parent)
        if hasattr(self, '_data_pub'):
            self.data_pub.set_parent(parent)
        try:
            sys.stdout.set_parent(parent)
        except AttributeError:
            pass
        try:
            sys.stderr.set_parent(parent)
        except AttributeError:
            pass

    def get_parent(self):
        return self.parent_header

    def init_magics(self):
        super(ZMQInteractiveShell, self).init_magics()
        self.register_magics(KernelMagics)
        self.magics_manager.register_alias('ed', 'edit')

    def init_virtualenv(self):
        # Overridden not to do virtualenv detection, because it's probably
        # not appropriate in a kernel. To use a kernel in a virtualenv, install
        # it inside the virtualenv.
        # https://ipython.readthedocs.io/en/latest/install/kernel_install.html
        pass


InteractiveShellABC.register(ZMQInteractiveShell)