/usr/share/psychtoolbox-3/PsychLinuxConfiguration.m is in psychtoolbox-3-common 3.0.14.20170103+git6-g605ff5c.dfsg1-1build1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
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% PsychLinuxConfiguration([answers]) -- Optimize setup of Linux system.
%
% This script modifies system settings and configuration files
% to optimize a Linux system for use with Psychtoolbox.
%
% Currently it modifies files to allow to run Octave or Matlab
% as regular non-root user, ie. without need for root login or
% the "sudo" command. It does so by changing file permissions
% and resource usage limits to allow a regular user application
% to switch to realtime scheduling, lock its memory, and to
% access special purpose hardware like GPUs, Bits+, Datapixx and
% other research equipment.
%
% Realtime optimizations are achieved by extending the
% /etc/security/limits.conf file with entries that allow
% members of the Unix user group "psychtoolbox" to lock
% application memory into physical RAM, eliminating/minimizing
% interference from the VM subsystem, and to run with realtime
% priorities up to level 50. The group "psychtoolbox" is created
% if it does not already exist.
%
% If the target system has a /etc/security/limits.d/ directory,
% then a separate rule file is stored to that directory to
% achieve the change without messing around with the limits.conf
% file.
%
% root-less hardware access is achieved by copying a special
% psychtoolbox.rules file into the /etc/udev/rules.d/ directory.
% This udev rules file contains rules to auto-detect certain
% hardware at bootup or when the hw is hot-plugged and to
% reconfigure this hw or access permission for root-less access
% by Psychtoolbox, and for optimal performance for the kind
% of typical PTB use cases.
%
% The script also creates a /etc/X11/xorg.conf.d/ directory for
% xorg.conf configuration files which are writable by members
% of the 'psychtoolbox' group to allow easy reconfiguration of
% the X11 display system for running experiment sessions.
%
% The script calls into the shell via "sudo" to achieve this
% setup task, which itself needs admin privileges to modify
% system files etc. "sudo" will prompt the user for his admin
% password to complete the tasks. This does not work on Octave
% with GUI though. You will need octave --no-gui to execute this
% script once if you use octave.
%
% The script also checks if any special configuration is required
% to work around Linux specific OpenGL quirks of Matlab R2014b or
% later.
%
% History:
% 6.01.2012 mk Written.
% 16.04.2013 mk Add info about 'dialout' group for serial port access.
% 25.01.2015 mk Add Matlab R2014b OpenGL reconfiguration.
% 20.10.2015 mk Make sudo handling under Octave+GUI less confusing.
% 20.10.2015 mk Trigger auto-reload and coldplug of udev devices via udevadm.
% 25.10.2015 mk Remember y/n answers to allow quicker reexec of the command if
% reexecution is needed from octave-cli or as admin user.
% Add option to automatically add user to dialout and psychtoolbox
% Unix user groups, and to add other optional users as well.
% Allow upgrade of the 99-psychtoolbox.limits conf file as well.
% 04.11.2015 mk Support creation of /etc/X11/xorg.conf.d/ directory owned by
% group 'psychtoolbox' with setgid flag set, and write permissions,
% to allow members of the 'psychtoolbox' user group to add/remove/
% modify xorg.conf files without need for admin permissions.
% 27.06.2016 mk Optionally install a /etc/modprobe.d/blacklist-psychtoolbox.conf
% file to prevent loading of certain kernel modules, e.g., the 'lp'
% module for control of parallel port line printers, which would prevent
% exclusive access to parallel ports for digital i/o.
% Also add users to the 'lp' group for parallel port access, and
% on ARM architecture (RaspberryPi) to the 'gpio' group for GPIO
% pin access.
% 04.09.2016 mk Optionally install a /etc/modprobe.d/amddeepcolor-psychtoolbox.conf
% file to switch radeon-kms / amdgpu-kms into deep color mode for
% driving suitable HDMI/DP > 8 bpc displays.
rerun = 0;
updateinitramfs = 0;
if ~IsLinux
return;
end
if nargin < 1 || isempty(answers)
answers = '??????';
else
if ~ischar(answers) || length(answers) ~= 6
error('Provided input argument ''answers'' must be a 6 character string with characters y, n or ?');
end
end
% Retrieve login username of current user:
[ignore, username] = system('whoami'); %#ok<ASGLU>
username = username(1:end-1);
addgroup = 0;
% Setup of /etc/udev/rules.d/psychtoolbox.rules file, if needed:
% Assume no need to install or update:
needinstall = 0;
fprintf('\n\nLinux specific system setup for running Psychtoolbox as non-root user:\n');
fprintf('You need to be a user with administrative rights for this function to succeed.\n');
fprintf('If you don''t have administrator rights, or if you don''t trust this script to\n');
fprintf('tinker around with system settings, simply answer all questions with "n" for "No"\n');
fprintf('and then call a system administrator for help.\n\n');
fprintf('Checking if the Psychtoolbox udev rules file is installed and up to date.\n');
fprintf('This file will allow Psychtoolbox to access special research hardware equipment,\n');
fprintf('e.g., the Cambridge Research Systems Bits+ box, the Datapixx from VPixx, response\n');
fprintf('button boxes, and some special features of your graphics card, e.g., high precision\n');
fprintf('timestamping. You will be able to access this hardware without the need to run\n');
fprintf('Matlab or Octave as sudo root user.\n\n');
% Check if udev psychtoolbox.rules file exists:
if ~exist('/etc/udev/rules.d/psychtoolbox.rules', 'file')
% No: Needs to be installed.
needinstall = 1;
fprintf('The udev rules file for Psychtoolbox is not installed on your system.\n');
if ismember(answers(1), 'yn')
answer = answers(1);
else
answer = input('Should i install it? [y/n] : ', 's');
answers(1) = answer;
end
else
% Yes.
fprintf('The udev rules file for Psychtoolbox is already installed on your system.\n');
% Compare its modification date with the one in PTB:
r = dir([PsychtoolboxRoot '/PsychBasic/psychtoolbox.rules']);
i = dir('/etc/udev/rules.d/psychtoolbox.rules');
if r.datenum > i.datenum
needinstall = 2;
fprintf('However, it seems to be outdated. I have a more recent version with me.\n');
if ismember(answers(1), 'yn')
answer = answers(1);
else
answer = input('Should i update it? [y/n] : ', 's');
answers(1) = answer;
end
end
end
if needinstall && answer == 'y'
if IsOctave && IsGUI
rerun = 1;
fprintf('Oops, we are running under Octave in GUI mode. This will not work!\n');
fprintf('But not to worry. Just run Octave from a terminal window later once without\n');
fprintf('GUI, e.g., via executing: octave --no-gui\n');
fprintf('Then run the PsychLinuxConfiguration command again to make things work.\n');
else
fprintf('I will copy my most recent rules file to your system. Please enter\n');
fprintf('now your system administrator password. You will not see any feedback.\n');
drawnow;
cmd = sprintf('sudo cp %s/PsychBasic/psychtoolbox.rules /etc/udev/rules.d/', PsychtoolboxRoot);
[rc, msg] = system(cmd);
if rc == 0
fprintf('Success! Trying to apply the new rules file.\n');
else
fprintf('Failed! The error message was: %s\n', msg);
end
if rc == 0
% Call udevadm to try to trigger a reload of the new rules file and trigger
% a redetection of devices to apply the new rules without need for a reboot:
cmd = sprintf('sudo udevadm control --reload ; sudo udevadm trigger');
[rc, msg] = system(cmd);
if rc == 0
fprintf('Success! You may need to reboot your machine for some changes to take effect.\n');
else
fprintf('Failed! The error message was: %s\n', msg);
end
end
end
end
% Check if psychtoolbox modules blacklist file exists:
fprintf('\n\n');
if ~exist('/etc/modprobe.d/blacklist-psychtoolbox.conf', 'file')
% No: Needs to be installed.
needinstall = 1;
fprintf('The blacklist file for Psychtoolbox is not installed on your system.\n');
if ismember(answers(5), 'yn')
answer = answers(5);
else
answer = input('Should i install it? [y/n] : ', 's');
answers(5) = answer;
end
else
% Yes.
fprintf('The blacklist file for Psychtoolbox is already installed on your system.\n');
% Compare its modification date with the one in PTB:
r = dir([PsychtoolboxRoot '/PsychHardware/blacklist-psychtoolbox.conf']);
i = dir('/etc/modprobe.d/blacklist-psychtoolbox.conf');
if r.datenum > i.datenum
needinstall = 2;
fprintf('However, it seems to be outdated. I have a more recent version with me.\n');
if ismember(answers(5), 'yn')
answer = answers(5);
else
answer = input('Should i update it? [y/n] : ', 's');
answers(5) = answer;
end
end
end
if needinstall && answer == 'y'
if IsOctave && IsGUI
rerun = 1;
fprintf('Oops, we are running under Octave in GUI mode. This will not work!\n');
fprintf('But not to worry. Just run Octave from a terminal window later once without\n');
fprintf('GUI, e.g., via executing: octave --no-gui\n');
fprintf('Then run the PsychLinuxConfiguration command again to make things work.\n');
else
fprintf('I will copy my most recent blacklist file to your system. Please enter\n');
fprintf('now your system administrator password. You will not see any feedback.\n');
drawnow;
cmd = sprintf('sudo cp %s/PsychHardware/blacklist-psychtoolbox.conf /etc/modprobe.d/', PsychtoolboxRoot);
[rc, msg] = system(cmd);
if rc == 0
updateinitramfs = 1;
fprintf('Success! You may need to reboot your machine for some changes to take effect.\n');
else
fprintf('Failed! The error message was: %s\n', msg);
end
end
end
% Check if psychtoolbox AMD kms modules config file exists:
fprintf('\n\n');
if ~exist('/etc/modprobe.d/amddeepcolor-psychtoolbox.conf', 'file')
% No: Needs to be installed.
needinstall = 1;
fprintf('The amd deep color file for Psychtoolbox is not installed on your system.\n');
fprintf('This file needs to be installed if you want to use a graphics card from AMD\n');
fprintf('to drive a HDMI or DisplayPort high precision display device with more than\n');
fprintf('8 bpc color depths, ie. more than 256 levels of red, green and blue color.\n');
fprintf('You do not need to install it for pure 8 bpc mode or with other graphics cards.\n');
if ismember(answers(6), 'yn')
answer = answers(6);
else
answer = input('Should i install it? [y/n] : ', 's');
answers(6) = answer;
end
else
% Yes.
fprintf('The amd deep color file for Psychtoolbox is already installed on your system.\n');
% Compare its modification date with the one in PTB:
r = dir([PsychtoolboxRoot '/PsychHardware/amddeepcolor-psychtoolbox.conf']);
i = dir('/etc/modprobe.d/amddeepcolor-psychtoolbox.conf');
if r.datenum > i.datenum
needinstall = 2;
fprintf('However, it seems to be outdated. I have a more recent version with me.\n');
if ismember(answers(6), 'yn')
answer = answers(6);
else
answer = input('Should i update it? [y/n] : ', 's');
answers(6) = answer;
end
end
end
if needinstall && answer == 'y'
if IsOctave && IsGUI
rerun = 1;
fprintf('Oops, we are running under Octave in GUI mode. This will not work!\n');
fprintf('But not to worry. Just run Octave from a terminal window later once without\n');
fprintf('GUI, e.g., via executing: octave --no-gui\n');
fprintf('Then run the PsychLinuxConfiguration command again to make things work.\n');
else
fprintf('I will copy my most recent amd deep color file to your system. Please enter\n');
fprintf('now your system administrator password. You will not see any feedback.\n');
drawnow;
cmd = sprintf('sudo cp %s/PsychHardware/amddeepcolor-psychtoolbox.conf /etc/modprobe.d/', PsychtoolboxRoot);
[rc, msg] = system(cmd);
if rc == 0
updateinitramfs = 1;
fprintf('Success! You will need to reboot your machine for this change to take effect.\n');
else
fprintf('Failed! The error message was: %s\n', msg);
end
end
end
% First the fallback implementation if /etc/security/limits.d/ does not
% exist:
if ~exist('/etc/security/limits.d/', 'dir')
% Check if /etc/security/limits.conf has proper entries to allow memory locking
% and real-time scheduling:
fid = fopen('/etc/security/limits.conf');
if fid == -1
fprintf('Could not open /etc/security/limits.conf for reading. Can not set it up, sorry!\n');
return;
end
fprintf('\nChecking if /etc/security/limits.conf has entries which allow everyone to\n');
fprintf('make use of realtime scheduling and memory locking -- Needed for good timing.\n\n');
mlockok = 0;
rtpriook = 0;
while ~feof(fid)
fl = fgetl(fid);
% fprintf('%s\n', fl);
if fl == -1
continue;
end
if ~isempty(strfind(fl, 'memlock')) && ~isempty(strfind(fl, 'unlimited')) && ~isempty(strfind(fl, '@psychtoolbox')) && ~isempty(strfind(fl, '-'))
mlockok = 1;
end
if ~isempty(strfind(fl, 'rtprio')) && ~isempty(strfind(fl, '50')) && ~isempty(strfind(fl, '@psychtoolbox')) && ~isempty(strfind(fl, '-'))
rtpriook = 1;
end
end
% Done reading the file:
fclose(fid);
drawnow;
% ...and?
if ~(mlockok && rtpriook)
fprintf('\n\nThe file seems to be missing some suitable setup lines.\n');
if ismember(answers(2), 'yn')
answer = answers(2);
else
answer = input('Should i add them for you? [y/n] : ', 's');
answers(2) = answer;
end
if answer == 'y'
if IsOctave && IsGUI
rerun = 1;
fprintf('Oops, we are running under Octave in GUI mode. This will not work!\n');
fprintf('But not to worry. Just run Octave from a terminal window later once without\n');
fprintf('GUI, e.g., via executing: octave --no-gui\n');
fprintf('Then run the PsychLinuxConfiguration command again to make things work.\n');
else
fprintf('I will try to add config lines to your system. Please enter\n');
fprintf('now your system administrator password. You will not see any feedback.\n');
drawnow;
% Set amount of lockable memory to unlimited for all users:
[rc, msg] = system('sudo /bin/bash -c ''echo "@psychtoolbox - memlock unlimited" >> /etc/security/limits.conf''');
if rc ~= 0
fprintf('Failed! The error message was: %s\n', msg);
end
% Set allowable realtime priority for all users to 50:
[rc2, msg] = system('sudo /bin/bash -c ''echo "@psychtoolbox - rtprio 50" >> /etc/security/limits.conf''');
if rc2 ~= 0
fprintf('Failed! The error message was: %s\n', msg);
end
% Must add a psychtoolbox user group:
addgroup = 1;
if (rc == 0) && (rc2 == 0)
fprintf('\n\nSuccess!\n\n');
else
fprintf('\n\nFailed! Maybe ask a system administrator for help?\n\n');
end
end
end
else
fprintf('\n\nYour system is already setup for use of Priority().\n\n');
end
else
% Realtime setup for systems with /etc/security/limits.d/ directory:
% Simply install a ptb specific config file - a cleaner solution:
donttouchthis = 1;
if ~exist('/etc/security/limits.d/99-psychtoolboxlimits.conf', 'file')
donttouchthis = 0;
else
r = dir([PsychtoolboxRoot '/PsychBasic/99-psychtoolboxlimits.conf']);
i = dir('/etc/security/limits.d/99-psychtoolboxlimits.conf');
if r.datenum > i.datenum
donttouchthis = 0;
end
end
if ~donttouchthis
fprintf('\n\nThe file /etc/security/limits.d/99-psychtoolboxlimits.conf is\n');
fprintf('not yet installed or outdated on your system. It allows painless realtime operation.\n');
if ismember(answers(2), 'yn')
answer = answers(2);
else
answer = input('Should i install or upgrade to my most recent file for you? [y/n] : ', 's');
answers(2) = answer;
end
if answer == 'y'
if IsOctave && IsGUI
rerun = 1;
fprintf('Oops, we are running under Octave in GUI mode. This will not work!\n');
fprintf('But not to worry. Just run Octave from a terminal window later once without\n');
fprintf('GUI, e.g., via executing: octave --no-gui\n');
fprintf('Then run the PsychLinuxConfiguration command again to make things work.\n');
else
fprintf('I will try to install it now to your system. Please enter\n');
fprintf('now your system administrator password. You will not see any feedback.\n');
drawnow;
cmd = sprintf('sudo cp %s/PsychBasic/99-psychtoolboxlimits.conf /etc/security/limits.d/', PsychtoolboxRoot);
[rc, msg] = system(cmd);
if rc ~= 0
fprintf('Failed! The error message was: %s\n', msg);
else
fprintf('Success!\n\n');
% Must add a psychtoolbox user group:
addgroup = 1;
end
end
end
end
end
% Need to create a Unix user group 'psychtoolbox' and add user to it?
if addgroup
fprintf('I will try to create a new Unix user group called "psychtoolbox" on your system.\n');
if IsOctave && IsGUI
rerun = 1;
fprintf('Oops, we are running under Octave in GUI mode. This will not work!\n');
fprintf('But not to worry. Just run Octave from a terminal window later once without\n');
fprintf('GUI, e.g., via executing: octave --no-gui\n');
fprintf('Then run the PsychLinuxConfiguration command again to make things work.\n');
addgroup = 0;
else
% This will create the psychtoolbox user group, unless the group
% already exists. In such a case it simply does nothing:
system('sudo groupadd --force psychtoolbox');
fprintf('I have created a new Unix user group called "psychtoolbox" on your system.\n');
addgroup = 1;
end
else
fprintf('\n\nYour system has a Unix user group called "psychtoolbox".\n');
addgroup = 1;
end
if addgroup
fprintf('All members of that group can use the Priority() command now without the need\n');
fprintf('to run Matlab or Octave as sudo root user.\n\n');
fprintf('You need to add each user of Psychtoolbox to that group. You could do this\n');
fprintf('with the user management tools of your system. Or you can open a terminal window\n');
fprintf('and type the following command (here as an example to add yourself to that group):\n\n');
fprintf('sudo usermod -a -G psychtoolbox %s\n\n', username);
fprintf('One should also add oneself to the ''dialout'' group for access to serial port devices:\n\n');
fprintf('sudo usermod -a -G dialout %s\n\n', username);
fprintf('One should also add oneself to the ''lp'' group for access to parallel port devices:\n\n');
fprintf('sudo usermod -a -G lp %s\n\n', username);
fprintf('One should also add oneself to the ''video'' group for use on hybrid graphics laptops:\n\n');
fprintf('sudo usermod -a -G video %s\n\n', username);
if IsARM
fprintf('One should also add oneself to the ''gpio'' group for access to GPIO pins:\n\n');
fprintf('sudo usermod -a -G gpio %s\n\n', username);
end
fprintf('After that, the new group member must log out and then login again for the\n');
fprintf('settings to take effect.\n\n');
if ismember(answers(3), 'yn')
answer = answers(3);
else
fprintf('Actually we could do this for you right now.\n');
answer = input('Should i add you to the user groups proposed above? [y/n] : ', 's');
answers(3) = answer;
end
if answer == 'y'
againagain = 1;
while againagain
fprintf('\nAdding user %s to groups...\n', username);
cmd = sprintf('sudo usermod -a -G psychtoolbox %s', username);
system(cmd);
cmd = sprintf('sudo usermod -a -G dialout %s', username);
system(cmd);
cmd = sprintf('sudo usermod -a -G lp %s', username);
system(cmd);
cmd = sprintf('sudo usermod -a -G video %s', username);
system(cmd);
% On RaspberryPi also add to the gpio group for GPIO access:
if IsARM
cmd = sprintf('sudo usermod -a -G gpio %s', username);
system(cmd);
end
% Another one?
username = input('Enter the name of another user to add, or just press Return to be done: ', 's');
if isempty(username)
againagain = 0;
end
end
fprintf('\n');
end
end
if addgroup
if ~exist('/etc/X11/xorg.conf.d', 'dir')
fprintf('\n\nThe X11 configuration directory /etc/X11/xorg.conf.d does not exist.\n');
fprintf('I would like to create it and allow users of the psychtoolbox Unix group\n');
fprintf('to write xorg config files into that directory. This will allow easy change\n');
fprintf('of display configuration when needed to setup for an experiment by use of the\n');
fprintf('XOrgConfCreator and XOrgConfSelector functions of Psychtoolbox.\n\n');
if ismember(answers(4), 'yn')
answer = answers(4);
else
answer = input('Should i create a X11 config directory that is writable for you? [y/n] : ', 's');
answers(4) = answer;
end
if answer == 'y'
if IsOctave && IsGUI
rerun = 1;
fprintf('Oops, we are running under Octave in GUI mode. This will not work!\n');
fprintf('But not to worry. Just run Octave from a terminal window later once without\n');
fprintf('GUI, e.g., via executing: octave --no-gui\n');
fprintf('Then run the PsychLinuxConfiguration command again to make things work.\n');
else
system('sudo mkdir /etc/X11/xorg.conf.d');
system('sudo chown :psychtoolbox /etc/X11/xorg.conf.d');
system('sudo chmod g+rwxs /etc/X11/xorg.conf.d');
end
end
end
end
if updateinitramfs
fprintf('\nNow updating the initramfs for some settings to take effect. This can take some time.\n');
system('sudo update-initramfs -u -k all');
end
if ~rerun
fprintf('\nFinished. Your system should now be ready for use with Psychtoolbox.\n');
fprintf('If you encounter problems, try rebooting the machine. Some of the settings only\n');
fprintf('become effective after a reboot.\n\n\n');
else
fprintf('\nSetup failed due to lack of administrator permissions. Please run octave\n');
fprintf('from a terminal window via ''octave --no-gui'' while logged in as a user with\n');
fprintf('administrator capabilities.\n');
fprintf('Then execute the command\n\nPsychLinuxConfiguration(''%s'');\n\n', answers);
fprintf('to rerun this script again with the same settings, so you can avoid\n');
fprintf('answering all yes/no questions again. Then it should work.\n\n\n');
end
fprintf('Press Return key to continue.\n');
pause;
fprintf('\n\n\n');
% Matlab version 8.4 (R2014b) or later?
if ~IsOctave && exist('verLessThan') && ~verLessThan('matlab', '8.4.0')
% Yes: If R2014b detects a Mesa OpenGL renderer as default system OpenGL
% library, it will blacklist it and switch to its own utterly outdated
% Mesa X11 software renderer (Version 7.2 !!). This is utterly inadequate
% for our purpose, therefore lets reconfigure Matlab to force it to use the
% system provided hardware accelerated Mesa OpenGL library after the next
% Matlab restart.
d = opengl('data');
if (ischar(d.Software) && ~isempty(strfind(d.Software, 'true'))) || (isscalar(d.Software) && d.Software)
% Software renderer. Let's change this for future Matlab sessions:
opengl('save','hardware');
fprintf('Your version of Matlab R2014b or later was setup to use its own software OpenGL renderer.\n');
fprintf('As this is completely unsuitable for Psychtoolbox, i have changed the setting to use the\n');
fprintf('system provided hardware accelerated OpenGL library. You need to quit and restart Matlab\n');
fprintf('for these changes to take effect, otherwise visual stimulation will be broken.\n\n');
fprintf('Press any key to continue to confirm you read and understood this.\n');
pause;
fprintf('\n\n');
end
end
% Return the given answers / used config:
usedAnswers = answers;
return;
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