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/usr/lib/pkgconfig/seqan-2.pc is in libseqan2-dev 2.3.2+dfsg2-4ubuntu2.

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prefix=/usr
exec_prefix=${prefix}
includedir=${prefix}/include

Name: seqan
Description: C++ library for biological sequence analysis
URL: http://www.seqan.de
Version: 2.3.2+dfsg2-4ubuntu2
Requires: zlib
Cflags: -I${includedir} -DSEQAN_HAS_ZLIB=1 -DSEQAN_HAS_BZIP2=1
Libs: -lbz2