/usr/include/seqan/system.h is in libseqan2-dev 2.3.2+dfsg2-4ubuntu2.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 | // ==========================================================================
// SeqAn - The Library for Sequence Analysis
// ==========================================================================
// Copyright (c) 2006-2016, Knut Reinert, FU Berlin
// All rights reserved.
//
// Redistribution and use in source and binary forms, with or without
// modification, are permitted provided that the following conditions are met:
//
// * Redistributions of source code must retain the above copyright
// notice, this list of conditions and the following disclaimer.
// * Redistributions in binary form must reproduce the above copyright
// notice, this list of conditions and the following disclaimer in the
// documentation and/or other materials provided with the distribution.
// * Neither the name of Knut Reinert or the FU Berlin nor the names of
// its contributors may be used to endorse or promote products derived
// from this software without specific prior written permission.
//
// THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
// AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
// ARE DISCLAIMED. IN NO EVENT SHALL KNUT REINERT OR THE FU BERLIN BE LIABLE
// FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
// DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
// SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
// CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT
// LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY
// OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH
// DAMAGE.
//
// ==========================================================================
#ifndef SEQAN_HEADER_SYSTEM_H
#define SEQAN_HEADER_SYSTEM_H
#include <seqan/file.h>
//____________________________________________________________________________
// prerequisites
#include <cstdio>
#include <ctime>
#include <string>
#include <iostream>
#ifdef STDLIB_VS
#include <windows.h>
#else //#ifdef STDLIB_VS
#include <cstdlib>
#include <climits>
#include <errno.h>
#include <semaphore.h>
#if SEQAN_ASYNC_IO
#include <aio.h>
#endif
#include <sys/mman.h>
#ifndef O_LARGEFILE
#define O_LARGEFILE 0
#endif
#ifndef O_DIRECT
#define O_DIRECT 0
#endif
#endif //#ifdef STDLIB_VS
#include <seqan/system/system_forwards.h>
#ifndef STDLIB_VS
#include <seqan/system/file_forwards.h>
#endif // #ifndef STDLIB_VS
//____________________________________________________________________________
// multi-threading
#include <seqan/system/system_base.h>
//____________________________________________________________________________
// synchronous and asynchronous files
#include <seqan/system/file_sync.h>
#if SEQAN_ASYNC_IO
#include <seqan/system/system_event_win.h>
#include <seqan/system/file_async.h>
#endif
#include <seqan/system/file_directory.h>
#endif //#ifndef SEQAN_HEADER_...
|