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<div id="projectname">Clustal Omega
 <span id="projectnumber">1.2.4</span>
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<h3><a id="index_a"></a>- a -</h3><ul>
<li>AddSeq()
: <a class="el" href="seq_8c.html#a27f31ca0bdcd5b52610651b7e0e52cd7">seq.c</a>
, <a class="el" href="seq_8h.html#a27f31ca0bdcd5b52610651b7e0e52cd7">seq.h</a>
</li>
<li>Align()
: <a class="el" href="clustal-omega_8c.html#a4b81cbf3904e58db0cab1933a9c49de6">clustal-omega.c</a>
, <a class="el" href="clustal-omega_8h.html#a4b81cbf3904e58db0cab1933a9c49de6">clustal-omega.h</a>
</li>
<li>AlignmentOrder()
: <a class="el" href="clustal-omega_8h.html#acca45eeabddd792c304ba74817ef8640">clustal-omega.h</a>
, <a class="el" href="clustal-omega_8c.html#ae8861d040bc7774feb303b512b5c61ce">clustal-omega.c</a>
</li>
<li>AlignProfiles()
: <a class="el" href="clustal-omega_8c.html#ae6ff31cf57cecbdf048a9956d6856843">clustal-omega.c</a>
, <a class="el" href="clustal-omega_8h.html#ae6ff31cf57cecbdf048a9956d6856843">clustal-omega.h</a>
</li>
<li>AliStat()
: <a class="el" href="seq_8c.html#a7fa5b7c740c8906424057c112b192088">seq.c</a>
, <a class="el" href="seq_8h.html#a7fa5b7c740c8906424057c112b192088">seq.h</a>
</li>
<li>AlnOptsLogicCheck()
: <a class="el" href="clustal-omega_8h.html#a394a752a56ec082f179b26b51b5e5f9c">clustal-omega.h</a>
, <a class="el" href="clustal-omega_8c.html#a5d3f1735a6371e2b7cdadd5c9fd31be9">clustal-omega.c</a>
</li>
<li>AlnToHHMFile()
: <a class="el" href="clustal-omega_8c.html#afecf794470196b40101dedb0274c16e6">clustal-omega.c</a>
</li>
<li>AlnToHMM()
: <a class="el" href="clustal-omega_8c.html#a6db57e8ef883ae30b8fb26d26e4490f9">clustal-omega.c</a>
</li>
<li>AlnToHMMFile()
: <a class="el" href="clustal-omega_8c.html#a569d53b895c39664d4b8627c01579484">clustal-omega.c</a>
</li>
<li>AppendBranch()
: <a class="el" href="muscle__tree_8c.html#a805d89b00534bf6cc1ca46a7774d6b85">muscle_tree.c</a>
</li>
<li>AppendTree()
: <a class="el" href="muscle__tree_8h.html#ab36e56603758209fe3cb9d10a60c3a71">muscle_tree.h</a>
, <a class="el" href="muscle__tree_8c.html#aee042cf519dc8002cc1438feb5ba7dcd">muscle_tree.c</a>
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