This file is indexed.

/usr/share/doc/libclustalo-doc/api/html/globals_c.html is in libclustalo-doc 1.2.4-1.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
<meta http-equiv="X-UA-Compatible" content="IE=9"/>
<meta name="generator" content="Doxygen 1.8.12"/>
<meta name="viewport" content="width=device-width, initial-scale=1"/>
<title>Clustal Omega: Globals</title>
<link href="tabs.css" rel="stylesheet" type="text/css"/>
<script type="text/javascript" src="jquery.js"></script>
<script type="text/javascript" src="dynsections.js"></script>
<link href="doxygen.css" rel="stylesheet" type="text/css" />
</head>
<body>
<div id="top"><!-- do not remove this div, it is closed by doxygen! -->
<div id="titlearea">
<table cellspacing="0" cellpadding="0">
 <tbody>
 <tr style="height: 56px;">
  <td id="projectalign" style="padding-left: 0.5em;">
   <div id="projectname">Clustal Omega
   &#160;<span id="projectnumber">1.2.4</span>
   </div>
  </td>
 </tr>
 </tbody>
</table>
</div>
<!-- end header part -->
<!-- Generated by Doxygen 1.8.12 -->
<script type="text/javascript" src="menudata.js"></script>
<script type="text/javascript" src="menu.js"></script>
<script type="text/javascript">
$(function() {
  initMenu('',false,false,'search.php','Search');
});
</script>
<div id="main-nav"></div>
</div><!-- top -->
<div class="contents">
<div class="textblock">Here is a list of all functions, variables, defines, enums, and typedefs with links to the files they belong to:</div>

<h3><a id="index_c"></a>- c -</h3><ul>
<li>CalcClustalWeights()
: <a class="el" href="weights_8c.html#a58bf6d7e2b93d0cd401bf6ad355d90cb">weights.c</a>
, <a class="el" href="weights_8h.html#a58bf6d7e2b93d0cd401bf6ad355d90cb">weights.h</a>
</li>
<li>CalcDistRange()
: <a class="el" href="muscle__upgma_8c.html#af9ab8c9415df4fd62ac9b3d54b31a163">muscle_upgma.c</a>
</li>
<li>CheckIfFileExists()
: <a class="el" href="util_8c.html#a7d77d1304042872b6e8b9f599c26c49a">util.c</a>
</li>
<li>CKCALLOC
: <a class="el" href="util_8h.html#a368b61529c2c0bee75519b56256be5e7">util.h</a>
</li>
<li>CkCalloc()
: <a class="el" href="util_8c.html#a4a66f56360f9c91a4845bdf9c192e08a">util.c</a>
, <a class="el" href="util_8h.html#a4a66f56360f9c91a4845bdf9c192e08a">util.h</a>
</li>
<li>CKFREE
: <a class="el" href="util_8h.html#a911d2d6bfb17f86eda7d4af941f58051">util.h</a>
</li>
<li>CkFree()
: <a class="el" href="util_8c.html#abcad90d2861523f68945f04b7bf81752">util.c</a>
, <a class="el" href="util_8h.html#abcad90d2861523f68945f04b7bf81752">util.h</a>
</li>
<li>CKMALLOC
: <a class="el" href="util_8h.html#a6d14a9e26af7aad1cb9a4006155be401">util.h</a>
</li>
<li>CkMalloc()
: <a class="el" href="util_8c.html#a5eef28a6c3e6ad1ef32499cd90d922d1">util.c</a>
, <a class="el" href="util_8h.html#a5fc3d869ab98caf740b58539efef01bb">util.h</a>
</li>
<li>CkRealloc()
: <a class="el" href="util_8h.html#a14acb2efac545e46035708957463d9e2">util.h</a>
, <a class="el" href="util_8c.html#a14acb2efac545e46035708957463d9e2">util.c</a>
</li>
<li>CKREALLOC
: <a class="el" href="util_8h.html#a85df19c6ad8d9c4938f58863f9917d4a">util.h</a>
</li>
<li>CkStrdup()
: <a class="el" href="util_8c.html#a57c4534ecabab8d8c12dd52cdbb01a53">util.c</a>
, <a class="el" href="util_8h.html#a4d6fde7b9604e0301c18f68b252db010">util.h</a>
</li>
<li>CLUSTALO_LIST_HEAD
: <a class="el" href="list_8h.html#a97c1a3c852fd108681a50dd878b549a2">list.h</a>
</li>
<li>CLUSTERING_UNKNOWN
: <a class="el" href="clustal-omega_8h.html#a5398df952e5d5f2e57546786d7dc7052">clustal-omega.h</a>
</li>
<li>CLUSTERING_UPGMA
: <a class="el" href="clustal-omega_8h.html#a5c953a191fc1501921b3db847abc6986">clustal-omega.h</a>
</li>
<li>COMPUTE_WITHIN_SUBCLUSTER_AVERAGE
: <a class="el" href="mbed_8c.html#aa5c0037bc09cddf91dff29e4ac007835">mbed.c</a>
</li>
<li>CopyMSeq()
: <a class="el" href="seq_8c.html#a6b124a1118f2276d2a2978227efd0ab4">seq.c</a>
, <a class="el" href="seq_8h.html#a6b124a1118f2276d2a2978227efd0ab4">seq.h</a>
</li>
<li>CosDist()
: <a class="el" href="mbed_8c.html#abc721f0bc4c65e7a3c3d3bdda291f1c9">mbed.c</a>
</li>
<li>CountLeaves()
: <a class="el" href="weights_8c.html#a426bca6e742eb12e81f9d09ed90fe042">weights.c</a>
</li>
</ul>
</div><!-- contents -->
<!-- start footer part -->
<hr class="footer"/><address class="footer"><small>
Generated by &#160;<a href="http://www.doxygen.org/index.html">
<img class="footer" src="doxygen.png" alt="doxygen"/>
</a> 1.8.12
</small></address>
</body>
</html>