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  <td id="projectalign" style="padding-left: 0.5em;">
   <div id="projectname">Cassiopee
   &#160;<span id="projectnumber">1.0</span>
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   <div id="projectbrief">Suffix indexer and search tool</div>
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<div class="title">CassieIndexer Member List</div>  </div>
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<p>This is the complete list of members for <a class="el" href="classCassieIndexer.html">CassieIndexer</a>, including all inherited members.</p>
<table class="directory">
  <tr class="even"><td class="entry"><a class="el" href="classCassieIndexer.html#a2c259abfde72f1dfd2cf3b35dc354268">CassieIndexer</a>(const char *path)</td><td class="entry"><a class="el" href="classCassieIndexer.html">CassieIndexer</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classCassieIndexer.html#a09cce9f97298b7f1f2ccb15435e0719a">do_reduction</a></td><td class="entry"><a class="el" href="classCassieIndexer.html">CassieIndexer</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classCassieIndexer.html#a2839d16de46c5f0b1843f236214b2833">filltree</a>(long pos)</td><td class="entry"><a class="el" href="classCassieIndexer.html">CassieIndexer</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classCassieIndexer.html#a47a624ee9b7c108d965af6f3e10d8c59">getCharAtSuffix</a>(long pos)</td><td class="entry"><a class="el" href="classCassieIndexer.html">CassieIndexer</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classCassieIndexer.html#adbfbc9c4c3b73d7e3300347faa40bfb1">getSuffix</a>(long pos)</td><td class="entry"><a class="el" href="classCassieIndexer.html">CassieIndexer</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classCassieIndexer.html#a149883d1037f6a7246e47536717ec98a">getTree</a>()</td><td class="entry"><a class="el" href="classCassieIndexer.html">CassieIndexer</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classCassieIndexer.html#a03a3bf5690b95a241ac270a74895ab6d">graph</a>()</td><td class="entry"><a class="el" href="classCassieIndexer.html">CassieIndexer</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classCassieIndexer.html#a66b34970351f8666b59b95e49bed23ca">graph</a>(int depth)</td><td class="entry"><a class="el" href="classCassieIndexer.html">CassieIndexer</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classCassieIndexer.html#a421f7d6a4a1056529bbf50667afdeba3">index</a>()</td><td class="entry"><a class="el" href="classCassieIndexer.html">CassieIndexer</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classCassieIndexer.html#a8efad6379cef074e8922698e4c7840b1">index_loaded_from_file</a>()</td><td class="entry"><a class="el" href="classCassieIndexer.html">CassieIndexer</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classCassieIndexer.html#aa7c7d09f58a6fb3bafe015656b0d6911">load</a>()</td><td class="entry"><a class="el" href="classCassieIndexer.html">CassieIndexer</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classCassieIndexer.html#a9bcb8811e2179ec6a22e69497f6158c5">matches</a></td><td class="entry"><a class="el" href="classCassieIndexer.html">CassieIndexer</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classCassieIndexer.html#a3826371cabc94c7165b042661601642f">max_depth</a></td><td class="entry"><a class="el" href="classCassieIndexer.html">CassieIndexer</a></td><td class="entry"></td></tr>
  <tr><td class="entry"><a class="el" href="classCassieIndexer.html#a21c8aab233976b1ea2cface6fae59119">max_index_depth</a></td><td class="entry"><a class="el" href="classCassieIndexer.html">CassieIndexer</a></td><td class="entry"></td></tr>
  <tr class="even"><td class="entry"><a class="el" href="classCassieIndexer.html#a481f1dd85b429fbf6dc069f28acd2d83">save</a>()</td><td class="entry"><a class="el" href="classCassieIndexer.html">CassieIndexer</a></td><td class="entry"></td></tr>
  <tr bgcolor="#f0f0f0"><td class="entry"><b>seq_length</b> (defined in <a class="el" href="classCassieIndexer.html">CassieIndexer</a>)</td><td class="entry"><a class="el" href="classCassieIndexer.html">CassieIndexer</a></td><td class="entry"></td></tr>
  <tr bgcolor="#f0f0f0" class="even"><td class="entry"><b>~CassieIndexer</b>() (defined in <a class="el" href="classCassieIndexer.html">CassieIndexer</a>)</td><td class="entry"><a class="el" href="classCassieIndexer.html">CassieIndexer</a></td><td class="entry"></td></tr>
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