/usr/share/avogadro/fragments/alkanes/hexadecane.cml is in avogadro-data 1.2.0-3.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 | <?xml version="1.0" encoding="UTF-8"?>
<molecule xmlns="http://www.xml-cml.org/schema"
xmlns:cml="http://www.xml-cml.org/dict/cml"
xmlns:units="http://www.xml-cml.org/units/units"
xmlns:xsd="http://www.w3c.org/2001/XMLSchema"
xmlns:iupac="http://www.iupac.org"
id="CS_hexadecane">
<formula concise=" C 16 H 34 "/>
<identifier convention="iupac:inchi" value="1/C16H34/c1-3-5-7-9-11-13-15-16-14-12-10-8-6-4-2/h3-16H2,1-2H3"/>
<name convention="IUPAC">Hexadecane</name>
<atomArray>
<atom id="a1" elementType="H" x3="9.179502" y3="-0.607697" z3="4.668916"/>
<atom id="a2" elementType="C" x3="8.638328" y3="-0.538102" z3="3.716803"/>
<atom id="a3" elementType="H" x3="8.999597" y3="0.360326" z3="3.198780"/>
<atom id="a4" elementType="H" x3="8.931458" y3="-1.404189" z3="3.108563"/>
<atom id="a5" elementType="C" x3="7.143180" y3="-0.491785" z3="3.936912"/>
<atom id="a6" elementType="H" x3="6.814294" y3="-1.392918" z3="4.491943"/>
<atom id="a7" elementType="H" x3="6.882511" y3="0.367792" z3="4.586122"/>
<atom id="a8" elementType="C" x3="6.389369" y3="-0.392257" z3="2.620396"/>
<atom id="a9" elementType="H" x3="6.718344" y3="0.508806" z3="2.064393"/>
<atom id="a10" elementType="H" x3="6.649433" y3="-1.252356" z3="1.970913"/>
<atom id="a11" elementType="C" x3="4.886622" y3="-0.345384" z3="2.843788"/>
<atom id="a12" elementType="H" x3="4.558301" y3="-1.247104" z3="3.399197"/>
<atom id="a13" elementType="H" x3="4.627194" y3="0.514319" z3="3.494182"/>
<atom id="a14" elementType="C" x3="4.134618" y3="-0.245047" z3="1.526567"/>
<atom id="a15" elementType="H" x3="4.463430" y3="0.656087" z3="0.970486"/>
<atom id="a16" elementType="H" x3="4.393347" y3="-1.105222" z3="0.876565"/>
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<atom id="a18" elementType="H" x3="2.303249" y3="-1.098657" z3="2.306333"/>
<atom id="a19" elementType="H" x3="2.373003" y3="0.662816" z3="2.400518"/>
<atom id="a20" elementType="C" x3="1.879386" y3="-0.097267" z3="0.433449"/>
<atom id="a21" elementType="H" x3="2.208132" y3="0.803641" z3="-0.123049"/>
<atom id="a22" elementType="H" x3="2.137690" y3="-0.957712" z3="-0.216387"/>
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<atom id="a24" elementType="H" x3="0.048163" y3="-0.950213" z3="1.214342"/>
<atom id="a25" elementType="H" x3="0.118272" y3="0.811273" z3="1.307701"/>
<atom id="a26" elementType="C" x3="-0.376104" y3="0.050424" z3="-0.658912"/>
<atom id="a27" elementType="H" x3="-0.047513" y3="0.951146" z3="-1.215779"/>
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<atom id="a30" elementType="H" x3="-2.207273" y3="-0.802256" z3="0.122519"/>
<atom id="a31" elementType="H" x3="-2.137227" y3="0.959241" z3="0.215196"/>
<atom id="a32" elementType="C" x3="-2.631512" y3="0.197571" z3="-1.751176"/>
<atom id="a33" elementType="H" x3="-2.302989" y3="1.098182" z3="-2.308275"/>
<atom id="a34" elementType="H" x3="-2.373129" y3="-0.663288" z3="-2.400422"/>
<atom id="a35" elementType="C" x3="-4.134251" y3="0.245506" z3="-1.526849"/>
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<atom id="a38" elementType="C" x3="-4.886799" y3="0.344420" z3="-2.843869"/>
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<atom id="a41" elementType="C" x3="-6.389440" y3="0.391737" z3="-2.619852"/>
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<atom id="a44" elementType="C" x3="-7.143757" y3="0.491538" z3="-3.936048"/>
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<atom id="a46" elementType="H" x3="-6.883562" y3="-0.368050" z3="-4.585391"/>
<atom id="a47" elementType="C" x3="-8.638828" y3="0.537808" z3="-3.715383"/>
<atom id="a48" elementType="H" x3="-9.000381" y3="-0.362643" z3="-3.201096"/>
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<atom id="a50" elementType="H" x3="-9.180161" y3="0.611484" z3="-4.667116"/>
</atomArray>
<bondArray>
<bond atomRefs2="a1 a2" order="1"/>
<bond atomRefs2="a2 a3" order="1"/>
<bond atomRefs2="a2 a4" order="1"/>
<bond atomRefs2="a2 a5" order="1"/>
<bond atomRefs2="a5 a6" order="1"/>
<bond atomRefs2="a5 a7" order="1"/>
<bond atomRefs2="a5 a8" order="1"/>
<bond atomRefs2="a8 a9" order="1"/>
<bond atomRefs2="a8 a10" order="1"/>
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<bond atomRefs2="a11 a13" order="1"/>
<bond atomRefs2="a11 a14" order="1"/>
<bond atomRefs2="a14 a15" order="1"/>
<bond atomRefs2="a14 a16" order="1"/>
<bond atomRefs2="a14 a17" order="1"/>
<bond atomRefs2="a17 a18" order="1"/>
<bond atomRefs2="a17 a19" order="1"/>
<bond atomRefs2="a17 a20" order="1"/>
<bond atomRefs2="a20 a21" order="1"/>
<bond atomRefs2="a20 a22" order="1"/>
<bond atomRefs2="a20 a23" order="1"/>
<bond atomRefs2="a23 a24" order="1"/>
<bond atomRefs2="a23 a25" order="1"/>
<bond atomRefs2="a23 a26" order="1"/>
<bond atomRefs2="a26 a27" order="1"/>
<bond atomRefs2="a26 a28" order="1"/>
<bond atomRefs2="a26 a29" order="1"/>
<bond atomRefs2="a29 a30" order="1"/>
<bond atomRefs2="a29 a31" order="1"/>
<bond atomRefs2="a29 a32" order="1"/>
<bond atomRefs2="a32 a33" order="1"/>
<bond atomRefs2="a32 a34" order="1"/>
<bond atomRefs2="a32 a35" order="1"/>
<bond atomRefs2="a35 a36" order="1"/>
<bond atomRefs2="a35 a37" order="1"/>
<bond atomRefs2="a35 a38" order="1"/>
<bond atomRefs2="a38 a39" order="1"/>
<bond atomRefs2="a38 a40" order="1"/>
<bond atomRefs2="a38 a41" order="1"/>
<bond atomRefs2="a41 a42" order="1"/>
<bond atomRefs2="a41 a43" order="1"/>
<bond atomRefs2="a41 a44" order="1"/>
<bond atomRefs2="a44 a45" order="1"/>
<bond atomRefs2="a44 a46" order="1"/>
<bond atomRefs2="a44 a47" order="1"/>
<bond atomRefs2="a47 a48" order="1"/>
<bond atomRefs2="a47 a49" order="1"/>
<bond atomRefs2="a47 a50" order="1"/>
</bondArray>
<propertyList>
<property dictRef="cml:molwt" title="Molecular weight">
<scalar dataType="xsd:double" dictRef="cml:molwt" units="units:g">226.4412</scalar>
</property>
<property dictRef="cml:monoisotopicwt" title="Monoisotopic weight">
<scalar dataType="xsd:double" dictRef="cml:monoisotopicwt" units="units:g">226.2660511</scalar>
</property>
<property dictRef="cml:mp" title="Melting point">
<scalar dataType="xsd:double" errorValue="1.0" dictRef="cml:mp" units="units:celsius">18</scalar>
</property>
<property dictRef="cml:bp" title="Boiling point">
<scalar dataType="xsd:double" errorValue="1.0" dictRef="cml:bp" units="units:celsius">287</scalar>
</property>
</propertyList>
</molecule>
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