/usr/share/avogadro/builder/amino/l-arg.zmat is in avogadro-data 1.2.0-3.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 | N 0.000000 0.000000 0.000000 0 0 0 -0.245287 N
C 1.460033 0.000000 0.000000 1 0 0 0.087598 CA
C 1.539554 106.312610 0.000000 2 1 0 0.217712 C
O 1.230154 122.878841 338.203794 3 2 1 -0.287208 O
C 1.535936 110.553877 238.223887 2 1 3 -0.030554 CB
H 1.097867 110.007613 72.158757 5 2 1 0.028431 1HB
H 1.097312 109.398137 315.825045 5 2 1 0.028431 2HB
C 1.528672 113.258329 194.910836 5 2 1 -0.063684 CG
H 1.096999 110.097377 50.045580 8 5 2 0.024875 1HG
H 1.095110 110.235680 292.387836 8 5 2 0.024875 2HG
C 1.525231 111.480325 171.320725 8 5 2 -0.067992 CD
H 1.094751 111.003662 59.552416 11 8 5 0.008551 1HD
H 1.093892 110.417900 298.964474 11 8 5 0.008551 2HD
N 1.462863 108.210798 178.109030 11 8 5 0.408051 NE
H 1.016892 117.401948 315.255651 14 11 8 -0.051997 HE
C 1.356669 125.348935 136.455894 14 11 8 0.055476 CZ
N 1.305481 129.699692 179.371234 16 14 11 -0.355338 NH1
H 1.028814 157.338515 178.875795 17 15 14 0.102032 HH1
H 1.028814 120.050000 0.500000 17 16 14 0.102032 1HH1
N 1.268681 129.658960 0.439459 16 14 11 -0.325793 NH2
H 1.003605 121.825737 0.411366 20 16 14 0.118110 1HH2
H 1.008513 117.473869 180.154058 20 16 14 0.118110 2HH2
H 1.017157 117.178252 17.311168 1 2 3 0.141360 H
H 1.096476 107.659390 116.924543 2 1 3 0.055689 HA
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