This file is indexed.

/usr/share/autodock/Tests/1pgp_ligNOH.pdbqt is in autodock-test 4.2.6-5.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

 1
 2
 3
 4
 5
 6
 7
 8
 9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
REMARK  11 active torsions:
REMARK  status: ('A' for Active; 'I' for Inactive)
REMARK    1  A    between atoms: C1_7317  and  C2_7318 
REMARK    2  A    between atoms: C4_7322  and  O5_7335 
REMARK    3  A    between atoms: O7_7339  and  P1_7340 
REMARK    4  A    between atoms: C4_7322  and  C5_7324 
REMARK    5  A    between atoms: C3_7320  and  C4_7322 
REMARK    6  A    between atoms: C2_7318  and  C3_7320 
REMARK    7  A    between atoms: C5_7324  and  C6_7326 
REMARK    8  A    between atoms: C2_7318  and  O3_7331 
REMARK    9  A    between atoms: C3_7320  and  O4_7333 
REMARK   10  A    between atoms: C5_7324  and  O6_7337 
REMARK   11  A    between atoms: C6_7326  and  O7_7339 
REMARK RMS_REF  0.6600
ROOT
ATOM      1  C4  PGP     1      22.894  28.598  40.259  1.00 30.80     0.180 C 
ENDROOT
BRANCH   1   2
ATOM      2  C3  PGP     1      21.922  27.809  39.260  1.00 30.93     0.188 C 
BRANCH   2   3
ATOM      3  C2  PGP     1      20.328  27.813  39.443  1.00 35.22     0.250 C 
BRANCH   3   4
ATOM      4  O3  PGP     1      19.999  27.345  40.750  1.00 40.31    -0.382 OA
ENDBRANCH   3   4
BRANCH   3   5
ATOM      5  C1  PGP     1      19.701  29.203  39.198  1.00 35.87     0.205 C 
ATOM      6  O2  PGP     1      18.498  29.386  39.417  1.00 37.45    -0.646 OA
ATOM      7  O1  PGP     1      20.399  30.200  38.707  1.00 36.75    -0.646 OA
ENDBRANCH   3   5
ENDBRANCH   2   3
BRANCH   2   8
ATOM      8  O4  PGP     1      22.087  28.265  37.936  1.00 33.78    -0.390 OA
ENDBRANCH   2   8
ENDBRANCH   1   2
BRANCH   1   9
ATOM      9  O5  PGP     1      22.804  30.023  40.224  1.00 30.90    -0.390 OA
ENDBRANCH   1   9
BRANCH   1  10
ATOM     10  C5  PGP     1      24.464  28.252  40.029  1.00 29.83     0.173 C 
BRANCH  10  11
ATOM     11  O6  PGP     1      25.163  28.259  41.267  1.00 26.30    -0.391 OA
ENDBRANCH  10  11
BRANCH  10  12
ATOM     12  C6  PGP     1      25.350  29.132  39.061  1.00 33.11     0.217 C 
BRANCH  12  13
ATOM     13  O7  PGP     1      25.797  30.509  39.509  1.00 32.60    -0.405 OA
BRANCH  13  14
ATOM     14  P1  PGP     1      27.362  30.851  39.818  1.00 28.88     0.422 P 
ATOM     15  O8  PGP     1      27.636  30.201  41.167  1.00 30.33    -0.742 OA
ATOM     16  O9  PGP     1      27.639  32.300  40.093  1.00 26.26    -0.742 OA
ATOM     17  O10 PGP     1      28.360  30.259  38.733  1.00 30.04    -0.742 OA
ENDBRANCH  13  14
ENDBRANCH  12  13
ENDBRANCH  10  12
ENDBRANCH   1  10
TORSDOF 7