/usr/share/doc/garlic/examples/bonds.script is in garlic 1.6-1.1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 | # Show all drawing styles used to draw bonds. Atoms are hidden!
# This script will work if you use default .garlicrc script.
# This script requires garlic version 1.2!
# Bond style 1:
load trp.pdb
pos -15 -5 -50
ato 0
bon 1
tag "1"
# Now inform user that refreshing is off:
title 1 50 50 "Please be patient ..."
# Switch refreshing off:
refresh off
# Bond style 2:
load trp.pdb
pos -5 -5 -50
ato 0
bon 2
tag "2"
# Bond style 3:
load trp.pdb
pos 5 -5 -50
ato 0
bon 3
tag "3"
# Bond style 4:
load trp.pdb
pos 15 -5 -50
ato 0
bon 4
tag "4"
# Bond style 5:
load trp.pdb
pos -15 5 -50
ato 0
bon 5
tag "5"
# Bond style nice:
load trp.pdb
pos -5 5 -50
ato co2
bon nice
tag "nic (nice)"
# Bond style sticks:
load trp.pdb
pos 5 5 -50
ato ba2
bon sticks
tag "sti (sticks)"
# Hide the title:
title 1 off
# Switch refreshing on:
refresh
|