/var/lib/gnumed/server/bootstrap/bootstrap-latest.sh is in gnumed-server 16.17-1.
This file is owned by root:root, with mode 0o755.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 | #!/bin/bash
# - should be run as root
# - command line options:
# - "quiet"
VERSIONS_TO_DROP="2 3 4 5 6 7 8 9 10 11 12 13 14"
PREV_VER="15"
VER="16"
QUIET="$1"
if test ! -n "${GM_LOG_BASE}" ; then
GM_LOG_BASE="."
fi ;
# if you need to adjust the port you want to use to
# connect to PostgreSQL you can use the environment
# variable below (this may be necessary if your PostgreSQL
# server is running on a port different from the default 5432)
#export GM_DB_PORT="5433"
# tell libpq-based tools about the non-default port, if any
if test -n "${GM_DB_PORT}" ; then
PORT_DEF="-p ${GM_DB_PORT}"
export PGPORT="${GM_DB_PORT}"
else
PORT_DEF=""
fi ;
function echo_msg () {
if test "$QUIET" == "quiet"; then
return
fi ;
echo $1 ;
}
echo_msg "==========================================================="
echo_msg "Bootstrapping latest GNUmed database."
echo_msg ""
echo_msg "This will set up a GNUmed database of version v${VER}"
echo_msg "with the name \"gnumed_v${VER}\"."
# better safe than sorry
ALL_PREV_VERS="${VERSIONS_TO_DROP} ${PREV_VER} ${VER}"
for DB_VER in ${ALL_PREV_VERS} ; do
VER_EXISTS=`su -c "psql -l ${PORT_DEF}" -l postgres | grep gnumed_v${DB_VER}`
if test "${VER_EXISTS}" != "" ; then
echo ""
echo "------------------------------------------------"
echo "The database \"gnumed_v${DB_VER}\" already exists."
echo "Note that during bootstrapping this"
echo "database will be OVERWRITTEN !"
echo ""
echo "Do you really intend to bootstrap or did you"
echo "rather want to *upgrade* from v${PREV_VER} to v${VER} ?"
echo ""
echo "(For upgrading you should run the"
echo " upgrade script instead.)"
echo ""
echo "Continue bootstrapping (deletes databases) ? "
echo ""
read -e -p "[yes / NO]: "
if test "${REPLY}" != "yes" ; then
echo "Bootstrapping aborted by user."
exit 1
fi
fi
done
LOG="${GM_LOG_BASE}/bootstrap-latest.log"
CONF="bootstrap-latest.conf"
./bootstrap_gm_db_system.py --log-file=${LOG} --conf-file=${CONF} --${QUIET}
if test "$?" != "0" ; then
echo "Bootstrapping \"gnumed_v${VER}\" did not finish successfully. Aborting."
exit 1
fi
for DB_VER in ${VERSIONS_TO_DROP} ; do
echo_msg "Dropping obsoleted staging database gnumed_v${DB_VER} ..."
echo_msg " (you may need to provide the password for ${USER})"
su -c "dropdb ${PORT_DEF} gnumed_v${DB_VER}" -l postgres
done
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