emboss-test 6.4.0-2 / usr / share / EMBOSS / test / swnew / trembl.dat

ID   O42495_TAKRU            Unreviewed;       433 AA.
AC   O42495;
DT   01-JAN-1998, integrated into UniProtKB/TrEMBL.
DT   01-OCT-2002, sequence version 2.
DT   15-JUN-2010, entry version 52.
DE   SubName: Full=SkmBOP;
GN   Name=skmBOP;
OS   Takifugu rubripes (Japanese pufferfish) (Fugu rubripes).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Euteleostei; Neoteleostei;
OC   Acanthomorpha; Acanthopterygii; Percomorpha; Tetraodontiformes;
OC   Tetradontoidea; Tetraodontidae; Takifugu.
OX   NCBI_TaxID=31033;
RN   [1]
RP   NUCLEOTIDE SEQUENCE.
RX   MEDLINE=98024154; PubMed=9356472; DOI=10.1073/pnas.94.23.12462;
RA   Venkatesh B., Si-Hoe S.L., Murphy D., Brenner S.;
RT   "Transgenic rats reveal functional conservation of regulatory controls
RT   between the Fugu isotocin and rat oxytocin genes.";
RL   Proc. Natl. Acad. Sci. U.S.A. 94:12462-12466(1997).
RN   [2]
RP   NUCLEOTIDE SEQUENCE.
RX   MEDLINE=22220114; PubMed=12234665; DOI=10.1016/S0378-1119(02)00793-X;
RA   Gilligan P., Brenner S., Venkatesh B.;
RT   "Fugu and human sequence comparison identifies novel human genes and
RT   conserved non-coding sequences.";
RL   Gene 294:35-44(2002).
CC   -!- SIMILARITY: Contains 1 SET domain.
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DR   EMBL; U90880; AAC60295.2; -; Genomic_DNA.
DR   SMR; O42495; 6-225.
DR   Ensembl; ENSTRUT00000039921; ENSTRUP00000039780; ENSTRUG00000015565; Takifugu rubripes.
DR   eggNOG; fiNOG11467; -.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   InterPro; IPR001214; SET_dom.
DR   InterPro; IPR002893; Znf_MYND.
DR   Pfam; PF00856; SET; 1.
DR   Pfam; PF01753; zf-MYND; 1.
DR   SMART; SM00317; SET; 1.
DR   PROSITE; PS50280; SET; 1.
DR   PROSITE; PS01360; ZF_MYND_1; 1.
DR   PROSITE; PS50865; ZF_MYND_2; 1.
PE   4: Predicted;
KW   Metal-binding.
SQ   SEQUENCE   433 AA;  49500 MW;  7CA7DE79E73EEE26 CRC64;
     MENVAIFDSP GKGRGLKTTK EFWAGDVIFS EPSLAAVVFD SLAERICHSC FRRQEKLQKC
     SQCKFAHYCD RTCQRAGWAE HKQECGAIKA YGKAPNENIR VVSHMQLITV EELEDHVADM
     QEDEIKELKV DIHNFLDYWP RNSKQHTIDD ISHIFGVINC NGFTVSDQRG LQAVGVGLFP
     NLCMVNHNCW PNCTVILNHG KIELRSLGKI AEGEELTVAY VDFLNLSEER RRLLKTQYFF
     DCQCDYCKNG TKDDLKLAGR EVDGVKVVKI CRDVIDRTEP VLADNHIYLL RMWSTLSEVQ
     AYLQYFNDAA EKLYHPNNAA LGMAAMRAGV NHWQAGLIEV GHGMVCKAYA ILLRFCHHIW
     CKTRKCLMSS VVVIVSAFTG DADQTEMELR MFKQNEYVYH SMRDAALQNK PITMLHEPKG
     VEEGIKNLFH RRK
//
ID   Q1KKT3_TAKRU            Unreviewed;       412 AA.
AC   Q1KKT3;
DT   30-MAY-2006, integrated into UniProtKB/TrEMBL.
DT   30-MAY-2006, sequence version 1.
DT   18-MAY-2010, entry version 26.
DE   SubName: Full=Even-skipped homeobox 2;
GN   Name=Evx2;
OS   Takifugu rubripes (Japanese pufferfish) (Fugu rubripes).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Euteleostei; Neoteleostei;
OC   Acanthomorpha; Acanthopterygii; Percomorpha; Tetraodontiformes;
OC   Tetradontoidea; Tetraodontidae; Takifugu.
OX   NCBI_TaxID=31033;
RN   [1]
RP   NUCLEOTIDE SEQUENCE.
RX   PubMed=16636282; DOI=10.1073/pnas.0601492103;
RA   Lee A.P., Koh E.G.L., Tay A., Brenner S., Venkatesh B.;
RT   "Highly conserved syntenic blocks at the vertebrate Hox loci and
RT   conserved regulatory elements within and outside Hox gene clusters.";
RL   Proc. Natl. Acad. Sci. U.S.A. 103:6994-6999(2006).
CC   -!- SUBCELLULAR LOCATION: Nucleus (By similarity).
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DR   EMBL; DQ481668; ABF22461.1; -; Genomic_DNA.
DR   SMR; Q1KKT3; 165-221.
DR   Ensembl; ENSTRUT00000045103; ENSTRUP00000044951; ENSTRUG00000017536; Takifugu rubripes.
DR   eggNOG; fiNOG11494; -.
DR   PhylomeDB; Q1KKT3; -.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0003700; F:transcription factor activity; IEA:InterPro.
DR   GO; GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
DR   InterPro; IPR001356; Homeobox.
DR   InterPro; IPR017970; Homeobox_CS.
DR   InterPro; IPR020479; Homeobox_region.
DR   InterPro; IPR009057; Homeodomain-like.
DR   InterPro; IPR012287; Homeodomain-rel.
DR   Gene3D; G3DSA:1.10.10.60; Homeodomain-rel; 1.
DR   Pfam; PF00046; Homeobox; 1.
DR   PRINTS; PR00024; HOMEOBOX.
DR   SMART; SM00389; HOX; 1.
DR   SUPFAM; SSF46689; Homeodomain_like; 1.
DR   PROSITE; PS00027; HOMEOBOX_1; 1.
DR   PROSITE; PS50071; HOMEOBOX_2; 1.
PE   3: Inferred from homology;
KW   DNA-binding; Homeobox; Nucleus.
SQ   SEQUENCE   412 AA;  44015 MW;  7E7FEA72B2BC421E CRC64;
     MMERIRKEMI LMERGLHSPV AGKRLTDAPG NSVLEALENS QHSGRLSPRI TSASLHGNLG
     DIPSKGKFEI DSLFGTHHSS DNASSVDINS SENRKKMSIY SEVSPDSDIN SDVEVGCPAH
     RSPSQHKENN KGFSDSNNGS SSSNSGANIN GNSSAGSNNS DQVRRYRTAF TREQIARLEK
     EFYRENYVSR PRRCELAAAL NLPETTIKVW FQNRRMKDKR QRLAMSWPHP ADPSFYTYMM
     THAAATGSLP YPFHSHMPLH YYPHVGVTAA AAAAAATGAA SSPFATSIRP LDTFRALSHP
     YSRPELLCSF RHPGLYQSTA GLNSSAAASA AAAAAAAAAA VSAPSASGPC SCLSCHSSQA
     ASALGSRSAG ADFTCTASGQ RSESGFLPYS AAVLSKTSVP SPDPREETSL TR
//
ID   Q1KL02_TAKRU            Unreviewed;       676 AA.
AC   Q1KL02;
DT   30-MAY-2006, integrated into UniProtKB/TrEMBL.
DT   30-MAY-2006, sequence version 1.
DT   15-JUN-2010, entry version 31.
DE   SubName: Full=Chimerin 2;
GN   Name=Chn2;
OS   Takifugu rubripes (Japanese pufferfish) (Fugu rubripes).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Euteleostei; Neoteleostei;
OC   Acanthomorpha; Acanthopterygii; Percomorpha; Tetraodontiformes;
OC   Tetradontoidea; Tetraodontidae; Takifugu.
OX   NCBI_TaxID=31033;
RN   [1]
RP   NUCLEOTIDE SEQUENCE.
RX   PubMed=16636282; DOI=10.1073/pnas.0601492103;
RA   Lee A.P., Koh E.G.L., Tay A., Brenner S., Venkatesh B.;
RT   "Highly conserved syntenic blocks at the vertebrate Hox loci and
RT   conserved regulatory elements within and outside Hox gene clusters.";
RL   Proc. Natl. Acad. Sci. U.S.A. 103:6994-6999(2006).
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DR   EMBL; DQ481664; ABF22392.1; -; Genomic_DNA.
DR   SMR; Q1KL02; 3-115, 419-676.
DR   Ensembl; ENSTRUT00000039907; ENSTRUP00000039766; ENSTRUG00000015557; Takifugu rubripes.
DR   eggNOG; fiNOG10110; -.
DR   InParanoid; Q1KL02; -.
DR   GO; GO:0005622; C:intracellular; IEA:InterPro.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0005515; F:protein binding; IEA:InterPro.
DR   GO; GO:0007165; P:signal transduction; IEA:InterPro.
DR   InterPro; IPR020454; DAG/PE_bd.
DR   InterPro; IPR002219; Prot_Kinase_C-like_PE/DAG_bd.
DR   InterPro; IPR008936; Rho_GTPase_activation_prot.
DR   InterPro; IPR000198; RhoGAP.
DR   InterPro; IPR000980; SH2.
DR   Gene3D; G3DSA:1.10.555.10; RhoGAP; 1.
DR   Gene3D; G3DSA:3.30.505.10; SH2; 1.
DR   Pfam; PF00130; C1_1; 1.
DR   Pfam; PF00620; RhoGAP; 1.
DR   Pfam; PF00017; SH2; 1.
DR   PRINTS; PR00008; DAGPEDOMAIN.
DR   SMART; SM00109; C1; 1.
DR   SMART; SM00324; RhoGAP; 1.
DR   SMART; SM00252; SH2; 1.
DR   SUPFAM; SSF48350; Rho_GAP; 1.
DR   PROSITE; PS50238; RHOGAP; 1.
DR   PROSITE; PS50001; SH2; 1.
DR   PROSITE; PS00479; ZF_DAG_PE_1; 1.
DR   PROSITE; PS50081; ZF_DAG_PE_2; 1.
PE   4: Predicted;
KW   Metal-binding; Zinc.
SQ   SEQUENCE   676 AA;  77365 MW;  417B610C5ACC1B97 CRC64;
     MLFQKLFHGR ISREYADELL ATAEGAYLIR ESQRQPGSHT LALRFGHQTL NYRLFYDGKH
     FVGEKRFESV HDLVTDALIT LYIETKAAEY IAKMTTNPIY EHLGYTSLLK DKTVHRLNRG
     RTEPRRVTFQ RDERVSLLVI EAVEPSVRGC FVESVCRSVL LSYRVSPHCA VWSVSSRPTE
     SHLPSHKRAQ PLVLPPQQPH QAEISIYKSS LPRLSPQTTH VCIFSRNVSH NGKYLHLPCH
     SGKRQDFPDG REKPLLRGLA VVFYFASKRP ALSFYLGFAV ALKVFSFLLR HCDTLSSLIH
     FAPESDLVRV LQLLPRWAVL SPLCNFPQRR WSVCGNPTGP LWRLKKTEEV WEAELITHKA
     RRHERKRQEL LALALGVKLG SKGTILWKPI KLLASCPQIA SPLVRRTVLK DAPEKQCSYE
     KMHNFKVHTF RGPHWCEYCA NFMWGLIAQG VRCSDCGLNV HKQCSKLVPS DCQPDLRRIK
     KVFSCDLTTL VKAHNSTRPM VVDMCIQEIE LRGMKSEGLY RVSGFSEHIE DVRLAFDRDG
     DKADISASAY ADINIIAGAL KLYLRDLPIP VITFELYSKF IQAARIPNAD TRLEAIHDSL
     LQLPPAHYET LRYLMAHLKR VTLFEKYNLM NAENLGIVFG PTLMQPPEMN ALTTLNDMRL
     QKLVVQLMIE HEDVLF
//
ID   Q2HPN2_TAKRU            Unreviewed;       317 AA.
AC   Q2HPN2;
DT   21-MAR-2006, integrated into UniProtKB/TrEMBL.
DT   21-MAR-2006, sequence version 1.
DT   02-MAR-2010, entry version 19.
DE   SubName: Full=Beta1,4-galactosyltransferase 7;
DE            EC=2.4.1.133;
GN   Name=b4Gal-T7;
OS   Takifugu rubripes (Japanese pufferfish) (Fugu rubripes).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Euteleostei; Neoteleostei;
OC   Acanthomorpha; Acanthopterygii; Percomorpha; Tetraodontiformes;
OC   Tetradontoidea; Tetraodontidae; Takifugu.
OX   NCBI_TaxID=31033;
RN   [1]
RP   NUCLEOTIDE SEQUENCE.
RA   Ouzzine M., Bui C., Fournel-Gigleux S., Mollicone R., Oriol R.;
RT   "Phylogeny of beta1,4-galactosyltransferases.";
RL   Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; AM231267; CAJ77200.1; -; mRNA.
DR   RefSeq; NP_001072098.1; -.
DR   UniGene; Tru.3653; -.
DR   CAZy; GT7; Glycosyltransferase Family 7.
DR   Ensembl; ENSTRUT00000021947; ENSTRUP00000021858; ENSTRUG00000008706; Takifugu rubripes.
DR   GeneID; 778009; -.
DR   CTD; 778009; -.
DR   eggNOG; fiNOG08907; -.
DR   GO; GO:0046525; F:xylosylprotein 4-beta-galactosyltransferase...; IEA:EC.
DR   GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR   InterPro; IPR003859; Galactosyl_T_2.
DR   PANTHER; PTHR19300; Galactosyl_T_2; 1.
PE   2: Evidence at transcript level;
KW   Glycosyltransferase; Transferase.
SQ   SEQUENCE   317 AA;  36672 MW;  DA3B946E1934C1F0 CRC64;
     MMYPSRRKPV LYFKEERRCT IYKLFIVCTV LLLVSLLWLQ LSCSGDMTSS AEDRPQLLPQ
     QRPPPCQAEA QASAADDPSW GPHKLAVIVP FRERFEELLV FVPFMHGFLS KKKIRHKILV
     INQVDRYRFN RASLINVGHL ESGNDTDYLA MHDVDLLPLN DALDYGFPEE GPFHVASPEL
     HPLYHYKTYV GGILLLTKKH YDMCNGMSNR FWGWGREDDE FYRRLKKAQL QLFRPSGITT
     GYKTFLHIHD PAWRKRDQKR VAAQKQEQFK VDPEGGLSNL RYEVESRQEV VIGGAPCTVI
     NTRLGCDQNQ TPWCMLG
//
ID   Q2HWR4_TAKRU            Unreviewed;       217 AA.
AC   Q2HWR4;
DT   21-MAR-2006, integrated into UniProtKB/TrEMBL.
DT   21-MAR-2006, sequence version 1.
DT   02-MAR-2010, entry version 23.
DE   SubName: Full=T-cell surface glycoprotein CD8alpha;
GN   Name=CD8alpha;
OS   Takifugu rubripes (Japanese pufferfish) (Fugu rubripes).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Euteleostei; Neoteleostei;
OC   Acanthomorpha; Acanthopterygii; Percomorpha; Tetraodontiformes;
OC   Tetradontoidea; Tetraodontidae; Takifugu.
OX   NCBI_TaxID=31033;
RN   [1]
RP   NUCLEOTIDE SEQUENCE.
RA   Suetake H., Saha N.R., Araki K., Akatsu K., Kikuchi K., Suzuki Y.;
RT   "Lymphocyte surface marker genes in fugu.";
RL   Comp. Biochem. Physiol. Part D Genomics Proteomics 1:102-108(2006).
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DR   EMBL; AB232548; BAE79813.1; -; mRNA.
DR   RefSeq; NP_001072086.1; -.
DR   UniGene; Tru.3654; -.
DR   SMR; Q2HWR4; 26-124.
DR   Ensembl; ENSTRUT00000038247; ENSTRUP00000038110; ENSTRUG00000014906; Takifugu rubripes.
DR   GeneID; 777995; -.
DR   CTD; 777995; -.
DR   InParanoid; Q2HWR4; -.
DR   InterPro; IPR015468; CD8_asu.
DR   InterPro; IPR007110; Ig-like.
DR   InterPro; IPR013783; Ig-like_fold.
DR   InterPro; IPR003599; Ig_sub.
DR   InterPro; IPR013106; Ig_V-set.
DR   Gene3D; G3DSA:2.60.40.10; Ig-like_fold; 1.
DR   PANTHER; PTHR10441; CD8_alpha; 1.
DR   Pfam; PF07686; V-set; 1.
DR   SMART; SM00409; IG; 1.
DR   PROSITE; PS50835; IG_LIKE; 1.
PE   2: Evidence at transcript level;
SQ   SEQUENCE   217 AA;  24169 MW;  11B791A87D22A954 CRC64;
     MEQKWRKVLV FLVFCQQTTP GDNQKEDVVK EGAQVDIHCQ PSQAASMTVW FRVRDNSWME
     FIGSFSNGLK KTENNVSSEF THGKINRDIL TLKSFQRQKD SGLYCCASLY KGKELRFGPV
     TQLRGETVEQ KPTVAQTTPR QQPVTTAPAC TCDSSKARGG IGTQLSCAPL ILGPLAGGCG
     LLLLLLIVTA LYCNRVRTRR CPHHYKRKPR GKPPGNK
//
ID   Q2KT90_TAKRU            Unreviewed;       230 AA.
AC   Q2KT90;
DT   07-MAR-2006, integrated into UniProtKB/TrEMBL.
DT   07-MAR-2006, sequence version 1.
DT   15-JUN-2010, entry version 31.
DE   RecName: Full=Cytochrome c oxidase subunit 2;
GN   Name=COII;
OS   Takifugu rubripes (Japanese pufferfish) (Fugu rubripes).
OG   Mitochondrion.
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Euteleostei; Neoteleostei;
OC   Acanthomorpha; Acanthopterygii; Percomorpha; Tetraodontiformes;
OC   Tetradontoidea; Tetraodontidae; Takifugu.
OX   NCBI_TaxID=31033;
RN   [1]
RP   NUCLEOTIDE SEQUENCE.
RX   PubMed=16607039; DOI=10.1266/ggs.81.29;
RA   Yamanoue Y., Miya M., Inoue J.G., Matsuura K., Nishida M.;
RT   "The mitochondrial genome of spotted green pufferfish Tetraodon
RT   nigroviridis (Teleostei: Tetraodontiformes) and divergence time
RT   estimation among model organisms in fishes.";
RL   Genes Genet. Syst. 81:29-39(2006).
CC   -!- FUNCTION: Cytochrome c oxidase is the component of the respiratory
CC       chain that catalyzes the reduction of oxygen to water. Subunits 1-
CC       3 form the functional core of the enzyme complex. Subunit 2
CC       transfers the electrons from cytochrome c via its binuclear copper
CC       A center to the bimetallic center of the catalytic subunit 1 (By
CC       similarity).
CC   -!- COFACTOR: Copper A (By similarity).
CC   -!- SUBCELLULAR LOCATION: Mitochondrion inner membrane; Multi-pass
CC       membrane protein (By similarity).
CC   -!- SIMILARITY: Belongs to the cytochrome c oxidase subunit 2 family.
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DR   EMBL; AP006045; BAE79207.1; -; Genomic_DNA.
DR   SMR; Q2KT90; 1-227.
DR   Ensembl; ENSTRUT00000047994; ENSTRUP00000047832; ENSTRUG00000018676; Takifugu rubripes.
DR   InParanoid; Q2KT90; -.
DR   GO; GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005743; C:mitochondrial inner membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0070469; C:respiratory chain; IEA:UniProtKB-KW.
DR   GO; GO:0005507; F:copper ion binding; IEA:InterPro.
DR   GO; GO:0004129; F:cytochrome-c oxidase activity; IEA:InterPro.
DR   GO; GO:0009055; F:electron carrier activity; IEA:InterPro.
DR   GO; GO:0020037; F:heme binding; IEA:InterPro.
DR   GO; GO:0022904; P:respiratory electron transport chain; IEA:InterPro.
DR   GO; GO:0006810; P:transport; IEA:UniProtKB-KW.
DR   InterPro; IPR001505; Copper_CuA.
DR   InterPro; IPR008972; Cupredoxin.
DR   InterPro; IPR014222; Cyt_c_oxidase_su2.
DR   InterPro; IPR015964; Cyt_c_oxidase_su2-like_TM_dom.
DR   InterPro; IPR002429; Cyt_c_oxidase_su2_C.
DR   InterPro; IPR011759; Cyt_c_oxidase_su2_TM_dom.
DR   Gene3D; G3DSA:1.10.287.90; COX2_TM; 1.
DR   Gene3D; G3DSA:2.60.40.420; Cupredoxin; 1.
DR   PANTHER; PTHR22888; COX2_C; 1.
DR   Pfam; PF00116; COX2; 1.
DR   Pfam; PF02790; COX2_TM; 1.
DR   PRINTS; PR01166; CYCOXIDASEII.
DR   SUPFAM; SSF49503; Cupredoxin; 1.
DR   SUPFAM; SSF81464; Cyt_c_oxidase_II-like_TM; 1.
DR   TIGRFAMs; TIGR02866; CoxB; 1.
DR   PROSITE; PS00078; COX2; 1.
DR   PROSITE; PS50857; COX2_CUA; 1.
DR   PROSITE; PS50999; COX2_TM; 1.
PE   3: Inferred from homology;
KW   Copper; Electron transport; Membrane; Metal-binding; Mitochondrion;
KW   Mitochondrion inner membrane; Respiratory chain; Transmembrane;
KW   Transport.
SQ   SEQUENCE   230 AA;  26042 MW;  19C6D6E9BDB9D12C CRC64;
     MAHPSQLGFQ DAASPVMEEL LHFHDHALMI VFLISTLVLY IIVAMVSTKL TNKYILDSQE
     IEIIWTILPA IILILIALPS LRILYLMDEI NDPHLTIKAM GHQWYWSYEY TDYSDLAFDS
     YMVPTQDLAP GQFRLLETDH RMVVPVDSPI RILVSAEDVL HSWAVPSLGV KMDAVPGRLN
     QTAFILSRPG VFYGQCSEIC GANHSFMPIV VEAVPLEHFE NWSSLMLEDA
//
ID   Q4JHL5_TAKRU            Unreviewed;       854 AA.
AC   Q4JHL5;
DT   02-AUG-2005, integrated into UniProtKB/TrEMBL.
DT   02-AUG-2005, sequence version 1.
DT   15-JUN-2010, entry version 31.
DE   SubName: Full=Aryl hydrocarbon receptor 1B;
OS   Takifugu rubripes (Japanese pufferfish) (Fugu rubripes).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Euteleostei; Neoteleostei;
OC   Acanthomorpha; Acanthopterygii; Percomorpha; Tetraodontiformes;
OC   Tetradontoidea; Tetraodontidae; Takifugu.
OX   NCBI_TaxID=31033;
RN   [1]
RP   NUCLEOTIDE SEQUENCE.
RX   PubMed=19539383; DOI=10.1016/j.aquatox.2009.05.015;
RA   Merson R.R., Karchner S.I., Hahn M.E.;
RT   "Interaction of fish aryl hydrocarbon receptor paralogs (AHR1 and
RT   AHR2) with the retinoblastoma protein.";
RL   Aquat. Toxicol. 94:47-55(2009).
CC   -!- SIMILARITY: Contains 1 basic helix-loop-helix (bHLH) domain.
CC   -!- SIMILARITY: Contains 2 PAS (PER-ARNT-SIM) domains.
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DR   EMBL; DQ088138; AAY96630.1; -; mRNA.
DR   RefSeq; NP_001033048.1; -.
DR   UniGene; Tru.3516; -.
DR   SMR; Q4JHL5; 119-384.
DR   GeneID; 654292; -.
DR   CTD; 654292; -.
DR   eggNOG; veNOG06416; -.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0004872; F:receptor activity; IEA:UniProtKB-KW.
DR   GO; GO:0030528; F:transcription regulator activity; IEA:InterPro.
DR   GO; GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
DR   GO; GO:0007165; P:signal transduction; IEA:InterPro.
DR   GO; GO:0006350; P:transcription; IEA:UniProtKB-KW.
DR   InterPro; IPR001092; HLH_DNA-bd_dom.
DR   InterPro; IPR001610; PAC.
DR   InterPro; IPR000014; PAS.
DR   InterPro; IPR013767; PAS_fold.
DR   InterPro; IPR013655; PAS_fold_3.
DR   Pfam; PF00989; PAS; 1.
DR   Pfam; PF08447; PAS_3; 1.
DR   SMART; SM00353; HLH; 1.
DR   SMART; SM00086; PAC; 1.
DR   SMART; SM00091; PAS; 2.
DR   PROSITE; PS50888; HLH; 1.
DR   PROSITE; PS50112; PAS; 1.
PE   2: Evidence at transcript level;
KW   DNA-binding; Nucleus; Receptor; Repeat; Transcription;
KW   Transcription regulation.
SQ   SEQUENCE   854 AA;  93640 MW;  C6B5B41CFE5BCB96 CRC64;
     MYAGRKRRKP LQKGVKPAPT EGAKSNPSKR HRDRLNSELD RLASLLPFSE DVIASLDKLS
     ILRLSVSFLR TKGFFSGVLN NLPSDGINKS SDHGGGGGAA SGAEERRLPE GELLLQALNG
     FVLVVTTEGN IFFCSHTIRD YLGFHQTDVM HQSVFEMIHT EDQQEFRRNL HWGPDTTPTA
     EPETDGESVS TSSLLSCDPD QPPRDNSSFL DRSFICRFRC LLDNTSGFLA LNIQGRLKFL
     HGQHHPQRSS KVSSPPQLAL FAIATPLQPP TILEIRTRNM IFRTKHKLDF TPMACDAKGK
     IVLGYTEAEL RVRGSGYQFI HAADMLYCAE NHVRMIKTGE SGLTVFRLLT KDNRWKWVQA
     NARLVYKNGK PDYIVATQRP LVDEEGGEHL RKRSMHLPFT FATGEAMLYQ TGHPLHSFSE
     SVQGKAKGSK TKKGKQSSSD NLDPKSLLGA LMSQDESVYV CQPDSEPAVS GPSSLLSQQQ
     TDSECSSFLG HNSLHVFSNE TSSYDPLLAT LDSLTLDGED PCSNTEIFNA LENLGLNAED
     LELLLLDERM IQVELGPNHI PTLSDLLTNN EILSYIHNKL ENSPEPADGD AGRYGVNADQ
     AAVPEPPAFV QQSQQMQQHV GSGVPAKAAP PTAEAKGQTR LPNGHWVTNT ANAHQPDNQV
     QPHPVLTPSR LNSELKHLLE SSQQWSQDQL VHYPSHPQVS QDPSLLGFHN QRTINASYIP
     NGHTSFLPSV EVGHTYSITA APCAPAALLN GLTAPDVCHY QSYQQQVSVA QSSTLELEQL
     LGLSQSQHSL PAYAMFNTSA QGSAHSKLEN GCLLNATNAA YIRTCLMPNG NAVVAANVDG
     LSTLQDHQKP GFLL
//
ID   Q50J40_TAKRU            Unreviewed;       372 AA.
AC   Q50J40;
DT   07-JUN-2005, integrated into UniProtKB/TrEMBL.
DT   07-JUN-2005, sequence version 1.
DT   02-MAR-2010, entry version 20.
DE   SubName: Full=Alpha-2,8-sialyltransferase;
DE   Flags: Fragment;
GN   Name=st8Sia V;
OS   Takifugu rubripes (Japanese pufferfish) (Fugu rubripes).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Euteleostei; Neoteleostei;
OC   Acanthomorpha; Acanthopterygii; Percomorpha; Tetraodontiformes;
OC   Tetradontoidea; Tetraodontidae; Takifugu.
OX   NCBI_TaxID=31033;
RN   [1]
RP   NUCLEOTIDE SEQUENCE.
RA   Lehmann F.;
RT   "Phylogeny of sialyltransferases.";
RL   Submitted (MAY-2004) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; AJ705092; CAG29214.1; -; mRNA.
DR   Ensembl; ENSTRUT00000046394; ENSTRUP00000046238; ENSTRUG00000018059; Takifugu rubripes.
DR   eggNOG; fiNOG06649; -.
DR   PhylomeDB; Q50J40; -.
DR   GO; GO:0030173; C:integral to Golgi membrane; IEA:InterPro.
DR   GO; GO:0008373; F:sialyltransferase activity; IEA:InterPro.
DR   GO; GO:0006486; P:protein amino acid glycosylation; IEA:InterPro.
DR   InterPro; IPR001675; Glyco_trans_29.
DR   InterPro; IPR012163; Sialyl_trans.
DR   Pfam; PF00777; Glyco_transf_29; 1.
DR   PIRSF; PIRSF005557; Sialyl_trans; 1.
PE   2: Evidence at transcript level;
KW   Glycosyltransferase; Golgi apparatus; Membrane; Transferase;
KW   Transmembrane.
FT   NON_TER       1      1
FT   NON_TER     372    372
SQ   SEQUENCE   372 AA;  42962 MW;  74842EC22385F239 CRC64;
     YADTSSGKDI LGNRSLCFIF ICAFGLVTLI QQILSGKNYI KRYLGNYDGP FEYNSTTCRE
     LRQEIMDVKV LTMVKTSDLF ERWRNLQICR WEQNKEETSN FKMSLSRCCN APSFLFTTKR
     NTPAGTKLRY EVDTSGILPI TAEVFKMFPD DMPYSKSQFK KCAVVGNGGI IKNSKCGKEI
     DSADFVFRCN IPPISEKYSA DVGTKTDLVS INPSIITERF QKLEKWRRPF YEVLQNYENS
     SAVLPAFYNT RNTDVSFRVK YMLDDFDSQR GVFFFHPQYL LNVQRFWAVQ GVRAKRLSSG
     LMLVTAALEM CEEVHLYGFW AFPMNPSGIF ITHHYYDNVK PRPGFHAMPH EIFNFIHMHT
     RGIVNVHTGQ CT
//
ID   Q68HA9_TAKRU            Unreviewed;       606 AA.
AC   Q68HA9;
DT   11-OCT-2004, integrated into UniProtKB/TrEMBL.
DT   11-OCT-2004, sequence version 1.
DT   18-MAY-2010, entry version 28.
DE   SubName: Full=E1A-associated protein p300;
DE   Flags: Fragment;
GN   Name=EP300;
OS   Takifugu rubripes (Japanese pufferfish) (Fugu rubripes).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Euteleostei; Neoteleostei;
OC   Acanthomorpha; Acanthopterygii; Percomorpha; Tetraodontiformes;
OC   Tetradontoidea; Tetraodontidae; Takifugu.
OX   NCBI_TaxID=31033;
RN   [1]
RP   NUCLEOTIDE SEQUENCE.
RA   Fernandes J.M., Mackenzie M.G., Kinghorn J.R., Johnston I.A.;
RT   "Cloning and characterization of the E1A-associated protein p300 gene
RT   in Takifugu rubripes.";
RL   Submitted (JUL-2004) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; AY690625; AAT99578.1; -; mRNA.
DR   UniGene; Tru.1841; -.
DR   SMR; Q68HA9; 311-409, 551-606.
DR   Ensembl; ENSTRUT00000016334; ENSTRUP00000016262; ENSTRUG00000006616; Takifugu rubripes.
DR   eggNOG; veNOG10326; -.
DR   InParanoid; Q68HA9; -.
DR   GO; GO:0005634; C:nucleus; IEA:InterPro.
DR   GO; GO:0004402; F:histone acetyltransferase activity; IEA:InterPro.
DR   GO; GO:0003712; F:transcription cofactor activity; IEA:InterPro.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
DR   InterPro; IPR003101; KIX.
DR   InterPro; IPR000197; Znf_TAZ.
DR   Gene3D; G3DSA:1.10.246.20; KIX; 1.
DR   Gene3D; G3DSA:1.20.1020.10; Znf_TAZ; 1.
DR   Pfam; PF02172; KIX; 1.
DR   Pfam; PF02135; zf-TAZ; 1.
DR   SMART; SM00551; ZnF_TAZ; 1.
DR   SUPFAM; SSF47040; KIX; 1.
DR   SUPFAM; SSF57933; TAZ_finger; 1.
DR   PROSITE; PS50952; KIX; 1.
DR   PROSITE; PS50134; ZF_TAZ; 1.
PE   2: Evidence at transcript level;
FT   NON_TER     606    606
SQ   SEQUENCE   606 AA;  62682 MW;  B60774021C25DA7A CRC64;
     MADNVLDSGA PSAKRPKLSS PALSVSASDG NDFGSPFELE QDLPDELISS ADLGLSNGGD
     LSQLHTSPSG PLGGLGLGGQ DAASKHKQLS ELLRAGAPPQ QGVPASNSTA PGAPMGMMGG
     VGVSPGGPQG MHPHGQPQQP GLMPQVGMVG GVAALSRVAA MMGTQKGNPG QQPHGMMGGQ
     VMNGSPRMGY PGNTGMGNNS NLLADTLQQQ QQQGGQQMVP GAQATMRPQQ PGALNKMNMM
     ANTGPYAGPY SQSAGQALPG AGLGSPLQNK ASMPNMLNQF NVDKKTLPGM LTAATGVGPV
     GLGPVGVGPS AGPPTADPEK RKLIQQQLVL LLHAHKCQRR EQANGEVRQC NLPHCRTMKN
     VLNHMTHCQA GKSCQVAHCA SSRQIISHWK NCTRHDCPVC LPLKNAGDKR NQQSLLNSAG
     VGLVNSLGAG LPGGQSNNPN LNPPNQIDPS SIERAYAALG LTYQGNQMPQ QPSQPNMPTQ
     GLQGQPGMGA LNSMGGNSMG VNGGVGVQPP NQQSAVLSNA MLHSNMNAQS LLNDGVANVG
     SMPTAAPSAA GIRKSWHEDI TQDLRNHLVH KLVQAIFPTP DPAALKDRRM ENLVAYARKV
     EGDMYE
//