This file is indexed.

/usr/share/EMBOSS/test/data/dna.msf8 is in emboss-test 6.4.0-2.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

 1
 2
 3
 4
 5
 6
 7
 8
 9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
PileUp of: fasta*.gcg

 Symbol comparison table: GenRunData:pileupdna.cmp  CompCheck: 6876

                   GapWeight: 5.000
             GapLengthWeight: 0.300 

 dna.msf8  MSF: 121  Type: N  December 15, 1998 15:24  Check: 3494 ..

 Name: fastam1          Len:   121  Check: 8742  Weight:  1.00
 Name: fastam2          Len:   121  Check: 6333  Weight:  1.00
 Name: fastam3          Len:   121  Check: 8419  Weight:  1.00

//

         1                                                   50
fastam1  ACGTACGTAC GTACGTACGT ACGTACGTAC GTACGTACGT ACGTACGTAC 
fastam2  ACGTACGTAC GTACGTACGT ....ACGTAC GTACGTACGT ACGTACGTAC 
fastam3  ACGTACGTAC GTACGTACGT ACGTACGTAC GTACGTACGT .CGTACGTAC 

         51                                                 100
fastam1  GTACGTACGT ACGTACGTAC GTACGTACGT .ACGTACGTA CGTACGTACG 
fastam2  GTACGTACGT ACGTACGTAC GTACGTACGT .ACGTACGTA CGTACGTACG 
fastam3  GTACGTACGT ACGTACGTAC GTACGTACGT AACGTACGTA CGTACGTACG 

         101                 121
fastam1  TACGTACGTA CGTACGTACG T
fastam2  TACGTACGTT GCAACGTACG T
fastam3  TACGTACGTA CGTACGTACG T