This file is indexed.

/usr/share/avogadro/fragments/cyclic sugars/alpha-D-lyxopyranose.cml is in avogadro-data 1.0.3-5.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

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<?xml version="1.0"?>
<molecule xmlns="http://www.xml-cml.org/schema" id="alpha-D-lyxopyranose.out">
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 </atomArray>
 <bondArray>
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  <bond atomRefs2="a5 a20" order="1"/>
 </bondArray>
</molecule>