/usr/share/avogadro/fragments/coordination/6-octahedral.cml is in avogadro-data 1.0.3-5.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 | <molecule>
<atomArray>
<atom id="a1" elementType="Fe" x3="-0.564796" y3="-0.178884" z3="0.171429"/>
<atom id="a2" elementType="Cl" x3="-2.027991" y3="-0.483447" z3="-1.552654"/>
<atom id="a3" elementType="Cl" x3="0.898323" y3="0.125647" z3="1.895507"/>
<atom id="a4" elementType="Cl" x3="0.099315" y3="1.803493" z3="-0.742382"/>
<atom id="a5" elementType="Cl" x3="-1.228981" y3="-2.161296" z3="1.085241"/>
<atom id="a6" elementType="Cl" x3="-2.184744" y3="0.908941" z3="1.354023"/>
<atom id="a7" elementType="Cl" x3="1.055077" y3="-1.266738" z3="-1.011164"/>
</atomArray>
<bondArray>
<bond atomRefs2=" a1 a2" order=" 1"/>
<bond atomRefs2=" a1 a3" order=" 1"/>
<bond atomRefs2=" a1 a4" order=" 1"/>
<bond atomRefs2=" a1 a5" order=" 1"/>
<bond atomRefs2=" a1 a6" order=" 1"/>
<bond atomRefs2=" a1 a7" order=" 1"/>
</bondArray>
</molecule>
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