This file is indexed.

/usr/lib/R/library/Matrix/INDEX is in r-cran-matrix 1.2-7.1-1.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
%&%-methods             Boolean Arithmetic Matrix Products: '%&%' and
                        Methods
%*%-methods             Matrix (Cross) Products (of Transpose)
BunchKaufman-methods    Bunch-Kaufman Decomposition Methods
CAex                    Albers' example Matrix with "Difficult" Eigen
                        Factorization
CHMfactor-class         CHOLMOD-based Cholesky Factorizations
Cholesky                Cholesky Decomposition of a Sparse Matrix
Cholesky-class          Cholesky and Bunch-Kaufman Decompositions
CsparseMatrix-class     Class "CsparseMatrix" of Sparse Matrices in
                        Column-compressed Form
Diagonal                Create Diagonal Matrix Object
Hilbert                 Generate a Hilbert matrix
KNex                    Koenker-Ng Example Sparse Model Matrix and
                        Response Vector
KhatriRao               Khatri-Rao Matrix Product
LU-class                LU (dense) Matrix Decompositions
Matrix                  Construct a Classed Matrix
Matrix-class            Virtual Class "Matrix" Class of Matrices
MatrixClass             The Matrix (Super-) Class of a Class
MatrixFactorization-class
                        Class "MatrixFactorization" of Matrix
                        Factorizations
RsparseMatrix-class     Class "RsparseMatrix" of Sparse Matrices in
                        Column-compressed Form
Schur                   Schur Decomposition of a Matrix
Schur-class             Class "Schur" of Schur Matrix Factorizations
SparseM-coerce-methods
                        Sparse Matrix Coercion from and to those from
                        package 'SparseM'
TsparseMatrix-class     Class "TsparseMatrix" of Sparse Matrices in
                        Triplet Form
USCounties              USCounties Contiguity Matrix
[-methods               Methods for "[": Extraction or Subsetting in
                        Package 'Matrix'
[<--methods             Methods for "[<-" - Assigning to Subsets for
                        'Matrix'
abIndex-class           Class "abIndex" of Abstract Index Vectors
abIseq                  Sequence Generation of "abIndex", Abstract
                        Index Vectors
all-methods             "Matrix" Methods for Functions all() and any()
all.equal-methods       Matrix Package Methods for Function all.equal()
atomicVector-class      Virtual Class "atomicVector" of Atomic Vectors
band                    Extract bands of a matrix
bandSparse              Construct Sparse Banded Matrix from
                        (Sup-/Super-) Diagonals
bdiag                   Construct a Block Diagonal Matrix
cBind                   Versions of 'cbind' and 'rbind' recursively
                        built on cbind2/rbind2
chol                    Choleski Decomposition - 'Matrix' S4 Generic
                        and Methods
chol2inv-methods        Inverse from Choleski or QR Decomposition -
                        Matrix Methods
colSums                 Form Row and Column Sums and Means
compMatrix-class        Class "compMatrix" of Composite (Factorizable)
                        Matrices
condest                 Compute Approximate CONDition number and 1-Norm
                        of (Large) Matrices
dMatrix-class           (Virtual) Class "dMatrix" of "double" Matrices
ddenseMatrix-class      Virtual Class "ddenseMatrix" of Numeric Dense
                        Matrices
ddiMatrix-class         Class "ddiMatrix" of Diagonal Numeric Matrices
denseMatrix-class       Virtual Class "denseMatrix" of All Dense
                        Matrices
dgCMatrix-class         Compressed, sparse, column-oriented numeric
                        matrices
dgRMatrix-class         Sparse Compressed, Row-oriented Numeric
                        Matrices
dgTMatrix-class         Sparse matrices in triplet form
dgeMatrix-class         Class "dgeMatrix" of Dense Numeric (S4 Class)
                        Matrices
diagU2N                 Transform Triangular Matrices from Unit
                        Triangular to General Triangular and Back
diagonalMatrix-class    Class "diagonalMatrix" of Diagonal Matrices
dpoMatrix-class         Positive Semi-definite Dense Numeric Matrices
drop0                   Drop "Explicit Zeroes" from a Sparse Matrix
dsCMatrix-class         Numeric Symmetric Sparse (column compressed)
                        Matrices
dsRMatrix-class         Symmetric Sparse Compressed Row Matrices
dsparseMatrix-class     Virtual Class "dsparseMatrix" of Numeric Sparse
                        Matrices
dsyMatrix-class         Symmetric Dense Numeric Matrices
dtCMatrix-class         Triangular, (compressed) sparse column matrices
dtRMatrix-class         Triangular Sparse Compressed Row Matrices
dtpMatrix-class         Packed Triangular Dense Matrices - "dtpMatrix"
dtrMatrix-class         Triangular, dense, numeric matrices
expand                  Expand a Decomposition into Factors
expm                    Matrix Exponential
facmul                  Multiplication by Decomposition Factors
forceSymmetric          Force a Matrix to 'symmetricMatrix' Without
                        Symmetry Checks
formatSparseM           Formatting Sparse Numeric Matrices Utilities
generalMatrix-class     Class "generalMatrix" of General Matrices
graph2T                 Conversions "graph" <-> (sparse) Matrix
iMatrix-class           Virtual Classes Not Yet Really Implemented and
                        Used
image-methods           Methods for image() in Package 'Matrix'
indMatrix-class         Index Matrices
index-class             Virtual Class "index" - Simple Class for Matrix
                        Indices
invPerm                 Inverse Permutation Vector
is.na-methods           is.na(), is.infinite() Methods for 'Matrix'
                        Objects
is.null.DN              Are the Dimnames 'dn' NULL-like ?
isSymmetric-methods     Methods for Function isSymmetric in Package
                        'Matrix'
isTriangular            isTriangular() and isDiagonal() Methods
kronecker-methods       Methods for Function 'kronecker()' in Package
                        'Matrix'
ldenseMatrix-class      Virtual Class "ldenseMatrix" of Dense Logical
                        Matrices
ldiMatrix-class         Class "ldiMatrix" of Diagonal Logical Matrices
lgeMatrix-class         Class "lgeMatrix" of General Dense Logical
                        Matrices
lsparseMatrix-class     Sparse logical matrices
lsyMatrix-class         Symmetric Dense Logical Matrices
ltrMatrix-class         Triangular Dense Logical Matrices
lu                      (Generalized) Triangular Decomposition of a
                        Matrix
nMatrix-class           Class "nMatrix" of Non-zero Pattern Matrices
ndenseMatrix-class      Virtual Class "ndenseMatrix" of Dense Logical
                        Matrices
nearPD                  Nearest Positive Definite Matrix
ngeMatrix-class         Class "ngeMatrix" of General Dense
                        Nonzero-pattern Matrices
nnzero                  The Number of Non-Zero Values of a Matrix
norm                    Matrix Norms
nsparseMatrix-class     Sparse "pattern" Matrices
nsyMatrix-class         Symmetric Dense Nonzero-Pattern Matrices
ntrMatrix-class         Triangular Dense Logical Matrices
number-class            Class "number" of Possibly Complex Numbers
pMatrix-class           Permutation matrices
printSpMatrix           Format and Print Sparse Matrices Flexibly
qr-methods              QR Decomposition - S4 Methods and Generic
rankMatrix              Rank of a Matrix
rcond                   Estimate the Reciprocal Condition Number
readHB                  Read and write external matrix formats
rep2abI                 Replicate Vectors into 'abIndex' Result
replValue-class         Virtual Class "replValue" - Simple Class for
                        subassignment Values
rleDiff-class           Class "rleDiff" of rle(diff(.)) Stored Vectors
rsparsematrix           Random Sparse Matrix
solve-methods           Methods in Package Matrix for Function
                        'solve()'
spMatrix                Sparse Matrix Constructor From Triplet
sparse.model.matrix     Construct Sparse Design / Model Matrices
sparseLU-class          Sparse LU decomposition of a square sparse
                        matrix
sparseMatrix            General Sparse Matrix Construction from Nonzero
                        Entries
sparseMatrix-class      Virtual Class "sparseMatrix" - Mother of Sparse
                        Matrices
sparseQR-class          Sparse QR decomposition of a sparse matrix
sparseVector            Sparse Vector Construction from Nonzero Entries
sparseVector-class      Sparse Vector Classes
symmetricMatrix-class   Virtual Class of Symmetric Matrices in Package
                        Matrix
symmpart                Symmetric Part and Skew(symmetric) Part of a
                        Matrix
triangularMatrix-class
                        Virtual Class of Triangular Matrices in Package
                        Matrix
uniqTsparse             Unique TsparseMatrix Representations
unpack                  Representation of Packed and Unpacked (Dense)
                        Matrices
updown                  Up- and Down-Dating a Cholesky Decomposition