/usr/lib/R/site-library/BoolNet/NAMESPACE is in r-cran-boolnet 2.1.3-1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 | useDynLib(BoolNet)
import("igraph", "XML")
importFrom("graphics", "abline", "arrows", "axis", "hist", "legend", "lines", "par", "plot", "rect", "text")
importFrom("grDevices", "dev.interactive")
importFrom("stats", "dist", "kmeans", "quantile", "rnorm", "rpois", "runif")
importFrom("utils", "installed.packages", "tail")
importFrom("grDevices", "adjustcolor")
S3method(print, AttractorInfo)
S3method(print, SymbolicSimulation)
S3method(print, BooleanNetwork)
S3method(print, SymbolicBooleanNetwork)
S3method(print, BooleanNetworkCollection)
S3method(print, ProbabilisticBooleanNetwork)
S3method(print, BooleanStateInfo)
S3method(print, TransitionTable)
S3method(print, MarkovSimulation)
export(
loadNetwork,
loadBioTapestry,
loadSBML,
saveNetwork,
getAttractors,
plotAttractors,
plotSequence,
plotStateGraph,
plotNetworkWiring,
plotPBNTransitions,
attractorsToLaTeX,
sequenceToLaTeX,
stateTransition,
getAttractorSequence,
getTransitionTable,
getStateSummary,
getBasinOfAttraction,
getPathToAttractor,
getTransitionProbabilities,
toPajek,
toSBML,
generateRandomNKNetwork,
generateCanalyzing,
generateNestedCanalyzing,
generateState,
generateTimeSeries,
perturbNetwork,
perturbTrajectories,
simplifyNetwork,
simulateSymbolicModel,
reconstructNetwork,
chooseNetwork,
fixGenes,
binarizeTimeSeries,
markovSimulation,
testNetworkProperties,
testAttractorRobustness,
testTransitionRobustness,
testIndegree,
truthTableToSymbolic,
symbolicToTruthTable)
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