/usr/lib/R/ is in r-bioc-variantannotation 1.20.2-1+b1.
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/usr/lib/R/site-library/
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/usr/lib/R/site-library/VariantAnnotation/
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/usr/lib/R/site-library/VariantAnnotation/CITATION
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/usr/lib/R/site-library/VariantAnnotation/DESCRIPTION
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/usr/lib/R/site-library/VariantAnnotation/INDEX
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/usr/lib/R/site-library/VariantAnnotation/Meta/
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/usr/lib/R/site-library/VariantAnnotation/Meta/Rd.rds
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/usr/lib/R/site-library/VariantAnnotation/NAMESPACE
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/usr/lib/R/site-library/VariantAnnotation/NEWS
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/usr/lib/R/site-library/VariantAnnotation/R/
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/usr/lib/R/site-library/VariantAnnotation/R/VariantAnnotation
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/usr/lib/R/site-library/VariantAnnotation/R/VariantAnnotation.rdb
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/usr/lib/R/site-library/VariantAnnotation/R/VariantAnnotation.rdx
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/usr/lib/R/site-library/VariantAnnotation/doc/
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/usr/lib/R/site-library/VariantAnnotation/doc/VariantAnnotation.R
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/usr/lib/R/site-library/VariantAnnotation/doc/VariantAnnotation.Rnw
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/usr/lib/R/site-library/VariantAnnotation/doc/VariantAnnotation.pdf
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/usr/lib/R/site-library/VariantAnnotation/doc/filterVcf.R
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/usr/lib/R/site-library/VariantAnnotation/doc/filterVcf.Rnw
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/usr/lib/R/site-library/VariantAnnotation/doc/filterVcf.pdf
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/usr/lib/R/site-library/VariantAnnotation/doc/index.html
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/usr/lib/R/site-library/VariantAnnotation/extdata/
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/usr/lib/R/site-library/VariantAnnotation/extdata/chr22.vcf.gz
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/usr/lib/R/site-library/VariantAnnotation/extdata/chr22.vcf.gz.tbi
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/usr/lib/R/site-library/VariantAnnotation/extdata/chr7-sub.vcf.gz
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/usr/lib/R/site-library/VariantAnnotation/extdata/chr7-sub.vcf.gz.tbi
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/usr/lib/R/site-library/VariantAnnotation/extdata/ex2.vcf
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/usr/lib/R/site-library/VariantAnnotation/extdata/gl_chr1.vcf
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/usr/lib/R/site-library/VariantAnnotation/extdata/h1187-10k.vcf.gz
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/usr/lib/R/site-library/VariantAnnotation/extdata/hapmap_exome_chr22.vcf.gz
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/usr/lib/R/site-library/VariantAnnotation/extdata/structural.vcf
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/usr/lib/R/site-library/VariantAnnotation/help/
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/usr/lib/R/site-library/VariantAnnotation/help/AnIndex
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/usr/lib/R/site-library/VariantAnnotation/help/VariantAnnotation.rdb
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/usr/lib/R/site-library/VariantAnnotation/help/VariantAnnotation.rdx
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/usr/lib/R/site-library/VariantAnnotation/help/aliases.rds
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/usr/lib/R/site-library/VariantAnnotation/help/paths.rds
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/usr/lib/R/site-library/VariantAnnotation/html/
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/usr/lib/R/site-library/VariantAnnotation/html/00Index.html
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/usr/lib/R/site-library/VariantAnnotation/html/R.css
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/usr/lib/R/site-library/VariantAnnotation/libs/
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/usr/lib/R/site-library/VariantAnnotation/libs/VariantAnnotation.so
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/usr/lib/R/site-library/VariantAnnotation/scripts/
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/usr/lib/R/site-library/VariantAnnotation/scripts/test_Rplinkseq.R
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/usr/lib/R/site-library/VariantAnnotation/unitTests/
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/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/
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/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/FORMAT_header_no_SAMPLEs.vcf
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/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/VarScan_header.vcf
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/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/banded_gvcf.vcf
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/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/expand.vcf
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/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/fewer-FORMAT-than-GENO.vcf
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/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/missing-FORMAT-metadata-elt.vcf
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/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/mixedStructural.vcf
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/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/multiple_INFO_fields.vcf
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/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/negative_FORMAT_Number.vcf
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/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/no_FORMAT_column.vcf
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/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/no_GENO_row.vcf
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/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/no_INFO_header.vcf
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/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/unspecified_INFO_FORMAT_fields.vcf
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/usr/lib/R/site-library/VariantAnnotation/unitTests/test_ScanVcfParam-class.R
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/usr/lib/R/site-library/VariantAnnotation/unitTests/test_VCF-class.R
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/usr/lib/R/site-library/VariantAnnotation/unitTests/test_VRanges-class.R
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/usr/lib/R/site-library/VariantAnnotation/unitTests/test_expand-methods.R
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/usr/lib/R/site-library/VariantAnnotation/unitTests/test_filterVcf.R
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/usr/lib/R/site-library/VariantAnnotation/unitTests/test_genotypeToSnpMatrix.R
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/usr/lib/R/site-library/VariantAnnotation/unitTests/test_isSNV.R
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/usr/lib/R/site-library/VariantAnnotation/unitTests/test_readVcf-methods.R
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/usr/lib/R/site-library/VariantAnnotation/unitTests/test_scanVcf.R
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/usr/lib/R/site-library/VariantAnnotation/unitTests/test_snpSummary.R
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/usr/lib/R/site-library/VariantAnnotation/unitTests/test_summarizeVariants-methods.R
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/usr/lib/R/site-library/VariantAnnotation/unitTests/test_writeVcf-methods.R
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